BAC Information

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BAC

Clone NameB6Ng01-045G15
Chromosome8 (Build37)
Map Location 129,380,108 - 129,529,447
singlet/doubletdoublet
Overlap geneTomm20, Rbm34, LOC100043368
Upstream geneE330039K12Rik, BC021891, Kcnk1, Slc35f3, LOC668434, 1810063B05Rik, EG619653, Irf2bp2
Downstream geneGabarapl2-ps8_1688.1, Pard3, EG628847
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-045G15.bB6Ng01-045G15.g
ACCDH870875DH870876
length919836
definitionDH870875|Mus musculus domesticus DNA, BAC clone: B6Ng01-045G15, 5' end.DH870876|Mus musculus domesticus DNA, BAC clone: B6Ng01-045G15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,380,108 - 129,381,030)(129,528,612 - 129,529,447)
sequence
gaattctgtgtcctgtgcatcttaccacagttaaggatggctgtagcttt
aaatttctgaataatcttgggatgaagaaggatgaaaggctaggtcttgc
cttccagtgctgagacccactgatgatgctcgcatttagagcccaatcgt
aatcttgaagccacacacctgcttccctgcttcagcatgaagctgggcca
cagagagcatgaggggagctctctgtgctgggaacaactctgtgctggag
aggacagctctctttgctggggaggacagctctctgtgctggggaggaca
gctctctttgctggggaggacagctctctgtgctggggaggacagctctg
tgctgggaaggacagctctctgtactggggaggacagctctgtgctggag
aggacagctctctatgctgggggggacagctctgtgctggagaggacagc
tctctttgctggggaggacagctctttgctggggaggacagctctctgtg
ctggggaggacagctctctgtgctggggagggcagctctctgtgctgggg
agggcagctctctgtgctggggaggacagctctctgtgctggggaggaca
gctctctgtgctggggaggacagctctctgtgctggggaggacagctctc
tgtgctggggaggacagctctctgtacaggggaggacagctctctgtgct
ggggaggacagctctctgtacaggggaggacagctctctgtgctggggag
gacagctctctgtcaggggaggacagctctctgtgctggggaggacagct
ctctgtacaggggaggacagctctctgtgctggggaggacagcttctctt
tctgggggaggtagctctcttttctgggggacgagggactcttcaccttt
cccacgctaaggactggaa
gaattccacctcgtgaaaaactaagccaaagccattcgcctaaactcctc
ctagactaaggagccttagacctgaggtgaaatgcttcaggtgttttaag
ccattagatttggtatgatctgttagataactaagtgttatgtatattat
ctgtggtcggaggaattatcttgcaaaaatgcactcatgaccataaaatc
tactgttcttctaatgagtaagaagcagccatgataaaataatggcccgc
taagggctgtaatgaagataaagctgacagtttgcaagtttgaggttcta
tagcataattagcactttagagcagtggttctcaaccttcctaatgcttc
gcggccctttaacacagttccccatgctgtggtgaccctcaaccataaaa
ttattttcattgcttcttcataactataatttttctgctgttatgaatta
taatgtaaatgtctgatatgcaagttatctgacatatacccctgtgaaag
agtcatggggttgcgaccagaggttgacaatctctgccttagagcaagcg
tttctcctcaaaccagaaaggatagttgcaagaatgagcagaacagagat
aaagttgcccagttagggtgttatataaggtttcttacttcagaaatgaa
atttgatatactgtagatgcctccaaaatcagcaagactgcttcaaacac
aatagtccccctccctggatacttggatttatacaaaacactttaaaaat
taaaatctagtagttgatgcatcttatgcatactttacataaaatgtaat
tcattagaattaaaagtttttctcagcactcgggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_129380108_129381030
seq2: B6Ng01-045G15.b_41_959

seq1  GAATTCTGTGTCCTGTGCATCTTACCACAGTTAAGGATGGCTGTAGCTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGTCCTGTGCATCTTACCACAGTTAAGGATGGCTGTAGCTTT  50

seq1  AAATTTCTGAATAATCTTGGGATGAAGAAGGATGAAAGGCTAGGTCTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCTGAATAATCTTGGGATGAAGAAGGATGAAAGGCTAGGTCTTGC  100

seq1  CTTCCAGTGCTGAGACCCACTGATGATGCTCGCATTTAGAGCCCAATCGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGTGCTGAGACCCACTGATGATGCTCGCATTTAGAGCCCAATCGT  150

seq1  AATCTTGAAGCCACACACCTGCTTCCCTGCTTCAGCATGAAGCTGGGCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTGAAGCCACACACCTGCTTCCCTGCTTCAGCATGAAGCTGGGCCA  200

seq1  CAGAGAGCATGAGGGGAGCTCTCTGTGCTGGGAACAACTCTGTGCTGGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGCATGAGGGGAGCTCTCTGTGCTGGGAACAACTCTGTGCTGGAG  250

seq1  AGGACAGCTCTCTTTGCTGGGGAGGACAGCTCTCTGTGCTGGGGAGGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGCTCTCTTTGCTGGGGAGGACAGCTCTCTGTGCTGGGGAGGACA  300

seq1  GCTCTCTTTGCTGGGGAGGACAGCTCTCTGTGCTGGGGAGGACAGCTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTTTGCTGGGGAGGACAGCTCTCTGTGCTGGGGAGGACAGCTCTG  350

seq1  TGCTGGGAAGGACAGCTCTCTGTACTGGGGAGGACAGCTCTGTGCTGGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGGAAGGACAGCTCTCTGTACTGGGGAGGACAGCTCTGTGCTGGAG  400

seq1  AGGACAGCTCTCTATGCTGGGGGGGACAGCTCTGTGCTGGAGAGGACAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACAGCTCTCTATGCTGGGGGGGACAGCTCTGTGCTGGAGAGGACAGC  450

seq1  TCTCTTTGCTGGGGAGGACAGCTCTTTGCTGGGGAGGACAGCTCTCTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTGCTGGGGAGGACAGCTCTTTGCTGGGGAGGACAGCTCTCTGTG  500

seq1  CTGGGGAGGACAGCTCTCTGTGCTGGGGAGGGCAGCTCTCTGTGCTGGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGAGGACAGCTCTCTGTGCTGGGGAGGGCAGCTCTCTGTGCTGGGG  550

seq1  AGGGCAGCTCTCTGTGCTGGGGAGGACAGCTCTCTGTGCTGGGGAGGACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAGCTCTCTGTGCTGGGGAGGACAGCTCTCTGTGCTGGGGAGGACA  600

seq1  GCTCTCTGTGCTGGGGAGGACAGCTCTCTGTGCTGGGGAGGACAGCTCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTCTGTGCTGGGGAGGACAGCTCTCTGTGCTGGGGAGGACAGCTCTC  650

seq1  TGTGCTGGGGAGGACAGCTCTCTGTACAGGGGAGGACAGCTCTCTGTGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTGGGGAGGACAGCTCTCTGTACAGGGGAGGACAGCTCTCTGTGCT  700

seq1  GGGGAGGACAGCTCTCTGTACAGGGGAGGACAGCTCTCTGTGCTGGGGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGAGGACAGCTCTCTGTACAGGGGAGGACAGCTCTCTGTGCTGGGGAG  750

seq1  GACAGCTCTCTGTACAGGGGAGGACAGCTCTCTGTGCTGGGGAGGACAGC  800
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GACAGCTCTCTGT-CAGGGGAGGACAGCTCTCTGTGCTGGGGAGGACAGC  799

seq1  TCTCTGTACAGGGGAGGACAGCTCTCTGTGCTGGGGAGGACAGC-TCTCT  849
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TCTCTGTACAGGGGAGGACAGCTCTCTGTGCTGGGGAGGACAGCTTCTCT  849

seq1  GTACTGGGGAGGACAGCCCTCTATGCTGGGGGACAGGGGACTCTCTGACT  899
       | ||||||  |  ||| |||| | |||||||||  ||||||||    ||
seq2  -TTCTGGGGGAGGTAGCTCTCTTTTCTGGGGGACGAGGGACTCTTCACCT  898

seq1  TTCCCAACAGCTAAGGACTTGGAA  923
      ||||||   ||||||||| |||||
seq2  TTCCCA--CGCTAAGGAC-TGGAA  919

seq1: chr8_129528612_129529447
seq2: B6Ng01-045G15.g_68_903 (reverse)

seq1  CTCCCGAGTGCTGAGAAAAACTTTTAATTCTAATGAATTACATTTTATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCGAGTGCTGAGAAAAACTTTTAATTCTAATGAATTACATTTTATGT  50

seq1  AAAGTATGCATAAGATGCATCAACTACTAGATTTTAATTTTTAAAGTGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTATGCATAAGATGCATCAACTACTAGATTTTAATTTTTAAAGTGTT  100

seq1  TTGTATAAATCCAAGTATCCAGGGAGGGGGACTATTGTGTTTGAAGCAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATAAATCCAAGTATCCAGGGAGGGGGACTATTGTGTTTGAAGCAGT  150

seq1  CTTGCTGATTTTGGAGGCATCTACAGTATATCAAATTTCATTTCTGAAGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTGATTTTGGAGGCATCTACAGTATATCAAATTTCATTTCTGAAGT  200

seq1  AAGAAACCTTATATAACACCCTAACTGGGCAACTTTATCTCTGTTCTGCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAACCTTATATAACACCCTAACTGGGCAACTTTATCTCTGTTCTGCT  250

seq1  CATTCTTGCAACTATCCTTTCTGGTTTGAGGAGAAACGCTTGCTCTAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTTGCAACTATCCTTTCTGGTTTGAGGAGAAACGCTTGCTCTAAGG  300

seq1  CAGAGATTGTCAACCTCTGGTCGCAACCCCATGACTCTTTCACAGGGGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGATTGTCAACCTCTGGTCGCAACCCCATGACTCTTTCACAGGGGTA  350

seq1  TATGTCAGATAACTTGCATATCAGACATTTACATTATAATTCATAACAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCAGATAACTTGCATATCAGACATTTACATTATAATTCATAACAGC  400

seq1  AGAAAAATTATAGTTATGAAGAAGCAATGAAAATAATTTTATGGTTGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATTATAGTTATGAAGAAGCAATGAAAATAATTTTATGGTTGAGG  450

seq1  GTCACCACAGCATGGGGAACTGTGTTAAAGGGCCGCGAAGCATTAGGAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCACAGCATGGGGAACTGTGTTAAAGGGCCGCGAAGCATTAGGAAG  500

seq1  GTTGAGAACCACTGCTCTAAAGTGCTAATTATGCTATAGAACCTCAAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGAGAACCACTGCTCTAAAGTGCTAATTATGCTATAGAACCTCAAACT  550

seq1  TGCAAACTGTCAGCTTTATCTTCATTACAGCCCTTAGCGGGCCATTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAACTGTCAGCTTTATCTTCATTACAGCCCTTAGCGGGCCATTATTT  600

seq1  TATCATGGCTGCTTCTTACTCATTAGAAGAACAGTAGATTTTATGGTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCATGGCTGCTTCTTACTCATTAGAAGAACAGTAGATTTTATGGTCAT  650

seq1  GAGTGCATTTTTGCAAGATAATTCCTCCGACCACAGATAATATACATAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCATTTTTGCAAGATAATTCCTCCGACCACAGATAATATACATAAC  700

seq1  ACTTAGTTATCTAACAGATCATACCAAATCTAATGGCTTAAAACACCTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGTTATCTAACAGATCATACCAAATCTAATGGCTTAAAACACCTGA  750

seq1  AGCATTTCACCTCAGGTCTAAGGCTCCTTAGTCTAGGAGGAGTTTAGGCG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTTCACCTCAGGTCTAAGGCTCCTTAGTCTAGGAGGAGTTTAGGCG  800

seq1  AATGGCTTTGGCTTAGTTTTTCACGAGGTGGAATTC  836
      ||||||||||||||||||||||||||||||||||||
seq2  AATGGCTTTGGCTTAGTTTTTCACGAGGTGGAATTC  836