BAC Information

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BAC

Clone NameB6Ng01-027K02
Chromosome8 (Build37)13 (Build37)
Map Location 58,966,155 - 58,967,15016,599,542 - 16,600,069
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneGm1153, EG664808, EG664818, EG664834, EG664859, EG664876, LOC100040356, LOC664916, Adam29, Glra3, LOC664812, Hpgd, LOC664948
Downstream geneBC088983, Fbxo8, LOC100040431, EG624433, LOC654355, LOC100040515, Hand2, Scrg1, Sap30
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027K02.bB6Ng01-027K02.g
ACCDH858325DH858326
length989522
definitionDH858325|Mus musculus domesticus DNA, BAC clone: B6Ng01-027K02, 5' end.DH858326|Mus musculus domesticus DNA, BAC clone: B6Ng01-027K02, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(58,966,155 - 58,967,150)(16,599,542 - 16,600,069)
sequence
gaattctcatgacaggcctgtgacaaaataaatgtaaaggtatagatgag
ctaatttttataagaaaaaatgaaattcaccaatattacaaaacttcaac
tgtaaaaaataaaaagaagaaaagaaaaataaaatccatttttccttgcc
agcccttgctaccggaatggtgacactaagacgatttgttcattattaaa
tatgttgtccacaagctttggctcattccctgaatagctcctaacttatt
gaaactattctttatctaccacttagttagttcttttcagttccccgtcc
atttctttctttgtgtctcctcagcattccctcagcttctctctctaatc
tctctcagtatctctccttattctctcatgagttcagctacgtacgcctt
tacttccatctcccccaggttctgggcaaatctcccttttattctctcac
tatttcccagaatcctctctcttcctgacattgtcccacctcctctttcc
tgcctcagctcattggccatcatcttttttattgacaggtgatgcttata
agagattttttctacagtcaactaggaaaaaacacagaaagttatttagt
attttaaaacacctcccccccccccattttaaaaaaaaattcataccaga
tgtttcctttaggtaaggatttgaacagcgaatcagtagatggcggagga
agtattttggggagagacatccacaattacatcttggctgggcttgatca
gctccctataggaccttagccatttttatgaagttaaactaatttaactt
aaaatgaaatttaacttttagggtgaacttacacgtcccaaatcctgaat
gaattttccaatttatcccaagtccatttctgcaaaacattattgaaagg
aattcatgagctgagtatttggtgcattgttatgcaaatgtttattataa
catttacttctaaaatctaacgtatgtataccattttcc
caagctcttcatttaaaaattcatatcagatttcagatactgaagtttca
ggttttagagactattgtatatactaagaaaggagtaatttttcttttca
cttaatccagcaacttttgggggtaatgccagtagtttataatgagacat
cttgctgtcttaagaagatatggcagaatatagaagtggatgctcacggt
catccattggactgagcacagggtccccaatgaaggagctagagaaagta
cccaaggagctgaaggggttttcatccccataggaggaacaatcatatga
actaaccagtacccccagagctccctgggactaatccaccaatcaaagaa
aatacatggtggaacttgtgtcactagctgcatatgtagcagaggatggc
ctagttagtcatcaatgggaggagaggaccttgatcttgtgaaggttcta
tgccccagtataggggaatgccagggccaggaagcaggagtgggtgggtt
gggtagcaggggaagtgggtag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_58966155_58967150
seq2: B6Ng01-027K02.b_42_1030

seq1  GAATTCTCATGACAGGCCTGTGACAAAATAAATGTAAAGGTATAGATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCATGACAGGCCTGTGACAAAATAAATGTAAAGGTATAGATGAG  50

seq1  CTAATTTTTATAAGAAAAAATGAAATTCACCAATATTACAAAACTTCAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTTTATAAGAAAAAATGAAATTCACCAATATTACAAAACTTCAAC  100

seq1  TGTAAAAAATAAAAAGAAGAAAAGAAAAATAAAATCCATTTTTCCTTGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAAAAATAAAAAGAAGAAAAGAAAAATAAAATCCATTTTTCCTTGCC  150

seq1  AGCCCTTGCTACCGGAATGGTGACACTAAGACGATTTGTTCATTATTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTTGCTACCGGAATGGTGACACTAAGACGATTTGTTCATTATTAAA  200

seq1  TATGTTGTCCACAAGCTTTGGCTCATTCCCTGAATAGCTCCTAACTTATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTGTCCACAAGCTTTGGCTCATTCCCTGAATAGCTCCTAACTTATT  250

seq1  GAAACTATTCTTTATCTACCACTTAGTTAGTTCTTTTCAGTTCCCCGTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTATTCTTTATCTACCACTTAGTTAGTTCTTTTCAGTTCCCCGTCC  300

seq1  ATTTCTTTCTTTGTGTCTCCTCAGCATTCCCTCAGCTTCTCTCTCTAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTCTTTGTGTCTCCTCAGCATTCCCTCAGCTTCTCTCTCTAATC  350

seq1  TCTCTCAGTATCTCTCCTTATTCTCTCATGAGTTCAGCTACGTACGCCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCAGTATCTCTCCTTATTCTCTCATGAGTTCAGCTACGTACGCCTT  400

seq1  TACTTCCATCTCCCCCAGGTTCTGGGCAAATCTCCCTTTTATTCTCTCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCATCTCCCCCAGGTTCTGGGCAAATCTCCCTTTTATTCTCTCAC  450

seq1  TATTTCCCAGAATCCTCTCTCTTCCTGACATTGTCCCACCTCCTCTTTCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCCCAGAATCCTCTCTCTTCCTGACATTGTCCCACCTCCTCTTTCC  500

seq1  TGCCTCAGCTCATTGGCCATCATCTTTTTTATTGACAGGTGATGCTTATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCAGCTCATTGGCCATCATCTTTTTTATTGACAGGTGATGCTTATA  550

seq1  AGAGATTTTTTCTACAGTCAACTAGGAAAAAACACAGAAAGTTATTTAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATTTTTTCTACAGTCAACTAGGAAAAAACACAGAAAGTTATTTAGT  600

seq1  ATTTTAAAACACCTCCCCCCCCCCCATTTTAAAAAAAAATTCATACCAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTAAAACACCTCCCCCCCCCCCATTTTAAAAAAAAATTCATACCAGA  650

seq1  TGTTTCCTTTAGGTAAGGATTTGAACAGCGAATCAGTAGATGGCGGAGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCTTTAGGTAAGGATTTGAACAGCGAATCAGTAGATGGCGGAGGA  700

seq1  AGTATTTT-GGGAGAGACATCCACAATTACATCTTGGCTGGGCTTGATCA  749
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTTGGGGAGAGACATCCACAATTACATCTTGGCTGGGCTTGATCA  750

seq1  GCTCCCTATAGGACCTTAGCCATTTTTATGAAGTTAAACTAATTTAACTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCCTATAGGACCTTAGCCATTTTTATGAAGTTAAACTAATTTAACTT  800

seq1  AAAATGAAATTTAACTTTTAGGGTGAACTTACACGTCCCAAATCCTGAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAAATTTAACTTTTAGGGTGAACTTACACGTCCCAAATCCTGAAT  850

seq1  GAATTTTCC-ATTTATCCCAAGTCCATTTCTGCAAAACAGTATTGAAAGG  898
      ||||||||| ||||||||||||||||||||||||||||| ||||||||||
seq2  GAATTTTCCAATTTATCCCAAGTCCATTTCTGCAAAACATTATTGAAAGG  900

seq1  AATTCATGAGCTGAAGTATTTGGGGAATTTGTTATGGCAAATGTTTTATT  948
      ||||||||||||| ||||||||| | | ||||||| ||||||| ||||||
seq2  AATTCATGAGCTG-AGTATTTGGTGCA-TTGTTAT-GCAAATG-TTTATT  946

seq1  ATAAACATTTACCTCCTAAAAATCTAACGTAATGTATTACCATTTTCC  996
      || ||||||||| ||   |||||||||||| ||||| |||||||||||
seq2  AT-AACATTTACTTC--TAAAATCTAACGT-ATGTA-TACCATTTTCC  989

seq1: chr13_16599542_16600069
seq2: B6Ng01-027K02.g_68_595

seq1  GAATTCCAAGCTCTTCATTTAAAAATTCATATCAGATTTCAGATACTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAGCTCTTCATTTAAAAATTCATATCAGATTTCAGATACTGAA  50

seq1  GTTTCAGGTTTTAGAGACTATTGTATATACTAAGAAAGGAGTAATTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCAGGTTTTAGAGACTATTGTATATACTAAGAAAGGAGTAATTTTTC  100

seq1  TTTTCACTTAATCCAGCAACTTTTGGGGGTAATGCCAGTAGTTTATAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACTTAATCCAGCAACTTTTGGGGGTAATGCCAGTAGTTTATAATG  150

seq1  AAACATCTTGCTGTCTTAAGAAGATATGGCAGAATATAGAAGTGGATGCT  200
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATCTTGCTGTCTTAAGAAGATATGGCAGAATATAGAAGTGGATGCT  200

seq1  CACGGTCATCCATTGGACTGAGCACAGGGTCCCCAATGAAGGAGCTAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGGTCATCCATTGGACTGAGCACAGGGTCCCCAATGAAGGAGCTAGAG  250

seq1  AAAGTACCCAAGGAGCTGAAGGGGTTTTCATCCCCATAGGAGGAACAATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTACCCAAGGAGCTGAAGGGGTTTTCATCCCCATAGGAGGAACAATC  300

seq1  ATATGAACTAACCAGTACCCCCAGAGCTCCCTGGGACTAATCCACCAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAACTAACCAGTACCCCCAGAGCTCCCTGGGACTAATCCACCAATC  350

seq1  AAAGAAAATACATGGTGGAACTTGTGTCACTAGCTGCATATGTAGCAGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAAAATACATGGTGGAACTTGTGTCACTAGCTGCATATGTAGCAGAG  400

seq1  GATGGCCTAGTTAGTCATCAATGGGAGGAGAGGACCTTGATCTTGTGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGCCTAGTTAGTCATCAATGGGAGGAGAGGACCTTGATCTTGTGAAG  450

seq1  GTTCTATGCCCCAGTATAGGGGAATGCCAGGGCCAGGAAGCAGGAGTGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTATGCCCCAGTATAGGGGAATGCCAGGGCCAGGAAGCAGGAGTGGG  500

seq1  TGGGTTGGGTAGCAGGGGAAGTGGGTAG  528
      ||||||||||||||||||||||||||||
seq2  TGGGTTGGGTAGCAGGGGAAGTGGGTAG  528