BAC Information

Click to search

BAC

Clone NameB6Ng01-046E19
Chromosome8 (Build37)
Map Location 4,641,451 - 4,642,256
singlet/doubletsinglet
Overlap geneLOC665021
Upstream geneStxbp2, Retn, 1810033B17Rik, LOC664858, Trappc5, Fcer2a, Clec4g, Cd209a, LOC664870, Cd209e, Cd209d, Cd209b, Cd209c, LOC664888, EG384770, EG664905, LOC664915, LOC664922, LOC631071, Cd209f, Cd209g, B130050I23Rik, BC068157, Lrrc8e, Map2k7, LOC100039590, Snapc2, Ctxn1, Timm44, Elavl1, Ccl25, LOC664977, Ppia-ps8_36.1, Lass4, Vmn2r-ps89, EG633533, BC003267
Downstream geneEG623133, EG665044, EG623223, LOC100040234, Shcbp1, EG622568, LOC669393, EG631359, LOC100039687, LOC436026, Slc10a2, LOC434275, LOC623409, LOC669429
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046E19.bB6Ng01-046E19.g
ACCDH871508DH871509
length808904
definitionDH871508|Mus musculus domesticus DNA, BAC clone: B6Ng01-046E19, 5' end.DH871509|Mus musculus domesticus DNA, BAC clone: B6Ng01-046E19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatgttctgaaatgagaagttgcttggtgggttatgtgtgaggtt
tctgtagaatccagtcctgtgagctttctttaaccccgtgcacaaaccaa
catcggataactttacatgtcccttggcatccagtaaaaggatgtctggt
ttgatgtcccggtggatgaagcccagctggtgaattgcatctatcgtcaa
gacagtctctgagatgtagaactgtgtctcctattctgttaaggtgtcct
tcttcatcagcaatgtcatcatgtcacctccaggaagaaattccatgatg
agatagagattccgtttgtcctgaaaactgtagaatatctttaccaccca
ggctccatctgcttccaccaaaatgtccctttctgctcggatatgagcca
cctgctctttctcaagcatgtcagctttcctcaggatcttcatggcacag
atgtgccccttgtctttcttctggaccagccgcacctctccgaaagctcc
tcttcctataaccttcagagactcaaagtcatccaggccaagtctggtcc
tcttaaggcgtaagaactgtttcttttatgagcatgctgcgatcgacgta
acgttttctcctcatctgccagtccttcttcttccatagccactttctaa
cttcttctgcctcgtttctctctcttcgtgctgtaaaattaggttgctgt
aaaaattctccagtgtgagcttggccacagttactctttcccgggtatgg
ttgcttcataggaaggtaattgttgccctgccatcatttgccatagtaac
tggaagtg
gaattctagtcagaagaatctcaaatggctgagaaacactcaaagaaatg
ttcaacatccttagtcatcaatgaaatgaaaatcaaaacaactctgaaat
tccatcatcttatacccatcagaatgtctaagatcaaaaatgcaagcgac
agctcatgctgtcaaggatgtggagcaatgggaacactcctccactgctg
gtggaagtgcaaatgtatacagccactttggaaatcaatatggcagtttc
tcagaaagctgggtatcaatgtacctgaagatccagatagatcattcctg
ggcatatacccaagagatgatccatcctaccataaggacacgtgttcaaa
tatgtttgtagcagctttatttataatactcagaaactggaaacaaccta
gacatcactcaaccaaagaatgaataaagaaaatgtggtacacttacata
atggactattactcagctgttaaaaacaatggcatcatgaaatttccagg
caaatggatagaactagaaaaaaattatcctgaggtaattcagaaccaga
aagacaaacattgtactcacttataagtggatattagctgtaaagaataa
tcattctacagtctacagattcagcaaggctaagtaacaagaagggctca
aaagggcatgcatgaatctcccaggtaaggggaaatagaatagattttga
gggttggtttggggcaagtggggatggaaacaggagagaacaggaacagg
tggaagggaatcaagatctttctatcgatatctacatatttatatcacct
aatctattatctatctatctcactacctatctatcatctttatacacaca
caccccgcacgagagagagaagagatagagtgagagagagattgagagag
atag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_4641451_4642256
seq2: B6Ng01-046E19.b_32_839 (reverse)

seq1  CACTTCCAGTTACTATGGC-AATGATGGCAGGGGCAACAATTACCTTTCC  49
      ||||||||||||||||||| |||||||||| |||||||||||||| ||||
seq2  CACTTCCAGTTACTATGGCAAATGATGGCA-GGGCAACAATTACC-TTCC  48

seq1  TATG-AGCAACCATACCCGGGAAAGAGTAACTGTGGCCAAGCTCACACTG  98
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAAGCAACCATACCCGGGAAAGAGTAACTGTGGCCAAGCTCACACTG  98

seq1  GAGAATTTTTACAGCAACCTAATTTTACAGCACGAAGAGAGAGAAACGAG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATTTTTACAGCAACCTAATTTTACAGCACGAAGAGAGAGAAACGAG  148

seq1  GCAGAAGAAGTTAG-AAGTGGCTATGGAAGAAGAAGGACTGGCAGATGAG  197
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GCAGAAGAAGTTAGAAAGTGGCTATGGAAGAAGAAGGACTGGCAGATGAG  198

seq1  GAGAAAACGTTACGTCGATCGCAGCATGCTCAT-AAAGAAACAGTTCTTA  246
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GAGAAAACGTTACGTCGATCGCAGCATGCTCATAAAAGAAACAGTTCTTA  248

seq1  CGCCTTAAGAGGACCAGACTTGGCCTGGATGACTTTGAGTCTCTGAAGGT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCTTAAGAGGACCAGACTTGGCCTGGATGACTTTGAGTCTCTGAAGGT  298

seq1  TATAGGAAGAGGAGCTTTCGGAGAGGTGCGGCTGGTCCAGAAGAAAGACA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGGAAGAGGAGCTTTCGGAGAGGTGCGGCTGGTCCAGAAGAAAGACA  348

seq1  AGGGGCACATCTGTGCCATGAAGATCCTGAGGAAAGCTGACATGCTTGAG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGCACATCTGTGCCATGAAGATCCTGAGGAAAGCTGACATGCTTGAG  398

seq1  AAAGAGCAGGTGGCTCATATCCGAGCAGAAAGGGACATTTTGGTGGAAGC  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGCAGGTGGCTCATATCCGAGCAGAAAGGGACATTTTGGTGGAAGC  448

seq1  AGATGGAGCCTGGGTGGTAAAGATATTCTACAGTTTTCAGGACAAACGGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGAGCCTGGGTGGTAAAGATATTCTACAGTTTTCAGGACAAACGGA  498

seq1  ATCTCTATCTCATCATGGAATTTCTTCCTGGAGGTGACATGATGACATTG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTATCTCATCATGGAATTTCTTCCTGGAGGTGACATGATGACATTG  548

seq1  CTGATGAAGAAGGACACCTTAACAGAATAGGAGACACAGTTCTACATCTC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATGAAGAAGGACACCTTAACAGAATAGGAGACACAGTTCTACATCTC  598

seq1  AGAGACTGTCTTGACGATAGATGCAATTCACCAGCTGGGCTTCATCCACC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTGTCTTGACGATAGATGCAATTCACCAGCTGGGCTTCATCCACC  648

seq1  GGGACATCAAACCAGACATCCTTTTACTGGATGCCAAGGGACATGTAAAG  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACATCAAACCAGACATCCTTTTACTGGATGCCAAGGGACATGTAAAG  698

seq1  TTATCCGATGTTGGTTTGTGCACGGGGTTAAAGAAAGCTCACAGGACTGG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCCGATGTTGGTTTGTGCACGGGGTTAAAGAAAGCTCACAGGACTGG  748

seq1  ATTCTACAGAAACCTCACACATAACCCACCAAGCAACTTCTCATTTCAGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTACAGAAACCTCACACATAACCCACCAAGCAACTTCTCATTTCAGA  798

seq1  ACATGAATTC  806
      ||||||||||
seq2  ACATGAATTC  808