BAC Information

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BAC

Clone NameB6Ng01-046G05
Chromosome8 (Build37)2 (Build37)
Map Location 46,593,817 - 46,593,872148,322,457 - 148,323,553
singlet/doubletsingletsinglet
Overlap geneSorbs2
Upstream geneLOC100039508, Fat1, LOC100039673, Mtnr1a, EG622523, F11, Klkb1, Cyp4v3, BC035537, Tlr3
Downstream genePdlim3, Ccdc110, 1700029J07Rik, 1810047C23Rik, Ankrd37, Lrp2bp, Snx25, 4933411K20Rik, Slc25a4, LOC621269, LOC100039875, LOC667325, Helt, LOC667337, Acsl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-046G05.bB6Ng01-046G05.g
ACCDH871568DH871569
length981,082
definitionDH871568|Mus musculus domesticus DNA, BAC clone: B6Ng01-046G05, 5' end.DH871569|Mus musculus domesticus DNA, BAC clone: B6Ng01-046G05, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(46,593,817 - 46,593,872)(148,322,457 - 148,323,553)
sequence
attgatattagtagatattaatgaccaattattgttaatttttgttttgt
tgttgttgtagttgtggtggtggtggtggtgacggtgtgtgtgtgtat
gaattccaaagtaaaatcaaggatggaaaacagccaaactatggaggcac
acagcatcattccaaatctccagatcactatgccaagtaaaacgagccag
acaggaaaatgtgtatgtcattgcactctctgagagtgaaaatgagtctc
tggggacaatgagttggtcactggtcctcatggcccaggacaagaggact
attctgccaagggactttcagaagtagtaatgctcagtatgactgtggtg
gtggtagtggggaatcatcagacctctaaaaccattagagctcctcaaat
tgtgtgcctttaacatgcaccataaataaggatgccacatggccgcttag
ttattcttgaataaagatgataagaaaaacataaatcttaactccaggca
caaaaagaacaatgctatgtcattttcctatcttgaaaggggcctactat
gagtgctactgatacgacaattgtaatatcagataaaatgtgtgacagtt
ccttggcttagtgtggggtccagacctgagcacaaatagaccaaatctgt
ccaagttaaatcccagttggtgagcttcagttaactggttacagctcact
aacaatcaaccaatctagcctcagccagtgaagcttttttgctgcacatg
atttcctgtaaatgttctcaggccagcccacctagcatcctctgactttg
ttttggctctagagctgcccagttcagaaattattttattttgttttgtc
ttgttctgttttgattgttattcttcaagtaaacaactacaaatttaaag
tctgtggtttttctttccttttgcctaaaagttaaatagtatttacttcg
tatcagtgctatgttagagctccatgggtggtgtgggctctgtgccataa
actttatttgcaaccatagacagatggtcagatcttactagaggctgtca
tagcagttttccagatggagcgatgttagtatgcccaggtctaggagtcc
agattatgccaacgaaggtccatgggggtgaaatcagctaggccatgtca
ctctaccactcgcttgttggtagaagtgacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_46593817_46593872
seq2: B6Ng01-046G05.b_96_151 (reverse)

seq1  ATACACACACACACC-CCACCACCACCACCACTAGCAACAACAATAACAA  49
      |||||||||||||||  ||||||||||||||| | |||| |||| |||||
seq2  ATACACACACACACCGTCACCACCACCACCACCA-CAACTACAACAACAA  49

seq1  CAAAACA  56
      |||||||
seq2  CAAAACA  56

seq1: chr2_148322457_148323553
seq2: B6Ng01-046G05.g_69_1150

seq1  GAATTCCAAAGTAAAATCAAGGATGGAAAACAGCCAAACTATGGAGGCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGTAAAATCAAGGATGGAAAACAGCCAAACTATGGAGGCAC  50

seq1  ACAGCATCATTCCAAATCTCCAGATCACTATGCCAAGTAAAACGAGCCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATCATTCCAAATCTCCAGATCACTATGCCAAGTAAAACGAGCCAG  100

seq1  ACAGGAAAATGTGTATGTCATTGCACTCTCTGAGAGTGAAAATGAGTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAAAATGTGTATGTCATTGCACTCTCTGAGAGTGAAAATGAGTCTC  150

seq1  TGGGGACAATGAGTTGGTCACTGGTCCTCATGGCCCAGGACAAGAGGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGACAATGAGTTGGTCACTGGTCCTCATGGCCCAGGACAAGAGGACT  200

seq1  ATTCTGCCAAGGGACTTTCAGAAGTAGTAATGCTCAGTATGACTGTGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGCCAAGGGACTTTCAGAAGTAGTAATGCTCAGTATGACTGTGGTG  250

seq1  GTGGTAGTGGGGAATCATCAGACCTCTAAAACCATTAGAGCTCCTCAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTAGTGGGGAATCATCAGACCTCTAAAACCATTAGAGCTCCTCAAAT  300

seq1  TGTGTGCCTTTAACATGCACCATAAATAAGGATGCCACATGGCCGCTTAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGCCTTTAACATGCACCATAAATAAGGATGCCACATGGCCGCTTAG  350

seq1  TTATTCTTGAATAAAGATGATAAGAAAAACATAAATCTTAACTCCAGGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTTGAATAAAGATGATAAGAAAAACATAAATCTTAACTCCAGGCA  400

seq1  CAAAAAGAACAATGCTATGTCATTTTCCTATCTTGAAAGGGGCCTACTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAGAACAATGCTATGTCATTTTCCTATCTTGAAAGGGGCCTACTAT  450

seq1  GAGTGCTACTGATACGACAATTGTAATATCAGATAAAATGTGTGACAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCTACTGATACGACAATTGTAATATCAGATAAAATGTGTGACAGTT  500

seq1  CCTTGGCTTAGTGTGGGGTCCAGACCTGAGCACAAATAGACCAAATCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGCTTAGTGTGGGGTCCAGACCTGAGCACAAATAGACCAAATCTGT  550

seq1  CCAAGTTAAATCCCAGTTGGTGAGCTTCAGTTAACTGGTTACAGCTCACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTTAAATCCCAGTTGGTGAGCTTCAGTTAACTGGTTACAGCTCACT  600

seq1  AACAATCAACCAATCTAGCCTCAGCCAGTGAAGCTTTTTTGCTGCACATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAATCAACCAATCTAGCCTCAGCCAGTGAAGCTTTTTTGCTGCACATG  650

seq1  ATTTCCTGTAAATGTTCTCAGGCCAGCCCACCTAGCATCCTCTGACTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTGTAAATGTTCTCAGGCCAGCCCACCTAGCATCCTCTGACTTTG  700

seq1  TTTTGGCTCTAGAGCTGCCCAGTTCAGAAATTATTTTATTTTGTTTTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGCTCTAGAGCTGCCCAGTTCAGAAATTATTTTATTTTGTTTTGTC  750

seq1  TTGTTCTGTTTTGATTGTTATTCTTCAAGTAAACAACTACAAATTTAAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCTGTTTTGATTGTTATTCTTCAAGTAAACAACTACAAATTTAAAG  800

seq1  TCTGTGGTTTTTCTTTCCTTTTGCCTAAAAGTTAAATAGTATTTACTTCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGGTTTTTCTTTCCTTTTGCCTAAAAGTTAAATAGTATTTACTTCG  850

seq1  TATCAGGTGCTATGTTAGAGCTCCATGGGTGGTGT-GGCTCTGTGCCAAT  899
      ||||| ||||||||||||||||||||||||||||| ||||||||||||  
seq2  TATCA-GTGCTATGTTAGAGCTCCATGGGTGGTGTGGGCTCTGTGCCA--  897

seq1  AAAACTTTATTTGCAACCATAGACAGATGGTCAGATCTTACTAAGAGGCT  949
       ||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TAAACTTTATTTGCAACCATAGACAGATGGTCAGATCTTACT-AGAGGCT  946

seq1  GTCATTAGCCAGTTTTCCAGATGGAGCGATGTTAGTATGCCCAAGTCCTA  999
      |||| ||| |||||||||||||||||||||||||||||||||| || |||
seq2  GTCA-TAG-CAGTTTTCCAGATGGAGCGATGTTAGTATGCCCAGGT-CTA  993

seq1  GGAGTTCAAGATTTATGCCAACGAAGGGTCAATGGGGGTGAAACACAGCT  1049
      |||| || ||| ||||||||||||| |||| ||||||||||||  |||||
seq2  GGAG-TCCAGA-TTATGCCAACGAA-GGTCCATGGGGGTGAAA-TCAGCT  1039

seq1  AAGGGCACATGGTCACTCAACCAACTCGCTTGTGGTTAAGAGTGACAA  1097
      |  ||| ||| ||||||| ||| |||||||||| | ||  ||||||||
seq2  A--GGC-CAT-GTCACTCTACC-ACTCGCTTGTTGGTAGAAGTGACAA  1082