BAC Information

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BAC

Clone NameB6Ng01-055B02
Chromosome8 (Build37)
Map Location 10,348,721 - 10,484,046
singlet/doubletdoublet
Overlap geneMyo16
Upstream geneTmem28, Lig4, Abhd13, Tnfsf13b
Downstream geneLOC100040008, LOC384782, LOC100040507, LOC665306, Irs2, Col4a1, Col4a2, Rab20
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055B02.bB6Ng01-055B02.g
ACCDH877634DH877635
length983675
definitionDH877634|Mus musculus domesticus DNA, BAC clone: B6Ng01-055B02, 5' end.DH877635|Mus musculus domesticus DNA, BAC clone: B6Ng01-055B02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(10,348,721 - 10,349,708)(10,483,443 - 10,484,046)
sequence
gaattccagtggctcaggatgactcttgtgggcttcagttgggatagaaa
gtacagaggagttggggaaagtgggaatgtttgatctctgtgtggctgga
atgaaaccagagcggtcatggagtgaaggcatggaatagttcacgaagca
ggcacactcaagtctgaatcaaatgccataggcacccaaatgacgctaaa
gtgcagatacagcattcaatccaggggtggcagcctcttgtctgaagaca
aagagtggagtgcaagactatgacttacaaggttggtgaaccgaatactt
cagtgtgtgaaaacaagagtcgttggtggctttttcatgggagtgtgatg
ggatttagttactgtctaatgacactggagggagagtgttcacaattagt
gttgggattagaagtgagaccatgaaagtggaggcctgagtcctgtttat
tttcacacagtatgcatgcccgcacaacttctgggtgagctagaagaaat
ggaaaacattgaaaccccgctgtctagctctgagtcagggactgtaagct
tattttatttttactgtttctggtggtttgtttgatggcttaaaaaattt
ccataaaaaccattattttcttttaaaaagtatttattgttacctaaatg
aggagtctagaagagggcagcagatccctggagctgaaaatcgcaggtgg
ttgtcactcgccctgaggggctgctggggaccaatctctgcaactctgta
actgcagcagctatttacatcttgactaaacaagagacaagatggctgag
acatctcgacaagccttaaatcaacttttcaagtgttccattttctaaat
tttcttcacgtgcttggtatcataaccctgactgttctaggccacaaaga
catgaatccttttgaaattcagtggagtttcatccaggaactttctcatc
tttccattgtgacttgatgacgtccgtgctagt
gaattctcttctttcagaacgcgtgtgctcagctgatagcacagtttgga
gaggagatgtgtgtggggaggtgctaccttgatatgggcagggcttgggg
tactctatctgctcccatttcctgttctctctactgcttgactcagctgg
atgtaagccagctctcatgcctacaaagtacagatgctctcccaccttcc
cgaggatgagcaacaacacccttaattaatgagtttatctcatcccctcc
ttcccgaagttgcttcttgtcagctgtttggtcacagcactgagtaaagt
aacaaaaatgacaggttttattatttttccaagaagtgatttcttctgat
agttttagtatttccttttggttccagttaatgatgggcacaatgaacac
tggacaacatgaagagtcatcatctccatgccaagatatctggatggtga
acttgaagcagctgaggtgaacaagaacagttcgtgtgttccttttaagg
agaaggtattaacaggaaagtgtcaatattttaggagactcaaagatcca
tatttataactttttatctggccataaaagtgagatgacatgctgaagtt
cgaaagaaagagagtccagagatccctgcatttgtcctacccaacagtga
gcagagggaggggagggagggaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_10348721_10349708
seq2: B6Ng01-055B02.b_48_1030

seq1  GAATTCCAGTGGCTCAGGATGACTCTTGTGGGCTTCAGTTGGGATAGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTGGCTCAGGATGACTCTTGTGGGCTTCAGTTGGGATAGAAA  50

seq1  GTACAGAGGAGTTGGGGAAAGTGGGAATGTTTGATCTCTGTGTGGCTGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAGAGGAGTTGGGGAAAGTGGGAATGTTTGATCTCTGTGTGGCTGGA  100

seq1  ATGAAACCAGAGCGGTCATGGAGTGAAGGCATGGAATAGTTCACGAAGCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACCAGAGCGGTCATGGAGTGAAGGCATGGAATAGTTCACGAAGCA  150

seq1  GGCACACTCAAGTCTGAATCAAATGCCATAGGCACCCAAATGACGCTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACACTCAAGTCTGAATCAAATGCCATAGGCACCCAAATGACGCTAAA  200

seq1  GTGCAGATACAGCATTCAATCCAGGGGTGGCAGCCTCTTGTCTGAAGACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCAGATACAGCATTCAATCCAGGGGTGGCAGCCTCTTGTCTGAAGACA  250

seq1  AAGAGTGGAGTGCAAGACTATGACTTACAAGGTTGGTGAACCGAATACTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTGGAGTGCAAGACTATGACTTACAAGGTTGGTGAACCGAATACTT  300

seq1  CAGTGTGTGAAAACAAGAGTCGTTGGTGGCTTTTTCATGGGAGTGTGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTGTGAAAACAAGAGTCGTTGGTGGCTTTTTCATGGGAGTGTGATG  350

seq1  GGATTTAGTTACTGTCTAATGACACTGGAGGGAGAGTGTTCACAATTAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTAGTTACTGTCTAATGACACTGGAGGGAGAGTGTTCACAATTAGT  400

seq1  GTTGGGATTAGAAGTGAGACCATGAAAGTGGAGGCCTGAGTCCTGTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGATTAGAAGTGAGACCATGAAAGTGGAGGCCTGAGTCCTGTTTAT  450

seq1  TTTCACACAGTATGCATGCCCGCACAACTTCTGGGTGAGCTAGAAGAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACACAGTATGCATGCCCGCACAACTTCTGGGTGAGCTAGAAGAAAT  500

seq1  GGAAAACATTGAAACCCCGCTGTCTAGCTCTGAGTCAGGGACTGTAAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAACATTGAAACCCCGCTGTCTAGCTCTGAGTCAGGGACTGTAAGCT  550

seq1  TATTTTATTTTTACTGTTTCTGGTGGTTTGTTTGATGGCTTAAAAAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTATTTTTACTGTTTCTGGTGGTTTGTTTGATGGCTTAAAAAATTT  600

seq1  CCATAAAAACCATTATTTTCTTTTAAAAAGTATTTATTGTTACCTAAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAAAAACCATTATTTTCTTTTAAAAAGTATTTATTGTTACCTAAATG  650

seq1  AGGAGTCTAGAAGAGGGCAGCAGATCCCTGGAGCTG-AAATCGCAGGTGG  699
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  AGGAGTCTAGAAGAGGGCAGCAGATCCCTGGAGCTGAAAATCGCAGGTGG  700

seq1  TTGTCACTCGCCCTGAGGGGCTGCTGGGGACCAATCTCTGCAACTCTGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACTCGCCCTGAGGGGCTGCTGGGGACCAATCTCTGCAACTCTGTA  750

seq1  ACTGCAGCAGCTA-TTACATCTTGACTAAGACAAGAGACAAGATGGCTGA  798
      ||||||||||||| ||||||||||||||| ||||||||||||||||||||
seq2  ACTGCAGCAGCTATTTACATCTTGACTAA-ACAAGAGACAAGATGGCTGA  799

seq1  GACATCTCGACAAGCCCTAAAATCAACTTTTCAAAGTGTTCCATTTTCTA  848
      |||||||||||||| ||| ||||||||||||| |||||||||||||||||
seq2  GACATCTCGACAAG-CCTTAAATCAACTTTTC-AAGTGTTCCATTTTCTA  847

seq1  AATTTTCTTCAACGTGCTTGGTATCATAACCTGGACGGTTCTAGGCCACG  898
      |||||||||| ||||||||||||||||||||  ||| |||||||||||| 
seq2  AATTTTCTTC-ACGTGCTTGGTATCATAACCCTGACTGTTCTAGGCCACA  896

seq1  AAGACATGAATCCTTTTGAAAATTCAGTGGAGTTTCATCCAGGAACCTTT  948
      |||||||||||||||||| |||||||||||||||||||||||||| ||||
seq2  AAGACATGAATCCTTTTG-AAATTCAGTGGAGTTTCATCCAGGAA-CTTT  944

seq1  CTCATCTTTCCATTGTGACTTTGATGACGTCCGTGCTAGT  988
      ||||||||||||||||||| ||||||||||||||||||||
seq2  CTCATCTTTCCATTGTGAC-TTGATGACGTCCGTGCTAGT  983

seq1: chr8_10483443_10484046
seq2: B6Ng01-055B02.g_164_740 (reverse)

seq1  CCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCCCTCT  50
                              |||||||||||||   ||||||||||
seq2  ------------------------CCCTCCCTCCCTC---CCCTCCCTCT  23

seq1  GCTCACTGTTGGGTAGGACAAATGCAGGGATCTCTGGACTCTCTTTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACTGTTGGGTAGGACAAATGCAGGGATCTCTGGACTCTCTTTCTTT  73

seq1  CGAACTTCAGCATGTCATCTCACTTTTATGGCCAGATAAAAAGTTATAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACTTCAGCATGTCATCTCACTTTTATGGCCAGATAAAAAGTTATAAA  123

seq1  TATGGATCTTTGAGTCTCCTAAAATATTGACACTTTCCTGTTAATACCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGATCTTTGAGTCTCCTAAAATATTGACACTTTCCTGTTAATACCTT  173

seq1  CTCCTTAAAAGGAACACACGAACTGTTCTTGTTCACCTCAGCTGCTTCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTAAAAGGAACACACGAACTGTTCTTGTTCACCTCAGCTGCTTCAA  223

seq1  GTTCACCATCCAGATATCTTGGCATGGAGATGATGACTCTTCATGTTGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACCATCCAGATATCTTGGCATGGAGATGATGACTCTTCATGTTGTC  273

seq1  CAGTGTTCATTGTGCCCATCATTAACTGGAACCAAAAGGAAATACTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTTCATTGTGCCCATCATTAACTGGAACCAAAAGGAAATACTAAAA  323

seq1  CTATCAGAAGAAATCACTTCTTGGAAAAATAATAAAACCTGTCATTTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCAGAAGAAATCACTTCTTGGAAAAATAATAAAACCTGTCATTTTTG  373

seq1  TTACTTTACTCAGTGCTGTGACCAAACAGCTGACAAGAAGCAACTTCGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTTACTCAGTGCTGTGACCAAACAGCTGACAAGAAGCAACTTCGGG  423

seq1  AAGGAGGGGATGAGATAAACTCATTAATTAAGGGTGTTGTTGCTCATCCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGGGGATGAGATAAACTCATTAATTAAGGGTGTTGTTGCTCATCCT  473

seq1  CGGGAAGGTGGGAGAGCATCTGTACTTTGTAGGCATGAGAGCTGGCTTAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAAGGTGGGAGAGCATCTGTACTTTGTAGGCATGAGAGCTGGCTTAC  523

seq1  ATCCAGCTGAGTCAAGCAGTAGAGAGAACAGGAAATGGGAGCAGATAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGCTGAGTCAAGCAGTAGAGAGAACAGGAAATGGGAGCAGATAGAG  573

seq1  TACC  604
      ||||
seq2  TACC  577