BAC Information

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BAC

Clone NameB6Ng01-036K04
Chromosome8 (Build37)
Map Location 4,501,064 - 4,624,928
singlet/doubletdoublet
Overlap geneLass4, Vmn2r-ps89, EG633533, BC003267
Upstream geneMcoln1, Pnpla6, C330021F23Rik, 2310057J16Rik, Xab2, Pcp2, Stxbp2, Retn, 1810033B17Rik, LOC664858, Trappc5, Fcer2a, Clec4g, Cd209a, LOC664870, Cd209e, Cd209d, Cd209b, Cd209c, LOC664888, EG384770, EG664905, LOC664915, LOC664922, LOC631071, Cd209f, Cd209g, B130050I23Rik, BC068157, Lrrc8e, Map2k7, LOC100039590, Snapc2, Ctxn1, Timm44, Elavl1, Ccl25, LOC664977, Ppia-ps8_36.1
Downstream geneLOC665021, EG623133, EG665044, EG623223, LOC100040234, Shcbp1, EG622568, LOC669393, EG631359, LOC100039687, LOC436026, Slc10a2, LOC434275, LOC623409
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036K04.bB6Ng01-036K04.g
ACCDH864746DH864747
length576611
definitionDH864746|Mus musculus domesticus DNA, BAC clone: B6Ng01-036K04, 5' end.DH864747|Mus musculus domesticus DNA, BAC clone: B6Ng01-036K04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(4,624,347 - 4,624,928)(4,501,064 - 4,501,659)
sequence
tgaggtcatgttctgactactatgaggaataggcacgaatcaggcacata
atcatgcatacatgcaagatactaatattcatctttaaaattagaaacaa
acatgacaggtaggaataatgtcacacatctgcaattcaatgactcagaa
ggctcaggtaccattaacatcatgaatatacgctgtcttgaaaaacagaa
tatacgctatcaaacttaaaagttgaagatgtggaggaagatcagcacaa
cagcatatgcttgacttgtacaaaaaccaacattccagcaccatcagcca
atatataaaaacaaaaacaaaaagtcagtcattttggcctctagaactct
acagccaggtgggtctccatgtttgaagtctgccttgtctaattcccact
ttgagaacagggaaggttacacagagaaactttgccttcaaaaccaaaaa
gaacaaaattaaaaatatcaaaacagctgggcggtggtggcgcacttctt
taatcccagcactctggaggtagaggcaggtggatttctgagttcgaggc
cagcctagtctacaaagtgagttcca
gaattcctgagttagcaatagagtttgctcagccccctgtgtagactcta
gtgtgtaggccagtacttgatacgtggtaggtaccaagtaagtgttgttg
atcaaatgatgctaggcatccagataccctggatacagcctacgtaaaga
tcaggcaggatgttaagatgaggctcagtttgggtacaggttcataaaat
aggtaagctcaccttctgcttctcagctttctacttcattatgatcttcg
gtgattctgtatcctagcaagctacaagatgatagaagcaaccagtcttc
aacagaaatctcaactatggcttcttggagacataggtagaggccaaaag
gacttggggggtgaatctcatttagttagccttttttggacctcaaacac
tgaaaccagagcatttagattttcttgtgttttctttttccccagaatcc
tgtctggaggacgaaggggcttcctctactctgcttgggtgctattttgg
gcttaaggctggaattggaacccagcaataaaacactgtggttaggaatc
ccatagaacaggggttctcaacccttcctaaaggctgggaccctttcgta
ccccttcctca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_4624347_4624928
seq2: B6Ng01-036K04.b_45_626 (reverse)

seq1  TGGAACTCACTTTGTAGACTAGGCTGGCCTCGAACTCAGAAATCCACCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTCACTTTGTAGACTAGGCTGGCCTCGAACTCAGAAATCCACCTG  50

seq1  CCTCTACCTCCAGAGTGCTGGGATTAAAGAAGTGCGCCACCACCGCCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTACCTCCAGAGTGCTGGGATTAAAGAAGTGCGCCACCACCGCCCAG  100

seq1  CTGTTTTGATATTTTTAATTTTGTTCTTTTTGGTTTTGAAGGCAAAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTGATATTTTTAATTTTGTTCTTTTTGGTTTTGAAGGCAAAGTTT  150

seq1  CTCTGTGTAACCTTCCCTGTTCTCAAAGTGGGAATTAGACAAGGCAGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTGTAACCTTCCCTGTTCTCAAAGTGGGAATTAGACAAGGCAGACT  200

seq1  TCAAACATGGAGACCCACCTGGCTGTAGAGTTCTAGAGGCCAAAATGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACATGGAGACCCACCTGGCTGTAGAGTTCTAGAGGCCAAAATGACT  250

seq1  GACTTTTTGTTTTTGTTTTTATATATTGGCTGATGGTGCTGGAATGTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTTGTTTTTGTTTTTATATATTGGCTGATGGTGCTGGAATGTTGG  300

seq1  TTTTTGTACAAGTCAAGCATATGCTGTTGTGCTGATCTTCCTCCACATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGTACAAGTCAAGCATATGCTGTTGTGCTGATCTTCCTCCACATCT  350

seq1  TCAACTTTTAAGTTTGATAGCGTATATTCTGTTTTTCAAGACAGCGTATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACTTTTAAGTTTGATAGCGTATATTCTGTTTTTCAAGACAGCGTATA  400

seq1  TTCATGATGTTAATGGTACCTGAGCCTTCTGAGTCATTGAATTGCAGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGATGTTAATGGTACCTGAGCCTTCTGAGTCATTGAATTGCAGATG  450

seq1  TGTGACATTATTCCTACCTGTCATGTTTGTTTCTAATTTTAAAGATGAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACATTATTCCTACCTGTCATGTTTGTTTCTAATTTTAAAGATGAAT  500

seq1  ATTAGTATCTTGCATGTATGCATGATTATGTGCCTGATTCGTGCCTATTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGTATCTTGCATGTATGCATGATTATGTGCCTGATTCGTGCCTATTC  550

seq1  CTCATAGTAGTCAGAACATGACCTCAGAATTC  582
      ||||||||||||||||||||||||||||||||
seq2  CTCATAGTAGTCAGAACATGACCTCAGAATTC  582

seq1: chr8_4501064_4501659
seq2: B6Ng01-036K04.g_70_680

seq1  GAATTCCTGAGTTAGCAATAGAGTTTGCTCAGCCCCCTGTGTAGACTCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAGTTAGCAATAGAGTTTGCTCAGCCCCCTGTGTAGACTCTA  50

seq1  GTGTGTAGGCCAGTACTTGATACGTGGTAGGTACCAAGTAAGTGTTGTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTAGGCCAGTACTTGATACGTGGTAGGTACCAAGTAAGTGTTGTTG  100

seq1  ATCAAATGATGCTAGGCATCCAGATACCCTGGATACAGCCTACGTAAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATGATGCTAGGCATCCAGATACCCTGGATACAGCCTACGTAAAGA  150

seq1  TCAGGCAGGATGTTAAGATGAGGCTCAGTTTGGGTACAGGTTCATAAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCAGGATGTTAAGATGAGGCTCAGTTTGGGTACAGGTTCATAAAAT  200

seq1  AGGTAAGCTCACCTTCTGCTTCTCAGCTTTCTACTTCATTATGATCTTCG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAGCTCACCTTCTGCTTCTCAGCTTTCTACTTCATTATGATCTTCG  250

seq1  GTGATTCTGTATCCTAGCAAGCTACAAGATGATAGAAGCAACCAGTCTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTCTGTATCCTAGCAAGCTACAAGATGATAGAAGCAACCAGTCTTC  300

seq1  AACAGAAATCTCAACTATGGCTTCTTGGAGACATAGGTAGAGGCCAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAAATCTCAACTATGGCTTCTTGGAGACATAGGTAGAGGCCAAAAG  350

seq1  GACTT-GGGGGTGAATCTCATTTAGTTAGCCTTTCTTGGACCTCAAACAC  399
      ||||| |||||||||||||||||||||||||||| |||||||||||||||
seq2  GACTTGGGGGGTGAATCTCATTTAGTTAGCCTTTTTTGGACCTCAAACAC  400

seq1  TG-AAGCAGAGCATTTAGATTTTCTTGTGTTTTCTTTTT-CCCAGAAT-C  446
      || || ||||||||||||||||||||||||||||||||| |||||||| |
seq2  TGAAACCAGAGCATTTAGATTTTCTTGTGTTTTCTTTTTCCCCAGAATCC  450

seq1  TGTCT-GAGGACGAAGGGGCTTCCTCTACTCTGCTT-GGTGCTA-TTTGG  493
      ||||| |||||||||||||||||||||||||||||| ||||||| |||||
seq2  TGTCTGGAGGACGAAGGGGCTTCCTCTACTCTGCTTGGGTGCTATTTTGG  500

seq1  GC-TGAGGCTGGATTTGG-AGCCAGCAAT-AGACACTGT-GTTAGGAAT-  538
      || | |||||||| |||| | |||||||| | ||||||| ||||||||| 
seq2  GCTTAAGGCTGGAATTGGAACCCAGCAATAAAACACTGTGGTTAGGAATC  550

seq1  CCATAGAACAGCGGTTCTCAA-CCTTCCT-AATGCTGTGACCCTTCAGTA  586
      ||||||||||| ||||||||| ||||||| || |||| |||||||  |||
seq2  CCATAGAACAGGGGTTCTCAACCCTTCCTAAAGGCTGGGACCCTTTCGTA  600

seq1  -CACTTCCTCA  596
       | ||||||||
seq2  CCCCTTCCTCA  611