BAC Information

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BAC

Clone NameB6Ng01-057L16
Chromosome8 (Build37)
Map Location 55,028,436 - 55,029,368
singlet/doubletsinglet
Overlap genenone
Upstream geneAga, Neil3, LOC100040107
Downstream geneVegfc, Spcs3, Asb5, Spata4, Wdr17
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057L16.bB6Ng01-057L16.g
ACCDH879512DH879513
length1,0591,187
definitionDH879512|Mus musculus domesticus DNA, BAC clone: B6Ng01-057L16, 5' end.DH879513|Mus musculus domesticus DNA, BAC clone: B6Ng01-057L16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaactggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagatgccccaacaggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtattcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgcttttctccatatatatcat
tgtgatttgctcaataggaccacacctcataaccctcaaggtctttcatc
cccctcccagtagtctgcttccattttgatctcgcttccacatgagagaa
agctctcaatatttctctttcatacttcttctcacaaactcctctatctt
ctttctcctttagattccaaactcctatataatccttcttttactttcat
atcatatggatatatatgacatggatatatggatatatggtggatatatt
gcatctatattttgaccatatattcaaatattaattttctatatgaaaga
aaacaatgatactttttttgtgtggggagtctgcttattttgtttaagtg
taatctccaaatccagtcattgtctgcaatgacatatttatcttcttaag
ctgagtaaa
gaattctcacctgaggaatactgaatgcctgagaagcacctgaaaaaatg
ttcagcatccttaatcatcagggaaatgcagatcaaaacaaccctgagat
tccatctcacaccagtcagaatggataaattaaaaaattcaggtaacagc
agatgctggcgaggatgtggagaaagaggaatactcctccactgttgttg
ggattgcaagcttgtacaaccactctggaaatcaatctggaggttcctca
gaaaattggacatagtactaccagaggatcccgcaatacctctcctgggc
atatatccagaagatgttccaactggtaagaaagacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtaaatgtggtacatt
tacacaatggtgtactactcagctattaaaaagaatgaatttatgaaatt
aattcctaggcaaatggttggacctggagggcatcatcctgagtgaggta
acctaatcacaaaagaattcacatgatatgtacttactgataagtggata
ttagcccagaaacttagaatacccaagatataagatacaatttgtgaaac
acatgaaactgaagaagaacgaagaccaaagtgtggacactttgcccctt
cttagaattgggaacaaaacacccatggaaggagttacagagacaaagtt
tggagctgagacaaaaggatagaccatctagagactgctatatccaggga
tccatcccataatcagcctccaatgctgacaccactgcatacactagcaa
gattttgctgaaaggaccctgatatagctgtctcttgtgagtctatgcta
aggcctagcaaacacagaagtggatgctcacagccagcttattgaatgga
ttacagggtcttccaatggaggagctagagaaggtactccaagagctaag
ggatctgcaccctaaagtagaacaacaatatggactaccagtcctgtagc
cttttgtctctagctgcatattgtatcaaagatgactagtcagccatcca
ctggaataaagcccatttgtcatgcaactttattgccccagtccagtgaa
cacccagtcaaaagtgtgcatgggttgtgtagggatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_55028436_55029368
seq2: B6Ng01-057L16.b_183_1107

seq1  AAATTCAGGTGACAGCAGATGCTGGTGAGGATGTGGAGAAAGAGGAACAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCAGGTGACAGCAGATGCTGGTGAGGATGTGGAGAAAGAGGAACAC  50

seq1  TCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAAATCA  100

seq1  GTCTGGCGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATCCAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGCGGTTCCTCAGAAAACTGGACATAGTACTACCGGAGGATCCAGC  150

seq1  AATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACAGGTAAGAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACAGGTAAGAAGG  200

seq1  ACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGC  250

seq1  TGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGTG  300

seq1  GTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTA  350

seq1  TGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAGTGAG  400

seq1  GTAACACATTCACAAAGAAACTCACACAATATGTATTCACTGATAAGTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACACATTCACAAAGAAACTCACACAATATGTATTCACTGATAAGTGG  450

seq1  ATATTAGCCCCAAACCTAGGATACCCAAGATATAAGATATAATTTGCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTAGCCCCAAACCTAGGATACCCAAGATATAAGATATAATTTGCTTT  500

seq1  TCTCCATATATATCATTGTGATTTGCTCAATAGGACCACACCTCATAACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCATATATATCATTGTGATTTGCTCAATAGGACCACACCTCATAACC  550

seq1  CTCAAGGTCTTTCATCCCCCTCCCAGTAGTCTGCTTCCATTTTGATCTCG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAAGGTCTTTCATCCCCCTCCCAGTAGTCTGCTTCCATTTTGATCTCG  600

seq1  CTTCCACATGAGAGAAAGCTCTCAATATTTCTCTTTCATACTTCTTCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCACATGAGAGAAAGCTCTCAATATTTCTCTTTCATACTTCTTCTCA  650

seq1  CAAACTCCTCTATCTTCTTTCTCCTTTAGATTCCAAACTCCTATATAATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACTCCTCTATCTTCTTTCTCCTTTAGATTCCAAACTCCTATATAATC  700

seq1  CTTCTTTTACTTTCATATCATATGGATATATATGACATGGATATATGGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTTACTTTCATATCATATGGATATATATGACATGGATATATGGAT  750

seq1  ATAT-GTGGATATATTGCATCTATATTTTGACCATATATTCAAATATAAA  799
      |||| |||||||||||||||||||||||||||||||||||||||||| ||
seq2  ATATGGTGGATATATTGCATCTATATTTTGACCATATATTCAAATATTAA  800

seq1  TTTTCTATATGAAAGAAAACAGTGATACTTTTTTTGTGT-GTGAGTCTGC  848
      ||||||||||||||||||||| ||||||||||||||||| | ||||||||
seq2  TTTTCTATATGAAAGAAAACAATGATACTTTTTTTGTGTGGGGAGTCTGC  850

seq1  TTAATTTTGTTTAAAAGTGTAATCTCCAAATCCAGTCATTGTCCTGCAAA  898
      || |||||||||  |||||||||||||||||||||||||||| |||| ||
seq2  TT-ATTTTGTTT--AAGTGTAATCTCCAAATCCAGTCATTGT-CTGC-AA  895

seq1  TGACATAATTTAATTCTTCTTTATAGCTGAGTAAA  933
      |||||| |||||  |||||||   |||||||||||
seq2  TGACAT-ATTTA--TCTTCTT--AAGCTGAGTAAA  925