BAC Information

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BAC

Clone NameB6Ng01-043L12
Chromosome8 (Build37)
Map Location 130,111,736 - 130,250,773
singlet/doubletdoublet
Overlap genePard3
Upstream geneIrf2bp2, Tomm20, Rbm34, LOC100043368, Gabarapl2-ps8_1688.1, EG628847
Downstream geneNrp1, LOC668494, Itgb1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043L12.bB6Ng01-043L12.g
ACCDH869697DH869698
length1,131409
definitionDH869697|Mus musculus domesticus DNA, BAC clone: B6Ng01-043L12, 5' end.DH869698|Mus musculus domesticus DNA, BAC clone: B6Ng01-043L12, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(130,111,736 - 130,112,876)(130,250,364 - 130,250,773)
sequence
gaattcatcagttgcattaagcattcctttccctctgcaaactctctttg
ttcctctaaggagatgggtccagaattcaagctcacaagagagtatgact
aggttcaatttgtattggaaggagaaggtggactagtaggctgtaaggat
gagacccatttcagatatttggtacactttagtagccaccaggcattcct
tttggataccagaatctgtggatgcccaagttccttttataatgttaaag
aatatttgcatataaaaatctatgaacatatatgcccgtatactttaaat
cctgtctaggtttgtaacacctgacacccatgatccccatgtaaattacc
agtatgcttaattatgtacagactcagaataacaacagtttaaaagttac
taatgagctggtgaaatggctcagttggtaaaggtacttgttgccaagta
cctgagcagtggaaggaaaacgttggtctctctagcaccaagaggttgca
ttctcgcaattttaatgagtcgtttgataaagccccaaacttctaaaaag
ttaagggggcagagagattgcaaagaggttaagcacaccgacttttcttc
ctgagaacctgggttcaattcccaggacccacctgttgtctcaaccttct
gttaattccagtcccaggagatctgatgccctcctgtggcctctgtgggc
actgcatatacgtgatgcagtagtatgcctgcctgtcaaacatccataca
tataaaaacacatagtaaaaataaacaaaaaattaacagctgatcttaac
agcttccttcccacccccaatattttctacacatgggcctgctgagcccc
aggaataactctatctccaaacccactgcatctgtccctcaggactgcca
ttcagagatcaaagggctgcagttgacatggtagaaataatgacttagaa
agcaaacagaaaacagcagtgcagaatataaagtagtggtagctactgac
tgccactgccctttgtgtttgcttgtcttggatcaaacaatacattaagt
catgttaaattaagtaaaataatatttatatttccggtttttctgcggtg
tggcacacacacctttcctggtgttttgggt
tccctaatcatttacttgggggcacaatattgccttcttgtgtcagcata
caaaatcaggttaggcaaaatcatctcactttcccttgttgcttggagca
ggaacttattacgttgttgagagagagagagagagagagagagagagaga
gagagagagagagagagagagagagagagaggagagaatgtagctctatg
caggtatgtgttctgtctgcactttttggagcggggtatgtatgcatagt
atctacattgagaagggtctcagaatagcaactacattgttagaagaagg
gtgtgtacatggcctaaagcaagtggagtctcagattgttaaactattcc
ctatttttgcctgacacaaaagtagatgaagactatttggagatgaggga
aaggaccat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_130111736_130112876
seq2: B6Ng01-043L12.b_46_1176

seq1  GAATTCATCAGTTGCATTAAGCATTCCTTTCCCTCTGCAAACTCTCTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCAGTTGCATTAAGCATTCCTTTCCCTCTGCAAACTCTCTTTG  50

seq1  TTCCTCTAAGGAGATGGGTCCAGAATTCAAGCTCACAAGAGAGTATGACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCTAAGGAGATGGGTCCAGAATTCAAGCTCACAAGAGAGTATGACT  100

seq1  AGGTTCAATTTGTATTGGAAGGAGAAGGTGGACTAGTAGGCTGTAAGGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCAATTTGTATTGGAAGGAGAAGGTGGACTAGTAGGCTGTAAGGAT  150

seq1  GAGACCCATTTCAGATATTTGGTACACTTTAGTAGCCACCAGGCATTCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCCATTTCAGATATTTGGTACACTTTAGTAGCCACCAGGCATTCCT  200

seq1  TTTGGATACCAGAATCTGTGGATGCCCAAGTTCCTTTTATAATGTTAAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGATACCAGAATCTGTGGATGCCCAAGTTCCTTTTATAATGTTAAAG  250

seq1  AATATTTGCATATAAAAATCTATGAACATATATGCCCGTATACTTTAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTTGCATATAAAAATCTATGAACATATATGCCCGTATACTTTAAAT  300

seq1  CCTGTCTAGGTTTGTAACACCTGACACCCATGATCCCCATGTAAATTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCTAGGTTTGTAACACCTGACACCCATGATCCCCATGTAAATTACC  350

seq1  AGTATGCTTAATTATGTACAGACTCAGAATAACAACAGTTTAAAAGTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGCTTAATTATGTACAGACTCAGAATAACAACAGTTTAAAAGTTAC  400

seq1  TAATGAGCTGGTGAAATGGCTCAGTTGGTAAAGGTACTTGTTGCCAAGTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAGCTGGTGAAATGGCTCAGTTGGTAAAGGTACTTGTTGCCAAGTA  450

seq1  CCTGAGCAGTGGAAGGAAAACGTTGGTCTCTCTAGCACCAAGAGGTTGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAGCAGTGGAAGGAAAACGTTGGTCTCTCTAGCACCAAGAGGTTGCA  500

seq1  TTCTCGCAATTTTAATGAGTCGTTTGATAAAGCCCCAAACTTCTAAAAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCGCAATTTTAATGAGTCGTTTGATAAAGCCCCAAACTTCTAAAAAG  550

seq1  TTAAGGGGGCAGAGAGATTGCAAAGAGGTTAAGCACACCGACTTTTCTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGGGGGCAGAGAGATTGCAAAGAGGTTAAGCACACCGACTTTTCTTC  600

seq1  CTGAGAACCTGGGTTCAATTCCCAGGACCCACCTGTTGTCTCAACCTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAACCTGGGTTCAATTCCCAGGACCCACCTGTTGTCTCAACCTTCT  650

seq1  GTTAATTCCAGTCCCAGGAGATCTGATGCCCTCCTGTGGCCTCTGTGGGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATTCCAGTCCCAGGAGATCTGATGCCCTCCTGTGGCCTCTGTGGGC  700

seq1  ACTGCATATACGTGATGCAGTAGTATGCCTGCCTGTCAAACATCCATACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCATATACGTGATGCAGTAGTATGCCTGCCTGTCAAACATCCATACA  750

seq1  TATAAAAACACATAGTAAAAATAAACAAAAAATTAACAGCTGATCTTAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAACACATAGTAAAAATAAACAAAAAATTAACAGCTGATCTTAAC  800

seq1  AGCTTCCTTCCCACCCCCAATATTTTCTACACAT-GGCCTGCTGAGCCCC  849
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGCTTCCTTCCCACCCCCAATATTTTCTACACATGGGCCTGCTGAGCCCC  850

seq1  AGGAATAACTCTATCTCCAAACCCACTGCATCTGTCCCTCAGGACTGCCA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATAACTCTATCTCCAAACCCACTGCATCTGTCCCTCAGGACTGCCA  900

seq1  TTCAGAGATCAAGGGGCTGCAGTTGACATGGTAGAAATAAATGACTTAGG  949
      |||||||||||| ||||||||||||||||||||||||| ||||||||| |
seq2  TTCAGAGATCAAAGGGCTGCAGTTGACATGGTAGAAAT-AATGACTTA-G  948

seq1  AAAGCAAACAGAAAACAGCAGTGCAGAATATAAAGTAGTGGTAGCTACTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAAACAGAAAACAGCAGTGCAGAATATAAAGTAGTGGTAGCTACTG  998

seq1  ACTGCCAACTGCCCTCTTGTGTTTGGCTTGTCTTGGATCAAAACAATACA  1049
      |||||| |||||||| |||||||| |||||||||||||| ||||||||||
seq2  ACTGCC-ACTGCCCT-TTGTGTTT-GCTTGTCTTGGATC-AAACAATACA  1044

seq1  TTAAGTCAATGGTTAAATTTAAGGTAAAATAATATTTATAATTTCTGTTT  1099
      ||||||||   ||||||||  | ||||||||||||||||| || | ||||
seq2  TTAAGTCA--TGTTAAATT--AAGTAAAATAATATTTATATTTCCGGTTT  1090

seq1  TTCTGGGCGGTGGTGG--CACACACCTTT-CTGGTGGTTTTGGGT  1141
      ||||  ||||| ||||  ||||||||||| ||||| |||||||||
seq2  TTCT--GCGGT-GTGGCACACACACCTTTCCTGGT-GTTTTGGGT  1131

seq1: chr8_130250364_130250773
seq2: B6Ng01-043L12.g_66_479 (reverse)

seq1  TGGTCCTTTCCCTCATCTCCAAATAGTCTTCCTCTACTTTTGTGTCAGGC  50
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGGTCCTTTCCCTCATCTCCAAATAGTCTTCATCTACTTTTGTGTCAGGC  50

seq1  AAAAATAGGGAATAGTTTAACAATCTGAGACTCCACTTGCTTTAGGCCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATAGGGAATAGTTTAACAATCTGAGACTCCACTTGCTTTAGGCCAT  100

seq1  GTACACACCCTTCTTCTAACAATGTAGTTGCTATTCTGAGACCCTTCTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GTACACACCCTTCTTCTAACAATGTAGTTGCTATTCTGAGACCCTTCTCA  150

seq1  ATGTAGATACTATGCATACATACCCCGCTCCAAAAAGTGCAGACAGAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAGATACTATGCATACATACCCCGCTCCAAAAAGTGCAGACAGAACA  200

seq1  CATACCTGCATAGAGCTACATTCTCTC----CTCTCTCTCTCTCTCTCTC  246
      |||||||||||||||||||||||||||    |||||||||||||||||||
seq2  CATACCTGCATAGAGCTACATTCTCTCCTCTCTCTCTCTCTCTCTCTCTC  250

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAACAACGTAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCAACAACGTAA  300

seq1  TAAGTTCCTGCTCCAAGCAACAAGGGAAAGTGAGATGATTTTGCCTAACC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTTCCTGCTCCAAGCAACAAGGGAAAGTGAGATGATTTTGCCTAACC  350

seq1  TGATTTTGTATGCTGACACAAGAAGGCAATATTGTGCCCCCAAGTAAATG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTTGTATGCTGACACAAGAAGGCAATATTGTGCCCCCAAGTAAATG  400

seq1  ATTAGGGAGAATTC  410
      ||||||||||||||
seq2  ATTAGGGAGAATTC  414