BAC Information

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BAC

Clone NameB6Ng01-038P10
Chromosome8 (Build37)
Map Location 62,570,603 - 62,571,777
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC665116, LOC436042
Downstream geneAadat, Mfap3l, LOC100040679, 2700029M09Rik, Clcn3, B230317F23Rik, Nek1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038P10.bB6Ng01-038P10.g
ACCDH866372DH866373
length1,1631,220
definitionDH866372|Mus musculus domesticus DNA, BAC clone: B6Ng01-038P10, 5' end.DH866373|Mus musculus domesticus DNA, BAC clone: B6Ng01-038P10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgcagcagtgagagtttctttatttattaaaaacggatattga
attcagataatttgcaggcattgaatggagcttggggaatagagtggtga
atgagaaagacatcatccttcagtaacagagctggaccacttaggaattg
cttcacaggaaaaactcttcctatggggttagcactaatattctagaata
gttcttaagaatttttgagagactcggacatcttgtgaatcattttacca
taataatgtctcaattacagaacacgttattgaatttctttctcttgata
tctttactttaatggttgtgctcagcatgtctaaagaagaagcatattcc
cttgcagttttggataggagcttaagccaagatgagtgcaaaactattct
gggaattagcatgggctgtttgaattatggctatatttggtttaaaagat
gaattacacatcaggaaaaatgaataaattataactacaacttttgcata
ttaaatataccaaattgtactatatcaaataacagaaatttaaataaaat
ttttcttttattagatgcaggggttttcctttgtataacatcagtaacaa
taatgataaatgacatttattgaactttaactgtatgccaagggcttttc
ttacaacaaaaattagatgacatatagtcacatgttcatttaaaacttag
aaatgaaaagtaagattttgagaaaaattgtgatgttttttttttccatt
ttttattaggtatttcgctcatttacatttgcaatgctataccaaaagtc
ccccgtagccacccaccccctctcccctacccacccactccccttttatg
gccctggcgttcccctgtactggggcatataaagtttgcgtgtcccatgg
gcctctctttccagtgatggccgactaggccatctttttgatgcatatgc
agctagagtcagagctccggggtactggttagttcataatgttgttcacc
tatagggttgcagatcccttagcttctttggtacttttctcaagctcctt
cattgggggcatgtgatcatcaatagccgactgtgagcatccacttctaa
tttgctagccaggcatactctgacaagagacagctatacaggtctttcag
ctaatctgctagt
gaattcaataaaaccgtccaagatctaaaaatggaggtagaaacaataaa
gaatatccaaagagaaattactctgaaggtagaaatcctaggaaagaaat
catagatgcgagcatcagcaacagaatacaagagatggaagagagaatct
caggtgcagaagattccatagaaaacatggacacaacaatcaaagatgca
aaaatgcaaaaagacgctgactcaaaacatcaaggaaatccaggacagaa
tgagaagaccaaacctaaggataataggtatatatgagaatgaagatttt
ttaacttaaagggccagtaatatcttcgacaaaattataaagaaaacttc
cctaacctaaagaaagaaatgcccatgaacatacaagaagcctatggaac
tccaaatagactagacctgaaaaaaaaaaacaataaatacactaaataaa
caatattaaaagcagtaaaggaaaagggtagagtaaaatataaaggcaga
cctattagtattacaccacacttttcaccagagactatgaaagccagaag
atcctggacagatgtcatacagaccctaagagaacacgaatgccagtcca
gactactatatccagcaaaactttaaattaccataattggagaaaacaaa
gtactccaagacaaaatcaaattcacacaacatctttccatgaatccaga
tcttcaaaggataatgaaggaaaaactccaacacaaggaggttaaatgac
agcctacaaaaagcaagaaagtaattcttcaacaaacctaaaagaagaac
agaattccagctctaccaacagaaataacaggaagcaataattacttttc
cttaatatctcttagtatcaatggactcatttccctcaataaaaagacat
aggctaacagactggctacataaacagacccacattttgctgcatatatg
aaaccacctcagacaagacagacactacctcaaagtaaacactgaaacat
tttcagcaatgttcaagaaacagctgagtagcattctaatatcaataaat
cacttcactaagttatcaaaagtgagggcctcatcctcaaaggtaaatct
cactgactctcagttctgaattcatgttcaatgcaagcatccatagacct
gtttagcagtcattgaccttcaaatttgaatttatgctactgcactgccg
tattgtgtcactggaacaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_62570603_62571777
seq2: B6Ng01-038P10.b_45_1207 (reverse)

seq1  ACTAGCAAGATTATGCTGAAAGGACCCTGATATAGCTGTCTCTTGTCAGA  50
      |||||| |||||| ||||||||   |||| ||||||||||||||||||||
seq2  ACTAGC-AGATTA-GCTGAAAG--ACCTG-TATAGCTGTCTCTTGTCAGA  45

seq1  GTATGCCTGGGCCTAGCAAATATAGAAGTGGATGCTCACAGTCGGCTATT  100
      ||||||||||  ||||||||| ||||||||||||||||||||||||||||
seq2  GTATGCCTGG--CTAGCAAAT-TAGAAGTGGATGCTCACAGTCGGCTATT  92

seq1  GGATGGATCACATGGCCCCCAATGAAGGAGCTTGAG-AAAGTACCAAAGA  149
       ||| |||||||| |||||||||||||||||||||| |||||||||||||
seq2  -GAT-GATCACAT-GCCCCCAATGAAGGAGCTTGAGAAAAGTACCAAAGA  139

seq1  AGCTAAAGGGATCTGCAACCCTATAGGTGGAACAACATTATGAACTAACC  199
      |||| ||||||||||||||||||||||| |||||||||||||||||||||
seq2  AGCT-AAGGGATCTGCAACCCTATAGGT-GAACAACATTATGAACTAACC  187

seq1  AGTACCCCGGAGCTCTTGACTCTAGCTGCATATGCATC-AAAAGATGGCC  248
      ||||||||||||||| |||||||||||||||||||||| |||||||||||
seq2  AGTACCCCGGAGCTC-TGACTCTAGCTGCATATGCATCAAAAAGATGGCC  236

seq1  TAGTCGGCCATCACTGGAAAGAGAGGCCCATTGGACACGCAAACTTTATA  298
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TAGTCGGCCATCACTGGAAAGAGAGGCCCATGGGACACGCAAACTTTATA  286

seq1  TGCCCCAGTACAGGGGAACGCCAGGGCCATAAAAGGGGAGTGGGTGGGTA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCCAGTACAGGGGAACGCCAGGGCCATAAAAGGGGAGTGGGTGGGTA  336

seq1  GGGGAGAGGGGGTGGGTGGCTACGGGGGACTTTTGGTATAGCATTGCAAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGAGGGGGTGGGTGGCTACGGGGGACTTTTGGTATAGCATTGCAAA  386

seq1  TGTAAATGAGCGAAATACCTAATAAAAAATGGAAAAAAAAAACATCACAA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAATGAGCGAAATACCTAATAAAAAATGGAAAAAAAAAACATCACAA  436

seq1  TTTTTCTCAAAATCTTACTTTTCATTTCTAAGTTTTAAATGAACATGTGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTCAAAATCTTACTTTTCATTTCTAAGTTTTAAATGAACATGTGA  486

seq1  CTATATGTCATCTAATTTTTGTTGTAAGAAAAGCCCTTGGCATACAGTTA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATATGTCATCTAATTTTTGTTGTAAGAAAAGCCCTTGGCATACAGTTA  536

seq1  AAGTTCAATAAATGTCATTTATCATTATTGTTACTGATGTTATACAAAGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCAATAAATGTCATTTATCATTATTGTTACTGATGTTATACAAAGG  586

seq1  AAAACCCCTGCATCTAATAAAAGAAAAATTTTATTTAAATTTCTGTTATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCCCTGCATCTAATAAAAGAAAAATTTTATTTAAATTTCTGTTATT  636

seq1  TGATATAGTACAATTTGGTATATTTAATATGCAAAAGTTGTAGTTATAAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATAGTACAATTTGGTATATTTAATATGCAAAAGTTGTAGTTATAAT  686

seq1  TTATTCATTTTTCCTGATGTGTAATTCATCTTTTAAACCAAATATAGCCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCATTTTTCCTGATGTGTAATTCATCTTTTAAACCAAATATAGCCA  736

seq1  TAATTCAAACAGCCCATGCTAATTCCCAGAATAGTTTTGCACTCATCTTG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTCAAACAGCCCATGCTAATTCCCAGAATAGTTTTGCACTCATCTTG  786

seq1  GCTTAAGCTCCTATCCAAAACTGCAAGGGAATATGCTTCTTCTTTAGACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAAGCTCCTATCCAAAACTGCAAGGGAATATGCTTCTTCTTTAGACA  836

seq1  TGCTGAGCACAACCATTAAAGTAAAGATATCAAGAGAAAGAAATTCAATA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGCACAACCATTAAAGTAAAGATATCAAGAGAAAGAAATTCAATA  886

seq1  ACGTGTTCTGTAATTGAGACATTATTATGGTAAAATGATTCACAAGATGT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTGTTCTGTAATTGAGACATTATTATGGTAAAATGATTCACAAGATGT  936

seq1  CCGAGTCTCTCAAAAATTCTTAAGAACTATTCTAGAATATTAGTGCTAAC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAGTCTCTCAAAAATTCTTAAGAACTATTCTAGAATATTAGTGCTAAC  986

seq1  CCCATAGGAAGAGTTTTTCCTGTGAAGCAATTCCTAAGTGGTCCAGCTCT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATAGGAAGAGTTTTTCCTGTGAAGCAATTCCTAAGTGGTCCAGCTCT  1036

seq1  GTTACTGAAGGATGATGTCTTTCTCATTCACCACTCTATTCCCCAAGCTC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACTGAAGGATGATGTCTTTCTCATTCACCACTCTATTCCCCAAGCTC  1086

seq1  CATTCAATGCCTGCAAATTATCTGAATTCAATATCCGTTTTTAATAAATA  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCAATGCCTGCAAATTATCTGAATTCAATATCCGTTTTTAATAAATA  1136

seq1  AAGAAACTCTCACTGCTGCAAGAATTC  1175
      |||||||||||||||||||||||||||
seq2  AAGAAACTCTCACTGCTGCAAGAATTC  1163