BAC Information

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BAC

Clone NameB6Ng01-041L17
Chromosome8 (Build37)
Map Location 92,513,318 - 92,661,555
singlet/doubletdoublet
Overlap genenone
Upstream geneSall1, LOC100041089, EG625801, EG384862
Downstream geneTox3, LOC100041133, Chd9, LOC100041156, EG626231, Rbl2, Aktip
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041L17.bB6Ng01-041L17.g
ACCDH868308DH868309
length964951
definitionDH868308|Mus musculus domesticus DNA, BAC clone: B6Ng01-041L17, 5' end.DH868309|Mus musculus domesticus DNA, BAC clone: B6Ng01-041L17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(92,513,318 - 92,514,272)(92,660,604 - 92,661,555)
sequence
gaattctaggagaagtcaggtttaccacccagtgatctggactcaagatt
tcgcaacattgctgagttccccaacatggacatgtctggaaccattccat
cttttttccggagctggtttgtgctaaatgttctattgcaactagaaatc
ctgacctgtgcagtatcccctaccctaagcagattatttagttactggca
accttatgatggtgagaatacggacctctacccttagactagatcccgaa
gcttggattaggccatgccattctgaagctctctctgagacagagttaag
aatcagtctgtgctgtgattgggtagctggccgctccaagctccttttca
tgtatgctgtgctgaacaatatcttgcaatgtgaaccttctcaacaccac
taaaactttttttttttttttggttttacaagacagggtttctctgtaaa
gccttggctgtcctggaactcactctgtagaccaggctagcctctaactc
agaaatccgcctgcctctgcctcccaagtgctgggattaaaggtgtgcac
caccacgcccagcaaaacattactttttaaaaaacagacatttcatttgt
cctgaagcttgttccaagattgctcagagagactgatggagaatttgacc
caaagattaaggatggtctctgaagaggctcctctggcctcttccttctt
tcccctaccattcctctcatagtggctatctctttcaccaccaccccctc
tcatatttttttagtcttaacaaagctcctctgtaactttaaaggcaagc
ctctctttcacatttagatttccatattctgtattgtttctgtctaacat
tctcgctcccaccccaaggctcaaatgtggacttgagcctctcttctgag
cctcattgaaggagttgtgtctgcttctttacagatggatggctgtggct
ttgctctctctctc
gaattccctccatcagatggacatgtagaaagtctttgggggcattagtt
gattgtaatcaatacaggaagaaccagctcacggtgggtggtgtcatcca
tagacagataggcttggatgatataagaaagcattacttacttctgaaag
cagtaagcagtttatagtattcctctgaggtctctacctcaagcttctgc
cccagcttcccttgatggtaaatgaaatcctttatttaagttgcttttgg
tcatgtttgtcacagcaactgaaggcaaactgggataggttctgggtgga
aaaactatgatcagctgggtggctcacaatatgaaggcagcattcaaggg
aacttcagtaaataaacaaatatgtgattttttcatatgttaattggctg
taggaagttattttaagtttttcagataactgaaaaaaaatccgcaaatt
ttagaaatcttaaatagatcgatacctgagatgcttaggtctccatttaa
cctaagtatagcctgttcacatgcatggaggtgtaagctatgtttctcag
atttcactctgggtcataacattgtttttaaatcaatcgtggaatcttaa
ttagggtttccctaagccctgcacctttggacattacctgggatatttat
ttcactttgcttagtgagagtgagaactaagtgtaactttgagatcaagc
agaggttttatttttggagactttcacagtttcctcccaggctcctaggt
aaatgcccatttttaaagtcatgtactacagatatattctcaaatgttta
tttaaaatttcggcatctgtcctcttgtttatccttatattccacaggca
gccacacctatgagtttggttatggacagtccctcaaattctttatgcta
ctgcctatgtgttagagttaaaagctggatgattcagctgtgttcaacct
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_92513318_92514272
seq2: B6Ng01-041L17.b_46_997

seq1  GAATTCTAGGAGAAGTCAGGTTTACCACCCAGTGATCTGGACTCAAGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGGAGAAGTCAGGTTTACCACCCAGTGATCTGGACTCAAGATT  50

seq1  TCGCAACATTGCTGAGTTCCCCAACATGGACATGTCTGGAACCATTCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCAACATTGCTGAGTTCCCCAACATGGACATGTCTGGAACCATTCCAT  100

seq1  CTTTTTTCCGGAGCTGGTTTGTGCTAAATGTTCTATTGCAACTAGAAATC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTCCGGAGCTGGTTTGTGCTAAATGTTCTATTGCAACTAGAAATC  150

seq1  CTGACCTGTGCAGTATCCCCTACCCTAAGCAGATTATTTAGTTACTGGCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCTGTGCAGTATCCCCTACCCTAAGCAGATTATTTAGTTACTGGCA  200

seq1  ACCTTATGATGGTGAGAATACGGACCTCTACCCTTAGACTAGATCCCGAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTATGATGGTGAGAATACGGACCTCTACCCTTAGACTAGATCCCGAA  250

seq1  GCTTGGATTAGGCCATGCCATTCTGAAGCTCTCTCTGAGACAGAGTTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGATTAGGCCATGCCATTCTGAAGCTCTCTCTGAGACAGAGTTAAG  300

seq1  AATCAGTCTGTGCTGTGATTGGGTAGCTGGCCGCTCCAAGCTCCTTTTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTCTGTGCTGTGATTGGGTAGCTGGCCGCTCCAAGCTCCTTTTCA  350

seq1  TGTATGCTGTGCTGAACAATATCTTGCAATGTGAACCTTCTCAACACCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGCTGTGCTGAACAATATCTTGCAATGTGAACCTTCTCAACACCAC  400

seq1  TAAAACTTTTTTTTTTTTTTTGGTTTTACAAGACAGGGTTTCTCTGTAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAACTTTTTTTTTTTTTTTGGTTTTACAAGACAGGGTTTCTCTGTAAA  450

seq1  GCCTTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTAGCCTCTAACTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTGGCTGTCCTGGAACTCACTCTGTAGACCAGGCTAGCCTCTAACTC  500

seq1  AGAAATCCGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCCGCCTGCCTCTGCCTCCCAAGTGCTGGGATTAAAGGTGTGCAC  550

seq1  CACCACGCCCAGCAAAACATTACTTTTTAAAAAACAGACATTTCATTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCACGCCCAGCAAAACATTACTTTTTAAAAAACAGACATTTCATTTGT  600

seq1  CCTGAAGCTTGTTCCAAGATTGCTCAGAGAGACTGATGGAGAATTTGACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAGCTTGTTCCAAGATTGCTCAGAGAGACTGATGGAGAATTTGACC  650

seq1  CAAAGATTAAGGATGGTCTCTGAAGAGGCTCCTCTGGCCTCTTCCTTCTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGATTAAGGATGGTCTCTGAAGAGGCTCCTCTGGCCTCTTCCTTCTT  700

seq1  TCCCCTACCATTCCTCTCATAGTGGCTATCTCTTTCACCACCACCCCCTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTACCATTCCTCTCATAGTGGCTATCTCTTTCACCACCACCCCCTC  750

seq1  TCATATTTTTTTAGTCTTAACAAAGCTCCTCTGTAACTTTAAAGGCAAGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATTTTTTTAGTCTTAACAAAGCTCCTCTGTAACTTTAAAGGCAAGC  800

seq1  CTCTCTTTCACATTTAGATTTCCATATTCTGTATTGTTTCTGTCTAACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTTTCACATTTAGATTTCCATATTCTGTATTGTTTCTGTCTAACAT  850

seq1  TCTCGCTCCCACCCCAAGGCTCAAATGTGGACTTGAGGCCTCTCATTCTG  900
      |||||||||||||||||||||||||||||||||||| ||||||| |||||
seq2  TCTCGCTCCCACCCCAAGGCTCAAATGTGGACTTGA-GCCTCTC-TTCTG  898

seq1  AGCCTCATTGAAGGGAGTTGTGTCTGCTTCTTTACAGATGGATTGCTGTG  950
      |||||||||||| |||||||||||||||||||||||||||||| ||||||
seq2  AGCCTCATTGAA-GGAGTTGTGTCTGCTTCTTTACAGATGGATGGCTGTG  947

seq1  GCTTT  955
      |||||
seq2  GCTTT  952

seq1: chr8_92660604_92661555
seq2: B6Ng01-041L17.g_69_1019 (reverse)

seq1  GAGGTTGAACACAGCTGAATACATTCACAGCTTTTAACTCTAACACATAG  50
      |||||||||||||||||||| |||   |||||||||||||||||||||||
seq2  GAGGTTGAACACAGCTGAAT-CAT--CCAGCTTTTAACTCTAACACATAG  47

seq1  GCAGTAGCATAAAGGATTTGAGGGACTGTCCATAACC-AACTCATAGGTG  99
      |||||||||||||| |||||||||||||||||||||| ||||||||||||
seq2  GCAGTAGCATAAAGAATTTGAGGGACTGTCCATAACCAAACTCATAGGTG  97

seq1  TGGCTGCCTGTGGAATATAAGGATAAACAAGAGGACAGATGCCGAAATTT  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGCCTGTGGAATATAAGGATAAACAAGAGGACAGATGCCGAAATTT  147

seq1  TAAATAAACATTTGAGAATATATCTGTAGTACATGACTTTAAAAATGGGC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAACATTTGAGAATATATCTGTAGTACATGACTTTAAAAATGGGC  197

seq1  ATTTACCTAGGAGCCTGGGAGGAAACTGTGAAAGTCTCCAAAAATAAAAC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACCTAGGAGCCTGGGAGGAAACTGTGAAAGTCTCCAAAAATAAAAC  247

seq1  CTCTGCTTGATCTC-AAGTTACACTTAGTTCTCACTCTCACTAAGCAAAG  298
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTCTGCTTGATCTCAAAGTTACACTTAGTTCTCACTCTCACTAAGCAAAG  297

seq1  TGAAATAAATATCCCAGGTAATGTCCAAAGGTGCAGGGCTTAGGGAAACC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATAAATATCCCAGGTAATGTCCAAAGGTGCAGGGCTTAGGGAAACC  347

seq1  CTAATTAAGATTCCACGATTGATTTAAAAACAATGTTATGACCCAGAGTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTAAGATTCCACGATTGATTTAAAAACAATGTTATGACCCAGAGTG  397

seq1  AAATCTGAGAAACATAGCTTACACCTCCATGCATGTGAACAGGCTATACT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGAGAAACATAGCTTACACCTCCATGCATGTGAACAGGCTATACT  447

seq1  TAGGTTAAATGGAGACCTAAGCATCTCAGGTATCGATCTATTTAAGATTT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTAAATGGAGACCTAAGCATCTCAGGTATCGATCTATTTAAGATTT  497

seq1  CTAAAATTTGCGGATTTTTTTTCAGTTATCTGAAAAACTTAAAATAACTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATTTGCGGATTTTTTTTCAGTTATCTGAAAAACTTAAAATAACTT  547

seq1  CCTACAGCCAATTAACATATGAAAAAATCACATATTTGTTTATTTACTGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACAGCCAATTAACATATGAAAAAATCACATATTTGTTTATTTACTGA  597

seq1  AGTTCCCTTGAATGCTGCCTTCATATTGTGAGCCACCCAGCTGATCATAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCCTTGAATGCTGCCTTCATATTGTGAGCCACCCAGCTGATCATAG  647

seq1  TTTTTCCACCCAGAACCTATCCCAGTTTGCCTTCAGTTGCTGTGACAAAC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCACCCAGAACCTATCCCAGTTTGCCTTCAGTTGCTGTGACAAAC  697

seq1  ATGACCAAAAGCAACTTAAATAAAGGATTTCATTTACCATCAAGGGAAGC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACCAAAAGCAACTTAAATAAAGGATTTCATTTACCATCAAGGGAAGC  747

seq1  TGGGGCAGAAGCTTGAGGTAGAGACCTCAGAGGAATACTATAAACTGCTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGCAGAAGCTTGAGGTAGAGACCTCAGAGGAATACTATAAACTGCTT  797

seq1  ACTGCTTTCAGAAGTAAGTAATGCTTTCTTATATCATCCAAGCCTATCTG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTTTCAGAAGTAAGTAATGCTTTCTTATATCATCCAAGCCTATCTG  847

seq1  TCTATGGATGACACCACCCACCGTGAGCTGGTTCTTCCTGTATTGATTAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGGATGACACCACCCACCGTGAGCTGGTTCTTCCTGTATTGATTAC  897

seq1  AATCAACTAATGCCCCCAAAGACTTTCTACATGTCCATCTGATGGAGGGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAACTAATGCCCCCAAAGACTTTCTACATGTCCATCTGATGGAGGGA  947

seq1  ATTC  952
      ||||
seq2  ATTC  951