BAC Information

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BAC

Clone NameB6Ng01-029I06
Chromosome8 (Build37)
Map Location 59,689,912 - 59,826,383
singlet/doubletdoublet
Overlap geneLOC100040515, Hand2
Upstream geneHpgd, LOC664948, BC088983, Fbxo8, LOC100040431, EG624433, LOC654355
Downstream geneScrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634, LOC100040711
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-029I06.bB6Ng01-029I06.g
ACCDH859696DH859697
length337897
definitionDH859696|Mus musculus domesticus DNA, BAC clone: B6Ng01-029I06, 5' end.DH859697|Mus musculus domesticus DNA, BAC clone: B6Ng01-029I06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,689,912 - 59,690,248)(59,825,487 - 59,826,383)
sequence
aagtcaccagccttgtgaaaaagtgccctcacccactgagctatccccct
agccttcactcagcttacccatttagatgattcgccatgtctgaccacct
aaggcatttttgctccaagtaaaactcaagcattcattatgatttaggat
tagtttacggatcattatttaggcatacattctttaactataataattcc
atttaaaattgtatcattaataaattaaagaccttttggttatatacctg
ggggggggggttggggctgcctgttcaccacaggttcatcaccattagat
ttttttgtttttctttttttttgggtgggggggggtt
gaattctcctcctggaggatggacagggaaaccatcagctcaggtaagca
tgggagctgtggtctggagaattgaaagaaggaaaatcatctccaaatgc
aaccagccagatgtgggcagaagctgggaagagaagaggagatctgaaaa
tccccaagttggcaggcagcgcaccggaaggtgtgggaaggtatgggaag
cagtcaacatttggagccttggaatcagaagttcgggcagctgttagata
acttcctgatttgcaataaagttcacatgaccaagaagatgttttccatg
ttcggttgccgggttcctttcctcactctcttacaagcttaggggagtcc
tgattgaatggtggtactgaccagatgtggacctaagtccttgaggctga
cactgtgtttgcctacaggggcagtggcaagcttactggtggttgtcttc
tcagacaactacccccctccccaaataaatcctggctgttccctttctaa
ccttcagcctatatggttcccaaccctccgcaaactgtctaaagtttaaa
atggaaaaaaaaatcatctatgtgaagttccaggcggcttcctaggccgg
cgccttccggctgcagcagccttgttgctggaatcatgcataattagggt
ctgaccactatggaaatacaaacaagatgtttactttccttaggaagaga
aaaaaaaaatgaaaaggaggcctggcgttcaaagaggggtgccttatgaa
gcagcgcacgtttaaagagcacaatacctgtgtctttgaactcttccagg
agggctgaggacagagaggctcagttctgatctaggggtcaccacttagc
ctgtgtttctcagtgcagacctgggatcctgggagtgggggtggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_59689912_59690248
seq2: B6Ng01-029I06.b_50_386

seq1  AAGTCACCAGCCTTGTGAAAAAGTGCCCTCACCCACTGAGCTATCCCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCACCAGCCTTGTGAAAAAGTGCCCTCACCCACTGAGCTATCCCCCT  50

seq1  AGCCTTCACTCAGCTTACCCATTTAGATGATTCGCCATGTCTGACCACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCACTCAGCTTACCCATTTAGATGATTCGCCATGTCTGACCACCT  100

seq1  AAGGCATTTTTGCTCCAAGTAAAACTCAAGCATTCATTATGATTTAGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCATTTTTGCTCCAAGTAAAACTCAAGCATTCATTATGATTTAGGAT  150

seq1  TAGTTTACGGATCATTATTTAGGCATACATTCTTTAACTATAATAATTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTACGGATCATTATTTAGGCATACATTCTTTAACTATAATAATTCC  200

seq1  ATTTAAAATTGTATCATTAATAAATTAAAGACCTTTTGGTTATATACCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAAATTGTATCATTAATAAATTAAAGACCTTTTGGTTATATACCTG  250

seq1  GGGGGGGGGGTTGGGGCTGCCTGTTCACCACAGGTTCATCACCATTAGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGGGTTGGGGCTGCCTGTTCACCACAGGTTCATCACCATTAGAT  300

seq1  TTTTTTGTTTTTCTTTTTTTTTGGGTGGGGGGGGGTT  337
      |||||||||||||||||||||||||||||||||||||
seq2  TTTTTTGTTTTTCTTTTTTTTTGGGTGGGGGGGGGTT  337

seq1: chr8_59825487_59826383
seq2: B6Ng01-029I06.g_68_964 (reverse)

seq1  CCTCCACCCCCACTCCCAGGATCCCAGGTCTGCACTGAGAAACACAGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCACCCCCACTCCCAGGATCCCAGGTCTGCACTGAGAAACACAGGCT  50

seq1  AAGTGGTGACCCCTAGATCAGAACTGAGCCTCTCTGTCCTCAGCCCTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGGTGACCCCTAGATCAGAACTGAGCCTCTCTGTCCTCAGCCCTCCT  100

seq1  GGAAGAGTTCAAAGACACAGGTATTGTGCTCTTTAAACGTGCGCTGCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGTTCAAAGACACAGGTATTGTGCTCTTTAAACGTGCGCTGCTTC  150

seq1  ATAAGGCACCCCTCTTTGAACGCCAGGCCTCCTTTTCATTTTTTTTTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGCACCCCTCTTTGAACGCCAGGCCTCCTTTTCATTTTTTTTTTCT  200

seq1  CTTCCTAAGGAAAGTAAACATCTTGTTTGTATTTCCATAGTGGTCAGACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTAAGGAAAGTAAACATCTTGTTTGTATTTCCATAGTGGTCAGACC  250

seq1  CTAATTATGCATGATTCCAGCAACAAGGCTGCTGCAGCCGGAAGGCGCCG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTATGCATGATTCCAGCAACAAGGCTGCTGCAGCCGGAAGGCGCCG  300

seq1  GCCTAGGAAGCCGCCTGGAACTTCACATAGATGATTTTTTTTTCCATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGGAAGCCGCCTGGAACTTCACATAGATGATTTTTTTTTCCATTTT  350

seq1  AAACTTTAGACAGTTTGCGGAGGGTTGGGAACCATATAGGCTGAAGGTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTAGACAGTTTGCGGAGGGTTGGGAACCATATAGGCTGAAGGTTA  400

seq1  GAAAGGGAACAGCCAGGATTTATTTGGGGAGGGGGGTAGTTGTCTGAGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGGAACAGCCAGGATTTATTTGGGGAGGGGGGTAGTTGTCTGAGAA  450

seq1  GACAACCACCAGTAAGCTTGCCACTGCCCCTGTAGGCAAACACAGTGTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAACCACCAGTAAGCTTGCCACTGCCCCTGTAGGCAAACACAGTGTCA  500

seq1  GCCTCAAGGACTTAGGTCCACATCTGGTCAGTACCACCATTCAATCAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCAAGGACTTAGGTCCACATCTGGTCAGTACCACCATTCAATCAGGA  550

seq1  CTCCCCTAAGCTTGTAAGAGAGTGAGGAAAGGAACCCGGCAACCGAACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTAAGCTTGTAAGAGAGTGAGGAAAGGAACCCGGCAACCGAACAT  600

seq1  GGAAAACATCTTCTTGGTCATGTGAACTTTATTGCAAATCAGGAAGTTAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACATCTTCTTGGTCATGTGAACTTTATTGCAAATCAGGAAGTTAT  650

seq1  CTAACAGCTGCCCGAACTTCTGATTCCAAGGCTCCAAATGTTGACTGCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAGCTGCCCGAACTTCTGATTCCAAGGCTCCAAATGTTGACTGCTT  700

seq1  CCCATACCTTCCCACACCTTCCGGTGCGCTGCCTGCCAACTTGGGGATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATACCTTCCCACACCTTCCGGTGCGCTGCCTGCCAACTTGGGGATTT  750

seq1  TCAGATCTCCTCTTCTCTTCCCAGCTTCTGCCCACATCTGGCTGGTTGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATCTCCTCTTCTCTTCCCAGCTTCTGCCCACATCTGGCTGGTTGCA  800

seq1  TTTGGAGATGATTTTCCTTCTTTCAATTCTCCAGACCACAGCTCCCATGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAGATGATTTTCCTTCTTTCAATTCTCCAGACCACAGCTCCCATGC  850

seq1  TTACCTGAGCTGATGGTTTCCCTGTCCATCCTCCAGGAGGAGAATTC  897
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTGAGCTGATGGTTTCCCTGTCCATCCTCCAGGAGGAGAATTC  897