BAC Information

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BAC

Clone NameB6Ng01-050I05
Chromosome8 (Build37)
Map Location 66,411,699 - 66,412,703
singlet/doubletsinglet
Overlap geneEG244495
Upstream geneSpock3, LOC384831
Downstream geneTll1, LOC100040989, Cpe, Sc4mol, Klhl2, LOC100040903
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050I05.bB6Ng01-050I05.g
ACCDH874434DH874435
length9901,119
definitionDH874434|Mus musculus domesticus DNA, BAC clone: B6Ng01-050I05, 5' end.DH874435|Mus musculus domesticus DNA, BAC clone: B6Ng01-050I05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctttgttttgattgtttgagccaagattttcatgtagctgaggc
tgccctttaatcacttttactctgtctccacttctggaatgctggggtta
caggcttgtttcagaacacttgatgcagttgcttcttaaattatgttttc
ttcttgatgttagcttgcaaaaatataattaatttttagatactgtcctg
tttccagtgaacttgttaattctaacagctatctctttgaattttctatt
aatatacttttgttatttgtatataagaaccattttctttcccctttgca
agccatttttcttactttattgcaatcactacttgttcaaagttggaaaa
gtcataagaggcattcttttaaaaatttttttttttagacctgttggtgg
ttctgcataaacaattccttccagggtgataggacttagccacagtgccg
cagccaggcaatacactgacatccccaacagctcagtttgaatacagcat
gtcaaactgcccttggccagcagaggagggcaggctccagcagtcagttc
tctaggggtgcatagttcagcagtttcccaatcaggtccacgtgtgccag
cagcatgcggcggcagcagtagtgctttagacccagagcgtccagggcat
ccccctcggtgtacccggcctgcagcagacccaggtaggtttcccatttg
tggtgacagtcttcccacaggtgaagcagaacactgggatgatctcggca
gcatctggtgtgcaggctgctggcagcagtttttccaacaacaggcattc
tgcgcttccactgttagtatgatgtgaacgcttggattttctagagcttg
tcagattataaagttccaggatgagacaaatatcacagttcagcaactaa
agctagagagtatctaagcccacagttgtttcatccttcatcttattatt
gtgtatatgtgcatgtatatggtggggggagttgtgagta
gaattctcacccgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgaggaggaagaggaacactcctccattgttagtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactaccagaggatccagcaatacctctcctgggc
atatatccagaagatgtcccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaaaatgaatttatgaaattcctaggcaaa
tggatggacctggagggcattatcctgaatgaggtaacccaatcacaaag
gaactctcacaatatgtactcactgataagtggatattagcccagaaact
taggatacccaagatataagatacaatttgctaaacacattaaactcaag
agaacgaagaccaaagtgtggacactttgccccttcttagaataggaaac
aaaacacccatggaaggagttacagagacaaaatttggaagtgtgatgaa
agggacggaccatctagtgattgccatatccagagatccatcccatgatc
agcttccaaacgctgacaccattgcatacactagcagattttgctgaaag
gacccagatatagctgtctcttgtgagactattcttgggcctagcaaaca
cagagtggatgctcacagtcagctatgatggatcacaggccccatggagg
agctagagaagcataaggactgcacctatagtgacacaatatgactacag
tacctgagctctgtctctagctgctttgttcaaactgctaaagcctcact
ggaaagagtcatgactgcaacttatagtccataaggaagtcaggtccaaa
agaatggtgttaagtgcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_66411699_66412703
seq2: B6Ng01-050I05.b_47_1036 (reverse)

seq1  TACTCAC-ACT-CACCCACCATATACATGCACATATACACAATAATAAAG  48
      ||||||| ||| | ||||||||||||||||||||||||||||||||||  
seq2  TACTCACAACTCCCCCCACCATATACATGCACATATACACAATAATAA--  48

seq1  AATGAAGGAATGAAAACAAACTGTGGGCTTAGATAACTTCTCCTAAGCTT  98
       ||||||| ||||||   |||||||||||||||||    |||   ||| |
seq2  GATGAAGG-ATGAAA--CAACTGTGGGCTTAGATA----CTCTCTAGC-T  90

seq1  TTAGTTTGCCTTGAACTTGTGATATTTTGTCTCATCCTGGAACTTTATTA  148
      |||| ||||  ||||| ||||||| |||||||||||||||||||||| ||
seq2  TTAG-TTGC--TGAAC-TGTGATA-TTTGTCTCATCCTGGAACTTTA-TA  134

seq1  ATCTGACAAGCTCTAGAAAATCCAAGCGTTCACATCATACCTAACAGTGG  198
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATCTGACAAGCTCTAGAAAATCCAAGCGTTCACATCATA-CTAACAGTGG  183

seq1  AAGCGCAGAATGCCTGTTGTTGGAAAAACTGCTGCCAGCAGCCTGCACAC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGCAGAATGCCTGTTGTTGGAAAAACTGCTGCCAGCAGCCTGCACAC  233

seq1  CAGATGCTGCCGAGATCATCCCAGTGTTCTGCTTCACCTGTGGGAAGACT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATGCTGCCGAGATCATCCCAGTGTTCTGCTTCACCTGTGGGAAGACT  283

seq1  GTCACCACAAATGGGAAACCTACCTGGGTCTGCTGCAGGCCGGGTACACC  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCACAAATGGGAAACCTACCTGGGTCTGCTGCAGGCCGGGTACACC  333

seq1  GAGGGGGATGCCCTGGACGCTCTGGGTCTAAAGCACTACTGCTGCCGCCG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGATGCCCTGGACGCTCTGGGTCTAAAGCACTACTGCTGCCGCCG  383

seq1  CATGCTGCTGGCACACGTGGACCTGATTGGGAAACTGCTGAACTATGCAC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTGCTGGCACACGTGGACCTGATTGGGAAACTGCTGAACTATGCAC  433

seq1  CCCTAGAGAACTGACTGCTGGAGCCTGCCCTCCTCTGCTGGCCAAGGGCA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTAGAGAACTGACTGCTGGAGCCTGCCCTCCTCTGCTGGCCAAGGGCA  483

seq1  GTTTGACATGCTGTATTCAAACTGAGCTGTTGGGGATGTCAGTGTATTGC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGACATGCTGTATTCAAACTGAGCTGTTGGGGATGTCAGTGTATTGC  533

seq1  CTGGCTGCGGCACTGTGGCTAAGTCCTATCACCCTGGAAGGAATTGTTTA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCTGCGGCACTGTGGCTAAGTCCTATCACCCTGGAAGGAATTGTTTA  583

seq1  TGCAGAACCACCAACAGGTCTAAAAAAAAAAATTTTTAAAAGAATGCCTC  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAACCACCAACAGGTCTAAAAAAAAAAATTTTTAAAAGAATGCCTC  633

seq1  TTATGACTTTTCCAACTTTGAACAAGTAGTGATTGCAATAAAGTAAGAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGACTTTTCCAACTTTGAACAAGTAGTGATTGCAATAAAGTAAGAAA  683

seq1  AATGGCTTGCAAAGGGGAAAGAAAATGGTTCTTATATACAAATAACAAAA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCTTGCAAAGGGGAAAGAAAATGGTTCTTATATACAAATAACAAAA  733

seq1  GTATATTAATAGAAAATTCAAAGAGATAGCTGTTAGAATTAACAAGTTCA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTAATAGAAAATTCAAAGAGATAGCTGTTAGAATTAACAAGTTCA  783

seq1  CTGGAAACAGGACAGTATCTAAAAATTAATTATATTTTTGCAAGCTAACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAAACAGGACAGTATCTAAAAATTAATTATATTTTTGCAAGCTAACA  833

seq1  TCAAGAAGAAAACATAATTTAAGAAGCAACTGCATCAAGTGTTCTGAAAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGAAGAAAACATAATTTAAGAAGCAACTGCATCAAGTGTTCTGAAAC  883

seq1  AAGCCTGTAACCCCAGCATTCCAGAAGTGGAGACAGAGTAAAAGTGATTA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTGTAACCCCAGCATTCCAGAAGTGGAGACAGAGTAAAAGTGATTA  933

seq1  AAGGGCAGCCTCAGCTACATGAAAATCTTGGCTCAAACAATCAAAACAAA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCAGCCTCAGCTACATGAAAATCTTGGCTCAAACAATCAAAACAAA  983

seq1  GGAATTC  1005
      |||||||
seq2  GGAATTC  990