BAC Information

Click to search

BAC

Clone NameB6Ng01-032E11
Chromosome8 (Build37)
Map Location 117,938,581 - 118,064,410
singlet/doubletdoublet
Overlap genenone
Upstream geneClec3a, Wwox
Downstream geneMaf, LOC384868, LOC668233, Dynlrb2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-032E11.bB6Ng01-032E11.g
ACCDH861663DH861664
length102388
definitionDH861663|Mus musculus domesticus DNA, BAC clone: B6Ng01-032E11, 5' end.DH861664|Mus musculus domesticus DNA, BAC clone: B6Ng01-032E11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(118,064,309 - 118,064,410)(117,938,581 - 117,938,974)
sequence
actggctcttccaggctgctccaaggaaaatgaggagggaaaggaaagaa
ctgaaaaaggaagaaagggaaggatgtgggggaaaggaaggtgggagggg
aa
tttgtacatacatacatacatacatacatacacacacacacacacacaca
cacacacacacacacacacactcacactcacactcacactggtctgtctc
cttgtgaaaagttcttatgggttaggttctctatgccaggcagtggctaa
agacaagtcagagtttgacaaactcctcttcaatgctgctggctagccct
tctacccagggtgcctctttctctaaaatctgctatgttctaactagcat
atccgatgagttccggctcctttacttaaggagctgactcttgtcttcca
ggagaagattgctttctctacccaatcaattcctagcactaagcagagaa
gaaaaatcccggagactggagggggatgggtggtggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_118064309_118064410
seq2: B6Ng01-032E11.b_53_154 (reverse)

seq1  TTCCCCTCCCACCTTCCTTTCCCCCACATCCTTCCCTTTCTTCCTTTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTCCCACCTTCCTTTCCCCCACATCCTTCCCTTTCTTCCTTTTTC  50

seq1  AGTTCTTTCCTTTCCCTCCTCATTTTCCTTGGAGCAGCCTGGAAGAGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTTTCCTTTCCCTCCTCATTTTCCTTGGAGCAGCCTGGAAGAGCCA  100

seq1  GT  102
      ||
seq2  GT  102

seq1: chr8_117938581_117938974
seq2: B6Ng01-032E11.g_71_464

seq1  GAATTCTTTGTACATACATACATACATACATACATACACACACACACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTGTACATACATACATACATACATACATACACACACACACACA  50

seq1  CACACACACACACACACACACACACACTCACACTCACACTCACACTGGTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACTCACACTCACACTCACACTGGTC  100

seq1  TGTCTCCTTGTGAAAAGTTCTTATGGGTTAGGTTCTCTATGCCAGGCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCCTTGTGAAAAGTTCTTATGGGTTAGGTTCTCTATGCCAGGCAGT  150

seq1  GGCTAAAGACAAGTCAGAGTTTGACAAACTCCTCTTCAATGCTGCTGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAAAGACAAGTCAGAGTTTGACAAACTCCTCTTCAATGCTGCTGGCT  200

seq1  AGCCCTTCTACCCAGGGTGCCTCTTTCTCTAAAATCTGCTATGTTCTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTTCTACCCAGGGTGCCTCTTTCTCTAAAATCTGCTATGTTCTAAC  250

seq1  TAGCATATCCGATGAGTTCCGGCTCCTTTACTTAAGGAGCTGACTCTTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATATCCGATGAGTTCCGGCTCCTTTACTTAAGGAGCTGACTCTTGT  300

seq1  CTTCCAGGAGAAGATTGCTTTCTCTACCCAATCAATTCCTAGCACTAAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGGAGAAGATTGCTTTCTCTACCCAATCAATTCCTAGCACTAAGC  350

seq1  AGAGAAGAAAAATCCCGGAGACTGGAGGGGGATGGGTGGTGGAT  394
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGAAAAATCCCGGAGACTGGAGGGGGATGGGTGGTGGAT  394