BAC Information

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BAC

Clone NameB6Ng01-033O07
Chromosome8 (Build37)
Map Location 115,979,468 - 116,106,091
singlet/doubletdoublet
Overlap genenone
Upstream geneCntnap4, LOC100042061
Downstream geneMon1b, 4930481F22Rik, Adamts18, Nudt7, AI427515, Clec3a, Wwox
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-033O07.bB6Ng01-033O07.g
ACCDH862816DH862817
length804781
definitionDH862816|Mus musculus domesticus DNA, BAC clone: B6Ng01-033O07, 5' end.DH862817|Mus musculus domesticus DNA, BAC clone: B6Ng01-033O07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(116,105,290 - 116,106,091)(115,979,468 - 115,980,245)
sequence
gaattcaaggaatttcctcaaggtcgtatttttaagtaaagtacatgggt
attttctttcaatgtatgtctactacatagaattaacggcgcagagcttg
ttgtcagcgacgtctaggctttacgaattcatacgaaaacatcttgccct
ctcgacctggggaatgcatctcattactagcccactgggacgagcacatt
taggaaatggtttgagctgtgcttccctgagtcagggtgactgttaagct
aatccttaggggtctactgtgatgatagggaggccactgtgagcagaata
ttttgaccctgggctgacctgccggctccaattacaggaccgtctttagc
gtgatggatggagtagcgacatcatacctcccagcccgtcctgtgagacc
agctctttaacctctgcctcctccccagggaaaggcatagttctgctctc
cctcatcttcagtgtgtctctgatgcccaagacctccaagctacctgggg
acacagtgaacctcatcttgtgctatgacagtctattgcttgggaaagag
actgtctctcattgctctgtttctagaccaattaggactcttgggcaaat
ggagaaagcctgtttcaggtgtctctgaagtgtgtctcatgacaggcagg
gtgggaaatacctgaaccccaggaggctggaattgggtgctgccagagcc
caggaagcctcccttttggcttttcgcaccctgtccctgcttccacatac
gttttcgtttttcatgacgcttgcctctgctcccagagtttcctgcttgt
tagt
gaattcagagaagttaaaaatagttatcattcacttcacatgtctatgta
acttgaaatgtatttcaggtacttggaaatgatatttttcttttttgaat
taataaatttatttgtgtatatgtgtttgtctgtgtgcatatatatgcat
gaaaccccaaagatcagaagaaagtgccaggattcctggaactggagtat
caggcaactgcaagccaaccaatgtggatgctgggcacccaacccatttg
caaaagcagaacgctcttaactgttgagtcaccgttccaggcctaaaatt
tgtaattgtttttcattagatgtaagataaaaataactttaaaaaatatt
caatgtatatacaacaaacattattgtatgaatatactaggtaacagaaa
gaatatagattacaactttttgtaaaagcaagataaagatgatatgttga
agacataagaagactttaacttcttcccgaatcccatttttaaagggtgg
tttcagacactgagacatgaaaacgaagaacagatgaagaagtgagaact
gggtagaaatgatacaaccgtcatggacttgactgtcttgagaaggctga
gcttgctgttgtctctggaataatgacaaactgtacagttcaaaagaaaa
aaaaaatcttggaattgtttgccatgaaaagaagttactattggtggggc
tagatatatttaaccattttgtgaaaactacagagtgtacagggtgctta
aatacgtttttgctctatcagtgtgtacgat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_116105290_116106091
seq2: B6Ng01-033O07.b_44_847 (reverse)

seq1  ACTAACAAGCAGGAAACTCTGGGAGCAGAGGCAAGCGTCATG-AAAACGA  49
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ACTAACAAGCAGGAAACTCTGGGAGCAGAGGCAAGCGTCATGAAAAACGA  50

seq1  AAACGTATGTGGAAGCAGGGACAGGGTGCGAAAAGCC-AAAGGGAGGCTT  98
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AAACGTATGTGGAAGCAGGGACAGGGTGCGAAAAGCCAAAAGGGAGGCTT  100

seq1  CCTGGGCTCTGGCAGCACCCAATTCCAGCCTCCTGGGGTTCAGGTATTTC  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGCTCTGGCAGCACCCAATTCCAGCCTCCTGGGGTTCAGGTATTTC  150

seq1  CCACCCTGCCTGTCATGAGACACACTTCAGAGACACCTGAAACAGGCTTT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCTGCCTGTCATGAGACACACTTCAGAGACACCTGAAACAGGCTTT  200

seq1  CTCCATTTGCCCAAGAGTCCTAATTGGTCTAGAAACAGAGCAATGAGAGA  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATTTGCCCAAGAGTCCTAATTGGTCTAGAAACAGAGCAATGAGAGA  250

seq1  CAGTCTCTTTCCCAAGCAATAGACTGTCATAGCACAAGATGAGGTTCACT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTCTTTCCCAAGCAATAGACTGTCATAGCACAAGATGAGGTTCACT  300

seq1  GTGTCCCCAGGTAGCTTGGAGGTCTTGGGCATCAGAGACACACTGAAGAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCCCAGGTAGCTTGGAGGTCTTGGGCATCAGAGACACACTGAAGAT  350

seq1  GAGGGAGAGCAGAACTATGCCTTTCCCTGGGGAGGAGGCAGAGGTTAAAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGAGAGCAGAACTATGCCTTTCCCTGGGGAGGAGGCAGAGGTTAAAG  400

seq1  AGCTGGTCTCACAGGACGGGCTGGGAGGTATGATGTCGCTACTCCATCCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGTCTCACAGGACGGGCTGGGAGGTATGATGTCGCTACTCCATCCA  450

seq1  TCACGCTAAAGACGGTCCTGTAATTGGAGCCGGCAGGTCAGCCCAGGGTC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGCTAAAGACGGTCCTGTAATTGGAGCCGGCAGGTCAGCCCAGGGTC  500

seq1  AAAATATTCTGCTCACAGTGGCCTCCCTATCATCACAGTAGACCCCTAAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATTCTGCTCACAGTGGCCTCCCTATCATCACAGTAGACCCCTAAG  550

seq1  GATTAGCTTAACAGTCACCCTGACTCAGGGAAGCACAGCTCAAACCATTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAGCTTAACAGTCACCCTGACTCAGGGAAGCACAGCTCAAACCATTT  600

seq1  CCTAAATGTGCTCGTCCCAGTGGGCTAGTAATGAGATGCATTCCCCAGGT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATGTGCTCGTCCCAGTGGGCTAGTAATGAGATGCATTCCCCAGGT  650

seq1  CGAGAGGGCAAGATGTTTTCGTATGAATTCGTAAAGCCTAGACGTCGCTG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGAGGGCAAGATGTTTTCGTATGAATTCGTAAAGCCTAGACGTCGCTG  700

seq1  ACAACAAGCTCTGCGCCGTTAATTCTATGTAGTAGACATACATTGAAAGA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAAGCTCTGCGCCGTTAATTCTATGTAGTAGACATACATTGAAAGA  750

seq1  AAATACCCATGTACTTTACTTAAAAATACGACCTTGAGGAAATTCCTTGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACCCATGTACTTTACTTAAAAATACGACCTTGAGGAAATTCCTTGA  800

seq1  ATTC  802
      ||||
seq2  ATTC  804

seq1: chr8_115979468_115980245
seq2: B6Ng01-033O07.g_67_847

seq1  GAATTCAGAGAAGTTAAAAATAGTTATCATTCACTTCACATGTCTATGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGAAGTTAAAAATAGTTATCATTCACTTCACATGTCTATGTA  50

seq1  ACTTGAAATGTATTTCAGGTACTTGGAAATGATATTTTTCTTTTTTGAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGAAATGTATTTCAGGTACTTGGAAATGATATTTTTCTTTTTTGAAT  100

seq1  TAATAAATTTATTTGTGTATATGTGTTTGTCTGTGTGCATATATATGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAAATTTATTTGTGTATATGTGTTTGTCTGTGTGCATATATATGCAT  150

seq1  GAAACCCCAAAGATCAGAAGAAAGTGCCAGGATTCCTGGAACTGGAGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCCCAAAGATCAGAAGAAAGTGCCAGGATTCCTGGAACTGGAGTAT  200

seq1  CAGGCAACTGCAAGCCAACCAATGTGGATGCTGGGCACCCAACCCATTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAACTGCAAGCCAACCAATGTGGATGCTGGGCACCCAACCCATTTG  250

seq1  CAAAAGCAGAACGCTCTTAACTGTTGAGTCACCGTTCCAGGCCTAAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGCAGAACGCTCTTAACTGTTGAGTCACCGTTCCAGGCCTAAAATT  300

seq1  TGTAATTGTTTTTCATTAGATGTAAGATAAAAATAACTTTAAAAAATATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATTGTTTTTCATTAGATGTAAGATAAAAATAACTTTAAAAAATATT  350

seq1  CAATGTATATACAACAAACATTATTGTATGAATATACTAGGTAACAGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTATATACAACAAACATTATTGTATGAATATACTAGGTAACAGAAA  400

seq1  GAATATAGATTACAACTTTTTGTAAAAGCAAGATAAAGATGATATGTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATATAGATTACAACTTTTTGTAAAAGCAAGATAAAGATGATATGTTGA  450

seq1  AGACATAAGAAGACTTTAACTTCTTCCCGAATCCCATTTTTAAAGGGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACATAAGAAGACTTTAACTTCTTCCCGAATCCCATTTTTAAAGGGTGG  500

seq1  TTTCAGACACTGAGACATGAAAACGAAGAACAGATGAAGAAGTGAGAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGACACTGAGACATGAAAACGAAGAACAGATGAAGAAGTGAGAACT  550

seq1  GGGTAGAAATGATACAACCGTCATGGACTTGACTGTCTTGAGAAGGCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGAAATGATACAACCGTCATGGACTTGACTGTCTTGAGAAGGCTGA  600

seq1  GCTTGCTGTTGTCTCTGGAATAATGACAAACTGTACAGTTCAAAAG-AAA  649
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GCTTGCTGTTGTCTCTGGAATAATGACAAACTGTACAGTTCAAAAGAAAA  650

seq1  AAAAAATCTTGGAATTGTTTGCCATGAAAAGAAGTTACTATTGGTGGGGC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATCTTGGAATTGTTTGCCATGAAAAGAAGTTACTATTGGTGGGGC  700

seq1  TAGATATATTTAACCA-TTTGTGAACACTACAGAGTGTACA-GGTGCTTA  747
      |||||||||||||||| |||||||| ||||||||||||||| ||||||||
seq2  TAGATATATTTAACCATTTTGTGAAAACTACAGAGTGTACAGGGTGCTTA  750

seq1  AATACGTTTTTGCTCTATCAGTGTGTACGAT  778
      |||||||||||||||||||||||||||||||
seq2  AATACGTTTTTGCTCTATCAGTGTGTACGAT  781