BAC Information

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BAC

Clone NameB6Ng01-044J20
Chromosome8 (Build37)
Map Location 58,126,704 - 58,127,834
singlet/doubletsinglet
Overlap genenone
Upstream geneGm392, LOC100040212, Gm1153, EG664808, EG664818, EG664834, EG664859, EG664876, LOC100040356
Downstream geneLOC664916, Adam29, Glra3, LOC664812, Hpgd, LOC664948, BC088983, Fbxo8, LOC100040431
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-044J20.bB6Ng01-044J20.g
ACCDH870318DH870319
length1,119712
definitionDH870318|Mus musculus domesticus DNA, BAC clone: B6Ng01-044J20, 5' end.DH870319|Mus musculus domesticus DNA, BAC clone: B6Ng01-044J20, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcataccaagtttgtctttctcagtctaggttacctcactgagaaa
gatattttttttctggttccatccatttgcctgtaaattcatgatgttat
ttatttttaagagctgagcactgaaggcttcatttaactgaaggaaagct
acttcttttgaaaataactatgaaaagacaagcagtactcttttttatgt
atattttttcctttgtggcaaattattttgctgtgtttgctatctaaagt
tttactttttgtctttatgtaaagctttcaactctataaaatacatctaa
agctcccagtaatatgaaatatgaccaatacagcggtgaatcaccttatg
ttttagagcctcttaagactgtccacattgcactattttattaataaaaa
gtcacatatatttatagttcagttatgaaactaatcacaagcaaaagaac
aaagagtttcataaattaatgatcgaatagatgaataacaaagcattatt
agaagagagaataaagggatataaagttccaccctgtgtgtttgagaaag
acactgaaatcatcaactcagcacccaacttgcctgcactgagcatgtac
aagaactgacctgtgagcaatccatcatggatggatgaagaactttgaga
ccataacattcacccatggaatactgactattagtagattcttggaaaaa
aaagtcattattttcagttgtgtgcccactgctggttctaccaggtctcc
atacatatctccaaagccaattatgcatgtaggcagcctggattaaacac
agcagtccacaaatcaaaactaataaacaaaaatgtgaggaaaacttttc
cagtttattaaacaaagattcttttctcatatgatataacctgaataata
tccctgctccctctactactccatgttcctccccattttctgtctggatt
tactctctttttgtctttcattaaaaagaatatgcttccagagagagcac
aaacataaagtataaataaataaagataaataaaaccttcatgtcaagtt
ggacaacaacaacagaaacttaaaagaagcctaatgaagtcccaagagga
attggtgagaaggtaagta

gaattctcacaagaggaaactcaaatggctgagaaacgcttgaaatgttc
aatatccttagttgtcagggaaatgcaaatctaagctattttgaaattta
atcttacacccataagaatagctaagataaataaaacaagtgacaacttt
actggggaggatgtggagtaaggggagtacatacttgtacagccactatg
gagatcactgtgacagtccctcaggaagctgcaaataaatctacctcaag
atatacttgcttaatcatgttcattgcctttctagtcatagtaggcagaa
cttacaaactacccatatgcatatcacaagatggataaagaaaatgtaca
ttttcacaatgcattattactcagccccttaagaaaaatgaaatcatgta
ttcccatctaattggatgtagctagaaaacatcatactcagtgacaggat
caaaaagacaagtatggtaagtatttaattacatgtggacatgagctagt
aagtcaatgacaaccaagttacaaccagtagaaccacagaggatatgtaa
tatgtatggcattgggagtagggaggtaagaaataaataaaatagttagg
tatggctgggagttgggctggaatgggaggatcatgtctagaagagggtg
agagagggaatatagggagggtaactgattctacttcttttttagtgtca
ttattgatttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_58126704_58127834
seq2: B6Ng01-044J20.b_48_1166 (reverse)

seq1  TACCTACCCTCTCAC--ATTCCTCTTGTGACTTCATTTAGGGCTCTTTTA  48
      ||| |||| ||||||  |||||||||| ||||||| |||||  |||||||
seq2  TACTTACCTTCTCACCAATTCCTCTTGGGACTTCA-TTAGGCTTCTTTTA  49

seq1  AGTTTCTGTTGTTGTTTGTCCAACTTTGACATGAAGGTTTTTATTTTATC  98
      |||||||||||||| ||||||||| ||||||||||||||||   ||||||
seq2  AGTTTCTGTTGTTG-TTGTCCAAC-TTGACATGAAGGTTTT--ATTTATC  95

seq1  TTTTATTTTATTTTATACTTTTATGTTTTGTTGCTCTCTCTTGGAAGCAT  148
       |||||||   ||||||| |||||||||   ||||||||| |||||||||
seq2  -TTTATTT--ATTTATAC-TTTATGTTT--GTGCTCTCTC-TGGAAGCAT  138

seq1  ATTCTTTTTTAATGAAAGACAAAAAGAGAGTAAATCCAGACAGAAAATGG  198
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTC-TTTTTAATGAAAGACAAAAAGAGAGTAAATCCAGACAGAAAATGG  187

seq1  GGAGGAACATGGAGTAGTAGAGGGAGCAGGGATATTATTCAGGTTATATC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAACATGGAGTAGTAGAGGGAGCAGGGATATTATTCAGGTTATATC  237

seq1  ATATGAGAAAAGAATCTTTGTTTAATAAACTGGAAAAGTTTTCCTCACAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGAAAAGAATCTTTGTTTAATAAACTGGAAAAGTTTTCCTCACAT  287

seq1  TTTTGTTTATTAGTTTTGATTTGTGGACCTGCTGTGTTTAATCCAGGCTG  348
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  TTTTGTTTATTAGTTTTGATTTGTGGA-CTGCTGTGTTTAATCCAGGCTG  336

seq1  CCTACATGCATAATTGGCTTTGGAGATATGTATGGAGACCTGGTAGAACC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACATGCATAATTGGCTTTGGAGATATGTATGGAGACCTGGTAGAACC  386

seq1  AGCAGTGGGCACACAACTGAAAATAATGACTTTTTTTTCCAAGAATCTAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTGGGCACACAACTGAAAATAATGACTTTTTTTTCCAAGAATCTAC  436

seq1  TAATAGTCAGTATTCCATGGGTGAATGTTATGGTCTCAAAGTTCTTCATC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATAGTCAGTATTCCATGGGTGAATGTTATGGTCTCAAAGTTCTTCATC  486

seq1  CATCCATGATGGATTGCTCACAGGTCAGTTCTTGTACATGCTCAGTGCAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCATGATGGATTGCTCACAGGTCAGTTCTTGTACATGCTCAGTGCAG  536

seq1  GCAAGTTGGGTGCTGAGTTGATGATTTCAGTGTCTTTCTCAAACACACAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGTTGGGTGCTGAGTTGATGATTTCAGTGTCTTTCTCAAACACACAG  586

seq1  GGTGGAACTTTATATCCCTTTATTCTCTCTTCTAATAATGCTTTGTTATT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGAACTTTATATCCCTTTATTCTCTCTTCTAATAATGCTTTGTTATT  636

seq1  CATCTATTCGATCATTAATTTATGAAACTCTTTGTTCTTTTGCTTGTGAT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTATTCGATCATTAATTTATGAAACTCTTTGTTCTTTTGCTTGTGAT  686

seq1  TAGTTTCATAACTGAACTATAAATATATGTGACTTTTTATTAATAAAATA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCATAACTGAACTATAAATATATGTGACTTTTTATTAATAAAATA  736

seq1  GTGCAATGTGGACAGTCTTAAGAGGCTCTAAAACATAAGGTGATTCACCG  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAATGTGGACAGTCTTAAGAGGCTCTAAAACATAAGGTGATTCACCG  786

seq1  CTGTATTGGTCATATTTCATATTACTGGGAGCTTTAGATGTATTTTATAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATTGGTCATATTTCATATTACTGGGAGCTTTAGATGTATTTTATAG  836

seq1  AGTTGAAAGCTTTACATAAAGACAAAAAGTAAAACTTTAGATAGCAAACA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGAAAGCTTTACATAAAGACAAAAAGTAAAACTTTAGATAGCAAACA  886

seq1  CAGCAAAATAATTTGCCACAAAGGAAAAAATATACATAAAAAAGAGTACT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCAAAATAATTTGCCACAAAGGAAAAAATATACATAAAAAAGAGTACT  936

seq1  GCTTGTCTTTTCATAGTTATTTTCAAAAGAAGTAGCTTTCCTTCAGTTAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTCTTTTCATAGTTATTTTCAAAAGAAGTAGCTTTCCTTCAGTTAA  986

seq1  ATGAAGCCTTCAGTGCTCAGCTCTTAAAAATAAATAACATCATGAATTTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGCCTTCAGTGCTCAGCTCTTAAAAATAAATAACATCATGAATTTA  1036

seq1  CAGGCAAATGGATGGAACCAGAAAAAAAATATCTTTCTCAGTGAGGTAAC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCAAATGGATGGAACCAGAAAAAAAATATCTTTCTCAGTGAGGTAAC  1086

seq1  CTAGACTGAGAAAGACAAACTTGGTATGAATTC  1131
      |||||||||||||||||||||||||||||||||
seq2  CTAGACTGAGAAAGACAAACTTGGTATGAATTC  1119


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