BAC Information

Click to search

BAC

Clone NameB6Ng01-060C19
Chromosome8 (Build37)
Map Location 62,223,754 - 62,224,861
singlet/doubletsinglet
Overlap genenone
Upstream gene4930431L04Rik, BC030500, LOC665116, LOC436042
Downstream geneAadat, Mfap3l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060C19.bB6Ng01-060C19.g
ACCDH881229DH881230
length1,2831,094
definitionDH881229|Mus musculus domesticus DNA, BAC clone: B6Ng01-060C19, 5' end.DH881230|Mus musculus domesticus DNA, BAC clone: B6Ng01-060C19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaccagactttaaaagaacagttaatgtcaatactatttcaatt
attctgcagaaatgaaacagaagaatcaatgcccaatttgttttacaagg
tcatagttaatctaataaacaaaccacataagacaacaaagagagctaga
gatatattctcccttgtgaatatacatacaaaattctatagaaagttttt
ttgtgatcttgtatcccaggtctctcagagaccattccgtgcagaagaga
gtgcaggccacagaagcaacagagcttcttggaaagggtcccttctcacc
ttcatcctcagccaagaagcagaactgagacccagtcctctgggcacctt
cctgccagaggagagttggcctccagggagagctctgacatgggaactca
ggtgagattgccatcttgtatctcgggtctctcagagtcctgtctgcaca
ggagagaacacaggctgcaggagcaacagagctccttggacagggtcctt
tcaggccttcatcttcagccaggaggcagagttgagctccagaccactgt
gcaccttccctgccagagcttgcctgcagagagtgctctgaccactggga
ctcaggagagagttggactcccaggaatgctaacagaggctaacagaatc
acatgaggaataagctccagccagagacagctagaacatctaacaccaga
gattatcagattgtaaaaagcaaacataagaatcttactaaaagaaacca
agaccactcggcatcattggaacccagtactcccaccacagtgagtcctg
gataccccaacacaactgaaaagcaagattaagatttaaaatcatatctt
atgatgctgatagagtatcttaagaagggcattaataactcacttaaaga
aatgaagagaacactgctaaataggtagaagtccttaaagaggatacaca
aaatccctcaagaatacatgagaacactaccaaacaggtgattgaatgaa
aaaaccacccaagatctaaaaatggaagtagaaactaaagaataccaaag
ggagacagtctggaatataatactagaaggaaccaggatcaaagatgtga
gcctcacaccggataaaagaaatagagaaggatctcagtgcgaaaaatcc
tagaaaacagcgtcacgtcaggaaatccaattccaagatctatcaatcga
ttacggatcaccgagacactaggataggtataagacagatgggtttcctt
agcacgctagtgcaagtatgagaggagttccta
gaattcaggccatgtttagatataattccaggaatgactaacagttaatt
tacataattatatacataattaagaatattgtggtttaaaataaacattt
gaaatgaaagtgatgtttgccatttatgtggatgagtcaaatggttaagt
tttaaatttttattgaataatttgttttttattctatttgatttgttttt
ttaaatgagcgcatgtaattattttgatgagtgagtagttatagtccaca
gtttattacagttggagagagtccaacttttgttttatatactgtattag
gagtatttttttattgagtgtagattgatcaagatcaatatactattaca
gcactacgtaactaccttcattcatagttttacatattaaatattaatgg
aacacttacaatttcttttttctaatttgatcttgaggtttgtatcctaa
gcatagccataaaattcagtgttttttttttcctacccaggaataatgtg
cttttaacaagatatagctttatcctaagcaccaaatttatgactgtaca
gactgtttactggaaattagcttatttttagggacatcatatgactgttt
tttgactggaatcctgtttcctgtgctatgatgctttctataagaatttt
aactaagaatacaacttaggtttaaggatgggcttcatgatgaagcacag
agcacatgactaacaacagtagtacaagtctggtaaagaagaggttcact
gagaaagataattatgttttgctatttcaaaattggtattttaaatttat
tcttgaaatttgaacacctgtataaaaattaaatatattcatatttatcc
tcatcacttcctgtctacatccttccagattctcccaacacatcatgctc
ccacttcatacacttaaaaaataaaacccactgaagttcattagtgctgc
taaatccgtatggatgtggagccatccactgtagcaagtagactaataat
agtcacacttctagagatatcatgccctgtagttattctggcatcatgta
aggggatcctgaactagccaaccacactagacaatatacggcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_62223754_62224861
seq2: B6Ng01-060C19.g_68_1161

seq1  GAATTCAGGCCATGTTTAGATATAATTCCAGGAATGACTAACAGTTAATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCCATGTTTAGATATAATTCCAGGAATGACTAACAGTTAATT  50

seq1  TACATAATTATATACATAATTAAGAATATTGTGGTTTAAAATAAACATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAATTATATACATAATTAAGAATATTGTGGTTTAAAATAAACATTT  100

seq1  GAAATGAAAGTGATGTTTGCCATTTATGTGGATGAGTCAAATGGTTAAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGAAAGTGATGTTTGCCATTTATGTGGATGAGTCAAATGGTTAAGT  150

seq1  TTTAAATTTTTATTGAATAATTTGTTTTTTATTCTATTTGATTTGTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTTTTATTGAATAATTTGTTTTTTATTCTATTTGATTTGTTTTT  200

seq1  TTAAATGAGCGCATGTAATTATTTTGATGAGTGAGTAGTTATAGTCCACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATGAGCGCATGTAATTATTTTGATGAGTGAGTAGTTATAGTCCACA  250

seq1  GTTTATTACAGTTGGAGAGAGTCCAACTTTTGTTTTATATACTGTATTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTACAGTTGGAGAGAGTCCAACTTTTGTTTTATATACTGTATTAG  300

seq1  GAGTATTTTTTTATTGAGTGTAGATTGATCAAGATCAATATACTATTACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTATTTTTTTATTGAGTGTAGATTGATCAAGATCAATATACTATTACA  350

seq1  GCACTACGTAACTACCTTCATTCATAGTTTTACATATTAAATATTAATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTACGTAACTACCTTCATTCATAGTTTTACATATTAAATATTAATGG  400

seq1  AACACTTACAATTTCTTTTTTCTAATTTGATCTTGAGGTTTGTATCCTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACACTTACAATTTCTTTTTTCTAATTTGATCTTGAGGTTTGTATCCTAA  450

seq1  GCATAGCCATAAAATTCAGTGTTTTTTTTTTCCTACCCAGGAATAATGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAGCCATAAAATTCAGTGTTTTTTTTTTCCTACCCAGGAATAATGTG  500

seq1  CTTTTAACAAGATATAGCTTTATCCTAAGCACCAAATTTATGACTGTACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAACAAGATATAGCTTTATCCTAAGCACCAAATTTATGACTGTACA  550

seq1  GACTGTTTACTGGAAATTAGCTTATTTTTAGGGACATCATATGACTGTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTTTACTGGAAATTAGCTTATTTTTAGGGACATCATATGACTGTTT  600

seq1  TTTGACTGGAATCCTGTTTCCTGTGCTATGATGCTTTCTATAAGAATTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACTGGAATCCTGTTTCCTGTGCTATGATGCTTTCTATAAGAATTTT  650

seq1  AACTAAGAATACAACTTAGGTTTAAGGATGGGCTTCATGATGAAGCACAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGAATACAACTTAGGTTTAAGGATGGGCTTCATGATGAAGCACAG  700

seq1  AGCACATGACTAACAACAGTAGTACAAGTCTGGTAAAGAAGAGGTTCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACATGACTAACAACAGTAGTACAAGTCTGGTAAAGAAGAGGTTCACT  750

seq1  GAGAAAGATAATTATGTTTTGCTATTTCAAAAATTGGTATTTTAAATTTA  800
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  GAGAAAGATAATTATGTTTTGCTATTTC-AAAATTGGTATTTTAAATTTA  799

seq1  TTCTTGAAATTTGAACACCTGTATAAAAATTAAATATATTCATATTTATC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGAAATTTGAACACCTGTATAAAAATTAAATATATTCATATTTATC  849

seq1  CTCATCAC-TCCTGTCTACATCCTTCCAGATTCTCCCAACACATCATGCT  899
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  CTCATCACTTCCTGTCTACATCCTTCCAGATTCTCCCAACACATCATGCT  899

seq1  CCCAACTTCATACACTTAAAAAAATAAAACCCACTGAAGTTCAATTAGTG  949
      ||| ||||||||||||| |||||||||||||||||||||||| |||||||
seq2  CCC-ACTTCATACACTT-AAAAAATAAAACCCACTGAAGTTC-ATTAGTG  946

seq1  CTGCTAAAATCCGTATGGATGTGGAGCCATCCACTGTAGCAAAGTAGACC  999
      ||||| |||||||||||||||||||||||||||||||||| ||||||| |
seq2  CTGCT-AAATCCGTATGGATGTGGAGCCATCCACTGTAGC-AAGTAGA-C  993

seq1  TAATAATAGTCACACTTCTTAGAAGAATATCATGCCCTGTAGTTATCCTG  1049
      |||||||||||||||||| ||||   |||||||||||||||||||| |||
seq2  TAATAATAGTCACACTTC-TAGA--GATATCATGCCCTGTAGTTATTCTG  1040

seq1  GCATCATGTAAGGTGATCCCTGAACTAGCCAACCCAACACTAGACAATAT  1099
      ||||||||||||| ||| ||||||||||||||||  ||||||||||||||
seq2  GCATCATGTAAGGGGAT-CCTGAACTAGCCAACC--ACACTAGACAATAT  1087

seq1  TAACGGCTA  1108
        |||||||
seq2  --ACGGCTA  1094