BAC Information

Click to search

BAC

Clone NameB6Ng01-034M15
Chromosome10 (Build37)8 (Build37)
Map Location 4,103,715 - 4,104,16192,392,979 - 92,393,046
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneCnksr3, Oprm1, A130090K04Rik, LOC237252, LOC100041224
Downstream geneRgs17, Mtrf1l, Fbxo5, LOC666395, Vip, Myct1, Syne1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034M15.bB6Ng01-034M15.g
ACCDH863438DH863439
length446643
definitionDH863438|Mus musculus domesticus DNA, BAC clone: B6Ng01-034M15, 5' end.DH863439|Mus musculus domesticus DNA, BAC clone: B6Ng01-034M15, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(4,103,715 - 4,104,161)(92,392,979 - 92,393,046)
sequence
gaattcccttgggtcttatacaatattataaaatgggatttatcaggcgg
gcttatatattgtggggcagagagtccaacagctgttctctatacagcag
gaagccaagaccacaagagctctcagtccataaacaaagtgccttggcag
tctgaagccaatgagggaagtatggggttgtttaggatgtttctggtatt
gattccacattgatggcatgggaggatgacaacaaccaagagagatacag
atgctcagatgaagtgaagccctttttggtcctcagagacctttgcattc
aggccaccctttcaaagtgtcacttcgcacctcactctgccatgtctaga
aagagtctctcatacacaccctagataattcctcttgttaattctaagcc
caccacattgatggtcaagctgacagcaaccatcatacctgacatc
gaattcctgatttttccaagacttttatcatgaaggggtgttggattttg
ccaaatgctttctccacatctaacgagatgatcatgtgggttttgtcttt
gagtttgtttatatggtggatttgttgatggatttccatatattgaacca
tccctgtaaccctggtatggtatgaagcctacttgatcatgatggatgat
cattttgatgtgttcttcaattcagtttttgagaactttattgagtattt
ttgtataaatattcataagggaaattggtctgaagttctttctttgttgg
gcctttgtgtggttttggtaccagcataattgtggcttcatagaaccaat
tgggtatttttttcttctgtttttattttgtggaatagtttgaagagtat
gcgtattatgtcttctttgaaagtcttatagagttctgcactaaatccat
ctagtctttttgggggggtgttgggacactgttaatggctgcttctattt
ctttaagtgttgtgggactgattagatggtttatctgataccgatttaac
ttttggtaactggtatctgtttagaaaattgtccaattcatccatatttt
ccaagtttttttgttggtgttgtttttttgtttttgttttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr10_4103715_4104161
seq2: B6Ng01-034M15.b_31_477

seq1  GGAATTCCCTTGGGTCTTATACAATATTATAAAAGGGGATTTATCAGGCG  50
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GGAATTCCCTTGGGTCTTATACAATATTATAAAATGGGATTTATCAGGCG  50

seq1  GGCTTATATATTGTGGGGCAGAGAGTCCAACAGCTGTTCTCTATACAGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTATATATTGTGGGGCAGAGAGTCCAACAGCTGTTCTCTATACAGCA  100

seq1  GGAAGCCAAGACCACAAGAGCTCTCAGTCCATAAACAAAGTGCCTTGGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCCAAGACCACAAGAGCTCTCAGTCCATAAACAAAGTGCCTTGGCA  150

seq1  GTCTGAAGCCAATGAGGGAAGTATGGGGTTGTTTAGGATGTTTCTGGTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAAGCCAATGAGGGAAGTATGGGGTTGTTTAGGATGTTTCTGGTAT  200

seq1  TGATTCCACATTGATGGCATGGGAGGATGACAACAACCAAGAGAGATACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCACATTGATGGCATGGGAGGATGACAACAACCAAGAGAGATACA  250

seq1  GATGCTCAGATGAAGTGAAGCCCTTTTTGGTCCTCAGAGACCTTTGCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCTCAGATGAAGTGAAGCCCTTTTTGGTCCTCAGAGACCTTTGCATT  300

seq1  CAGGCCACCCTTTCAAAGTGTCACTTCGCACCTCACTCTGCCATGTCTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCACCCTTTCAAAGTGTCACTTCGCACCTCACTCTGCCATGTCTAG  350

seq1  AAAGAGTCTCTCATACACACCCTAGATAATTCCTCTTGTTAATTCTAAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTCTCTCATACACACCCTAGATAATTCCTCTTGTTAATTCTAAGC  400

seq1  CCACCACATTGATGGTCAAGCTGACAGCAACCATCATACCAGACATC  447
      |||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCACCACATTGATGGTCAAGCTGACAGCAACCATCATACCTGACATC  447

seq1: chr8_92392979_92393046
seq2: B6Ng01-034M15.g_668_711 (reverse)

seq1  AAAACAACACAAAACAAAAAAACACACACATACAAAATTCCATGGTAGTT  50
      |||| |||| |||||||||||||| ||||  ||||||             
seq2  AAAAAAACA-AAAACAAAAAAACA-ACACCAACAAAA-------------  35

seq1  TCTATGGTTAAACTTGGA  68
               |||||||||
seq2  ---------AAACTTGGA  44