BAC Information

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BAC

Clone NameB6Ng01-028L14
Chromosome8 (Build37)
Map Location 58,970,293 - 58,971,031
singlet/doubletsinglet
Overlap genenone
Upstream geneGm1153, EG664808, EG664818, EG664834, EG664859, EG664876, LOC100040356, LOC664916, Adam29, Glra3, LOC664812, Hpgd, LOC664948
Downstream geneBC088983, Fbxo8, LOC100040431, EG624433, LOC654355, LOC100040515, Hand2, Scrg1, Sap30
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-028L14.bB6Ng01-028L14.g
ACCDH859129DH859130
length1,175739
definitionDH859129|Mus musculus domesticus DNA, BAC clone: B6Ng01-028L14, 5' end.DH859130|Mus musculus domesticus DNA, BAC clone: B6Ng01-028L14, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
gagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacagagacggagtttggagctgagatga
aaggatagaccatgtagagactgccatagccagggatccaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttattgaaa
ggacgcagatgtagctgtctcttgtgagactatgccggggcccagcaaac
acagaagtggatgctcacagtcagctaatggatggatcatagggctccca
tggaagagctagagaaagtagccaaggagctaaagggatctgcaatcctt
ataggtggaccaccattatgagctaccagtacctcggagcttcttgactc
tagctgctaatatcaaagatggcttagtcgcattcactggaaagagagtc
atgacttgcactttaatgctcagtacaggcatatccagggctcaaagggg
gattggtggtcagggtagtgtcgtc
gaattcattaattaaatataacttttcaaatttggttacctagaattaat
cataatgctaccctgaattttttattttttttgagatagtgtttctctgt
gtagctctggctgtcctggaactcactcggtagaccaagctggcctcgaa
ctcaaaaatctacctgcctctgcctcctaagtgctgggattaaaggcata
caccaccacctcctgctactctgaattcttacagaaaatttcttatgctt
tgtgagtttggatttgaggaataaaaaaaaaataagtacagaaataaaaa
ttaatacctctagttccataaacttaccatcttgcaaattatgaattact
aataaggaatctgactggatacattgacagcaatgtatagctgaggatgt
ataggtgtttgttaatatctccttaggagaagtcattgattggagcccta
atggtgaggtcctctaatcctcgagtactatatttgccaggaggctgccc
cagcattggttctccctagaaagcagccatggaggtggagcattggcaga
gggcaaaacttggttttgcaagagtaaagtttcttagtataaataatatt
tactctccttgattctttgtttctttgagaccagatggcttcagacgaat
taataattgttgattaacagcaagggggtggaaaagcgagttattgctag
tgttcctttctctagagggctacaacccccctcttgcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_58970293_58971031
seq2: B6Ng01-028L14.g_67_805 (reverse)

seq1  TAGCAAGAGAGGGGTTTCTAGCCATCTAGAGAAGGGAACACTAGCAATAA  50
      ||||||||| |||| || ||||| ||||||||| ||||||||||||||||
seq2  TAGCAAGAG-GGGGGTTGTAGCCCTCTAGAGAAAGGAACACTAGCAATAA  49

seq1  CTCGC-TTTCCACCCCCTTGCTGTTAATCAACAAGTACTAATTCGTCTGA  99
      ||||| |||||||||||||||||||||||||||| || ||||||||||||
seq2  CTCGCTTTTCCACCCCCTTGCTGTTAATCAACAATTATTAATTCGTCTGA  99

seq1  AGCCATCTGGTCTCAAAGAAACAAAGAATCAAGGAGAGTAAATATTATTT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCATCTGGTCTCAAAGAAACAAAGAATCAAGGAGAGTAAATATTATTT  149

seq1  ATACTAAGAAACTTTACTCTTGCAAAACCAAGTTTTGCCCTCTGCCAATG  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTAAGAAACTTTACTCTTGCAAAACCAAGTTTTGCCCTCTGCCAATG  199

seq1  CTCCACCTCCATGGCTGCTTTCTAGGGAGAACCAATGCTGGGGCAGCCTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACCTCCATGGCTGCTTTCTAGGGAGAACCAATGCTGGGGCAGCCTC  249

seq1  CTGGCAAATATAGTACTCGAGGATTAGAGGACCTCACCATTAGGGCTCCA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCAAATATAGTACTCGAGGATTAGAGGACCTCACCATTAGGGCTCCA  299

seq1  ATCAATGACTTCTCCTAAGGAGATATTAACAAACACCTATACATCCTCAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATGACTTCTCCTAAGGAGATATTAACAAACACCTATACATCCTCAG  349

seq1  CTATACATTGCTGTCAATGTATCCAGTCAGATTCCTTATTAGTAATTCAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACATTGCTGTCAATGTATCCAGTCAGATTCCTTATTAGTAATTCAT  399

seq1  AATTTGCAAGATGGTAAGTTTATGGAACTAGAGGTATTAATTTTTATTTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCAAGATGGTAAGTTTATGGAACTAGAGGTATTAATTTTTATTTC  449

seq1  TGTACTTATTTTTTTTTTATTCCTCAAATCCAAACTCACAAAGCATAAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTACTTATTTTTTTTTTATTCCTCAAATCCAAACTCACAAAGCATAAGA  499

seq1  AATTTTCTGTAAGAATTCAGAGTAGCAGGAGGTGGTGGTGTATGCCTTTA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCTGTAAGAATTCAGAGTAGCAGGAGGTGGTGGTGTATGCCTTTA  549

seq1  ATCCCAGCACTTAGGAGGCAGAGGCAGGTAGATTTTTGAGTTCGAGGCCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGCACTTAGGAGGCAGAGGCAGGTAGATTTTTGAGTTCGAGGCCA  599

seq1  GCTTGGTCTACCGAGTGAGTTCCAGGACAGCCAGAGCTACACAGAGAAAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGTCTACCGAGTGAGTTCCAGGACAGCCAGAGCTACACAGAGAAAC  649

seq1  ACTATCTCAAAAAAAATAAAAAATTCAGGGTAGCATTATGATTAATTCTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATCTCAAAAAAAATAAAAAATTCAGGGTAGCATTATGATTAATTCTA  699

seq1  GGTAACCAAATTTGAAAAGTTATATTTAATTAATGAATTC  739
      ||||||||||||||||||||||||||||||||||||||||
seq2  GGTAACCAAATTTGAAAAGTTATATTTAATTAATGAATTC  739