BAC Information

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BAC

Clone NameB6Ng01-038N19
Chromosome8 (Build37)
Map Location 85,378,406 - 85,378,927
singlet/doubletsinglet
Overlap genenone
Upstream geneInpp4b, LOC671182, Il15, EG666564, LOC675800, EG666289, Zfp330
Downstream geneRnf150, LOC100039688, Tbc1d9, Ucp1, Elmod2, 4933434I20Rik, Clgn, Scoc, LOC546077, LOC675854, Olfr370, Ndufb7, Gpsn2, Dnajb1, Gipc1, Ptger1, Pkn1, Ddx39, Cd97
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038N19.bB6Ng01-038N19.g
ACCDH866301DH866302
length1,0061,232
definitionDH866301|Mus musculus domesticus DNA, BAC clone: B6Ng01-038N19, 5' end.DH866302|Mus musculus domesticus DNA, BAC clone: B6Ng01-038N19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcagctgtactgggacccgaggtgatgataacttctcatgatgtaa
ccctggctaacctggaccaggctgagcttgatctcacagagatctacctg
ctcctacctctcaactgatgagtgatggggtgaaatgtatgatgcctcaa
agtgacaatcctaaaaacaactcaggatttttaataaatggttatgtaca
tgcatttatggcttatcacttggttttacgttagataacccagtagggtc
tcatccctgtagaaagctgattctctctcacacagcagccattgattgcc
cataccttttcacctagggcttgaagtcttataaaatttctcacatgtat
gttggaatatcaactgatgctttcattgtaaaggtattgtttaggtaacc
aaacttattgagacttcatggatacagcattcctcatgtctaaaagactc
tatctcagagcaagtgtcctggtcctctgagcttataaccactctatccc
ctcttctgcaatggtctttgagtctttgatgtaggagtgttatggatgta
caataaggactggacatctatggtcacttattccctgcattttggtgagc
tgtgtgtctcagtaatagccccatctactgcaaaaagaagcttcattgat
taggagtgaaaaccatatttatctaagggaataaggataagtatttagga
tataattagaagctatattgattaatgacattggtagtaggttttcctct
aggttctgcgacctccacagtatagatatttggctaggttcatagttcca
tgcctgaattccttcctactgagtgggccacaaatccaattacatagctg
ttgttttattctcaagatataaataccactactgtcctatttgagggcat
cttgctaggctggccatttgctttgtgtttcattgggtttacagctgtgt
tggctattgattgtttttcttctttgacatcttctgtagaaccttcagat
actatg
gaattcaatgaaaatggaggtacaagatacccaaactcatgagacacaat
aaaagcagtgctaagaggaaaattcatagcactaagtgccttctcaaaga
aattggatagatctcatactggcaacttaacagcacacctgaaagctcta
gaataaaaagcacacccaagaggaatagatggcaagaaatagtcaaactc
agagctgaaatcaatcaattagaaacaaaaagaacaatacaaagaatcaa
caaaaccaagagctggttctttgagaaaatcaacaagatatacaaaccca
aactaattaatacagagaccatatcaaattaacaaaatcagaaatgaaaa
ggtagacataacaacagaaactgaggagatgtgaaaagtcattgggtctt
actgcaaaaatcttacataaaaatctaagtgaaatgaatgattttctaga
cagataacacttaccaaagttaaatcaagatcaagttaaactatctaaaa
agtcccataagcccttaggaaatagaagtagttatcaaaagcctcccaat
gagggccagatggttttagggcagaattctaccagactttcaagaaagag
ctaataccaataatcctcaaacttctagaaaatagaaacaaaagaaacac
tacctaattcattttatgaggccacagttactctgatacttaaatcacac
aaagactcaacaaagaaagagaacttcagaccagttttatttatgaacat
cagtgtaaaaatacttaataaaattctcaaaaaccaaatccaagaacaca
tcaaaaccatcatccaccacaatcaagtaggctccattccaggaatgcag
ggatggttcaatatagaaaaatctgtcaatgcaacccactatataaacaa
actgaaagaaagaagaaaacacatgatcatctcattagatgctgaaaaag
acttcacaaattcacacccctttatgttaaagtcttggagagtctgggat
caaggtacatacctaacatataaagcataacacagcacagcacatcaact
aatagagtgaaactgagcattccactaatcaggacaaacagactgtccac
tcctcattacttcctcaaatagtacttagttctgaagtgaaagacacaga
gatcagggtttcgatgaaggagagttcagttctagtccgagtatgatgta
tactatacacctcccattctactgaagagatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_85378406_85378927
seq2: B6Ng01-038N19.b_46_567 (reverse)

seq1  CTCAAAGACCATTGCAGAAGAGGGGATAGAGTGGTTATAAGCTCAGAGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAAGACCATTGCAGAAGAGGGGATAGAGTGGTTATAAGCTCAGAGGA  50

seq1  CCAGGACACTTGCTCTGAGATAGAGTCTTTTAGACATGAGGAATGCTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGACACTTGCTCTGAGATAGAGTCTTTTAGACATGAGGAATGCTGTA  100

seq1  TCCATGAAGTCTCAATAAGTTTGGTTACCTAAACAATACCTTTACAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATGAAGTCTCAATAAGTTTGGTTACCTAAACAATACCTTTACAATGA  150

seq1  AAGCATCAGTTGATATTCCAACATACATGTGAGAAATTTTATAAGACTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATCAGTTGATATTCCAACATACATGTGAGAAATTTTATAAGACTTC  200

seq1  AAGCCCTAGGTGAAAAGGTATGGGCAATCAATGGCTGCTGTGTGAGAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCTAGGTGAAAAGGTATGGGCAATCAATGGCTGCTGTGTGAGAGAG  250

seq1  AATCAGCTTTCTACAGGGATGAGACCCTACTGGGTTATCTAACGTAAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGCTTTCTACAGGGATGAGACCCTACTGGGTTATCTAACGTAAAAC  300

seq1  CAAGTGATAAGCCATAAATGCATGTACATAACCATTTATTAAAAATCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGATAAGCCATAAATGCATGTACATAACCATTTATTAAAAATCCTG  350

seq1  AGTTGTTTTTAGGATTGTCACTTTGAGGCATCATACATTTCACCCCATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTTTTTAGGATTGTCACTTTGAGGCATCATACATTTCACCCCATCA  400

seq1  CTCATCAGTTGAGAGGTAGGAGCAGGTAGATCTCTGTGAGATCAAGCTCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCAGTTGAGAGGTAGGAGCAGGTAGATCTCTGTGAGATCAAGCTCA  450

seq1  GCCTGGTCCAGGTTAGCCAGGGTTACATCATGAGAAGTTATCATCACCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTCCAGGTTAGCCAGGGTTACATCATGAGAAGTTATCATCACCTC  500

seq1  GGGTCCCAGTACAGCTGAATTC  522
      ||||||||||||||||||||||
seq2  GGGTCCCAGTACAGCTGAATTC  522