BAC Information

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BAC

Clone NameB6Ng01-043G22
Chromosome8 (Build37)
Map Location 117,635,281 - 117,746,461
singlet/doubletdoublet
Overlap geneWwox
Upstream geneNudt7, AI427515, Clec3a
Downstream geneMaf
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043G22.bB6Ng01-043G22.g
ACCDH869496DH869497
length1,088381
definitionDH869496|Mus musculus domesticus DNA, BAC clone: B6Ng01-043G22, 5' end.DH869497|Mus musculus domesticus DNA, BAC clone: B6Ng01-043G22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(117,745,371 - 117,746,461)(117,635,281 - 117,635,669)
sequence
gaattctgatatttgtcagcacagaaagaggctgagacttgggtccattg
aggaggtgggcaaaggtggccaaaaaaaaacaggttttaagtctctcatc
tgggcccagcagggtgcccaagtattactgggttcggtttaatattgaaa
agcctgggtttagatgttagagagcagacactgaaaaacagatttttttt
ttttttggctgtgaggctgagattattatgctacagctgatggcagccta
cagttttcgcccgccaactggcaactgcatacagttcagcattatatcgc
acctctagaaaccgcacctataaaatgagcgagaataccaataaagccac
tgtttcaggctggggcgctctgtttgtaaagtgcttgctgtgcaagtgtg
agaaaataagtgagtttgatcctcggaactaaaatgataggaaaggcatg
gtggctgcaatccaggtgctgagaaggctggggcagcaggatccctgggg
atttctagccagcccacctagactaattggcaagttcctgaccaatgaga
aaccttgtctcaaaaaagaagtgaagtaaatggctcctgggcaaggatac
ccaaggctgtcctttggttttcacatacacttggataaacacatacgcat
tatgctcacacaaaagcatacacacgcccgcataaatgctatttcctagg
atcataaggaggaaagaatagtatgatattgttatgtttagtgcataagt
ctctgctgaatttaagccactggtatcatctccgaacataaaataatcta
aatctcataacagtcaggcactgtgccgggcaggaagctgaggcaggcta
ggactgcagatagtttgaaagagaagtcacactgcatgtaggtggagaag
ctaaggatttggtctgatctgtttgactctaaagcttgcggctctttccg
tatcacctgactagtcatagtttcagatagcgtcaactggctaaggtcaa
ggaaaggcagcggtaaaggccaggtgtgctggctcgcttgcatctctaat
tccagtgtggagaggtagagatacggaaccttgagtct
tctcctgagtgaagcacaattaaaactctgacgacggcggcatttggctt
ttgaaatatgtgggttcctgaaaggctccagtccacactgaaatttctgt
acctgctacataaatgcccgggacagccttgcccaaaaggtattctttct
tgacgtttctcccaggatgcattacagcctgtagtaggttttcagagaaa
agtccgaagaccttaaaagcctaagacgaagtgagctccacaccagagct
ggggcaaggggagagagggagagagagagagagagagagagagagagaga
gagagagagagagagagagagagttttttttgtttttgttattttcgtgt
gtatctgtttctttggtgaaggtttgtaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_117745371_117746461
seq2: B6Ng01-043G22.b_46_1133 (reverse)

seq1  AGACTCAGGGTTCCCGTATCTCTACCTCTCCAGCACTGGAATTAGAGATG  50
      ||||||| |||| ||||||||||||||||||| |||||||||||||||||
seq2  AGACTCAAGGTT-CCGTATCTCTACCTCTCCA-CACTGGAATTAGAGATG  48

seq1  CAAGCGAGCCAGCACACCTGGCTTTTACCGCTGCCTTTTCCTTGACCTTA  100
      |||||||||||||||||||||| |||||||||||| ||||||||||||||
seq2  CAAGCGAGCCAGCACACCTGGCCTTTACCGCTGCC-TTTCCTTGACCTTA  97

seq1  GCCAGTTGACGCTATCTGAAACTATGACTAGTCAGGTGATACGGAAAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTTGACGCTATCTGAAACTATGACTAGTCAGGTGATACGGAAAGAG  147

seq1  CCGCAAGCTTTAGAGTCAAACAGATCAGACCAAATCCTTAGCTTCTCCAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGCAAGCTTTAGAGTCAAACAGATCAGACCAAATCCTTAGCTTCTCCAC  197

seq1  CTACATGCAGTGTGACTTCTCTTTCAAACTATCTGCAGTCCTAGCCTGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATGCAGTGTGACTTCTCTTTCAAACTATCTGCAGTCCTAGCCTGCC  247

seq1  TCAGCTTCCTGCCCGGCACAGTGCCTGACTGTTATGAGATTTAGATTATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTCCTGCCCGGCACAGTGCCTGACTGTTATGAGATTTAGATTATT  297

seq1  TTATGTTCGGAGATGATACCAGTGGCTTAAATTCAGCAGAGACTTATGCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGTTCGGAGATGATACCAGTGGCTTAAATTCAGCAGAGACTTATGCA  347

seq1  CTAAACATAACAATATCATACTATTCTTTCCTCCTTATGATCCTAGGAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACATAACAATATCATACTATTCTTTCCTCCTTATGATCCTAGGAAA  397

seq1  TAGCATTTATGCGGGCGTGTGTATGCTTTTGTGTGAGCATAATGCGTATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCATTTATGCGGGCGTGTGTATGCTTTTGTGTGAGCATAATGCGTATG  447

seq1  TGTTTATCCAAGTGTATGTGAAAACCAAAGGACAGCCTTGGGTATCCTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTATCCAAGTGTATGTGAAAACCAAAGGACAGCCTTGGGTATCCTTG  497

seq1  CCCAGGAGCCATTTACTTCACTTCTTTTTTGAGACAAGGTTTCTCATTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGAGCCATTTACTTCACTTCTTTTTTGAGACAAGGTTTCTCATTGG  547

seq1  TCAGGAACTTGCCAATTAGTCTAGGTGGGCTGGCTAGAAATCCCCAGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAACTTGCCAATTAGTCTAGGTGGGCTGGCTAGAAATCCCCAGGGA  597

seq1  TCCTGCTGCCCCAGCCTTCTCAGCACCTGGATTGCAGCCACCATGCCTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCTGCCCCAGCCTTCTCAGCACCTGGATTGCAGCCACCATGCCTTT  647

seq1  CCTATCATTTTAGTTCCGAGGATCAAACTCACTTATTTTCTCACACTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTATCATTTTAGTTCCGAGGATCAAACTCACTTATTTTCTCACACTTGC  697

seq1  ACAGCAAGCACTTTACAAACAGAGCGCCCCAGCCTGAAACAGTGGCTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAAGCACTTTACAAACAGAGCGCCCCAGCCTGAAACAGTGGCTTTA  747

seq1  TTGGTATTCTCGCTCATTTTATAGGTGCGGTTTCTAGAGGTGCGATATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTATTCTCGCTCATTTTATAGGTGCGGTTTCTAGAGGTGCGATATAA  797

seq1  TGCTGAACTGTATGCAGTTGCCAGTTGGCGGGCGAAAACTGTAGGCTGCC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAACTGTATGCAGTTGCCAGTTGGCGGGCGAAAACTGTAGGCTGCC  847

seq1  ATCAGCTGTAGCATAATAATCTCAGCCTCACAGCCAAAAAAAAAAAAAAT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGCTGTAGCATAATAATCTCAGCCTCACAGCCAAAAAAAAAAAAAAT  897

seq1  CTGTTTTTCAGTGTCTGCTCTCTAACATCTAAACCCAGGCTTTTCAATAT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTTCAGTGTCTGCTCTCTAACATCTAAACCCAGGCTTTTCAATAT  947

seq1  TAAACCGAACCCAGTAATACTTGGGCACCCTGCTGGGCCCAGATGAGAGA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACCGAACCCAGTAATACTTGGGCACCCTGCTGGGCCCAGATGAGAGA  997

seq1  CTTAAAACCTGTTTTTTTTTGGCCACCTTTGCCCACCTCCTCAATGGACC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAACCTGTTTTTTTTTGGCCACCTTTGCCCACCTCCTCAATGGACC  1047

seq1  CAAGTCTCAGCCTCTTTCTGTGCTGACAAATATCAGAATTC  1091
      |||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTCAGCCTCTTTCTGTGCTGACAAATATCAGAATTC  1088

seq1: chr8_117635281_117635669
seq2: B6Ng01-043G22.g_64_450

seq1  GAATTCTCTCCTGAGTGAAGCACAATTAAAACTCTGACGACGGCGGCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCTGAGTGAAGCACAATTAAAACTCTGACGACGGCGGCATT  50

seq1  TGGCTTTTGAAATATGTGGGTTCCTGAAAGGCTCCAGTCCACACTGAAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTTGAAATATGTGGGTTCCTGAAAGGCTCCAGTCCACACTGAAAT  100

seq1  TTCTGTACCTGCTACATAAATGCCCGGGACAGCCTTGCCCAAAAGGTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTACCTGCTACATAAATGCCCGGGACAGCCTTGCCCAAAAGGTATT  150

seq1  CTTTCTTGACGTTTCTCCCAGGATGCATTACAGCCTGTAGTAGGTTTTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTGACGTTTCTCCCAGGATGCATTACAGCCTGTAGTAGGTTTTCA  200

seq1  GAGAAAAGTCCGAAGACCTTAAAAGCCTAAGACGAAGTGAGCTCCACACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAGTCCGAAGACCTTAAAAGCCTAAGACGAAGTGAGCTCCACACC  250

seq1  AGAGCTGGGGCAAGGGGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTGGGGCAAGGGGAGAGAGGGAGAGAGAGAGAGAGAGAGAGAGAGA  300

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAATT  350
      |||||||||||||||||||||||||||||         |     |  |||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAG-TTTTTTTTGTTTTTGTTATT  349

seq1  CCACGTGTGGATCTGTCACACTGGTGAAGGTTTGGAGGG  389
         |||||| ||||||  |  ||||||||||||| ||||
seq2  -TTCGTGTGTATCTGTTTCTTTGGTGAAGGTTTGTAGGG  387