BAC Information

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BAC

Clone NameB6Ng01-060I07
Chromosome8 (Build37)
Map Location 85,822,187 - 85,897,411
singlet/doubletdoublet
Overlap geneElmod2, 4933434I20Rik
Upstream geneIl15, EG666564, LOC675800, EG666289, Zfp330, Rnf150, LOC100039688, Tbc1d9, Ucp1
Downstream geneClgn, Scoc, LOC546077, LOC675854, Olfr370, Ndufb7, Gpsn2, Dnajb1, Gipc1, Ptger1, Pkn1, Ddx39, Cd97, EG384857, Lphn1, Asf1b, Prkaca, Samd1, 1700067K01Rik, 2210011C24Rik, 4432412L15Rik, Il27ra, Rln3, C330011M18Rik, Rfx1, BC057552, LOC100039920, Podnl1, Cc2d1a, 4930432K21Rik, Nanos3, Zswim4, D8Ertd738e, 2410018C20Rik, Ccdc130
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-060I07.bB6Ng01-060I07.g
ACCDH881471DH881472
length1,1001,069
definitionDH881471|Mus musculus domesticus DNA, BAC clone: B6Ng01-060I07, 5' end.DH881472|Mus musculus domesticus DNA, BAC clone: B6Ng01-060I07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,896,870 - 85,897,411)(85,822,187 - 85,823,278)
sequence
gaattcttataggattaaggaatcatctatttctctatacagcatcacta
caggacagcacatcttcattgttctagagagatctagctcaaaagggtgg
gctaacacctagtggttgttatatataataaaagaaaaggcatataaata
gcaggaatctttcccaaaatggatttctcctgggccttgcctattagagc
aaattggtcatagattttaatccaaggtggacccatctcaggaagatcac
ctgctaatttttttagaatctactctttggctcatgacaatacaggattt
aggtccattcctcttcctggtgcctcttcactctttgaaccatatatttt
gtatttttcctttctaagcttgctgtgcttgattaaaacgctcttcatga
gagcaaaccagaggacaaagtctatgctgggcttttttgagacctccttt
gtcaattcaattaatataaatctctttatcttagcctcagtcagactctc
aagacaaggcctgaaagcaggaacattcttcaccaaaacataagaacagt
ctccagagttcaaatcactctcatcaccaatgtcatccatattcctacta
gaatggcccattcagtcccacttaaagcattttatggctttccaaatcct
aagtccccaaaaatccacaaaaatatggtcaggcctattatggcaatact
ctagtccctggtacctactttttttcttatttagggttttactgctgtga
atagacaccgtgaccaaagtaactcttataaaggacagcatttaattggg
gctggcttacaagttcagaggttcagtccattatcatcaaggtaggaaca
tgacagcatccaggcagacatggtgctggaggagccaagagttcttcttg
acccaaagacatacaggagaagactggctttctcgcagttaaggaagagt
atcttaaagccacccccacagtggtaaacttcctccatcagtcacaccta
ctcaacaaggcacaccttcaaatgctgccactcctctgaccaacacattc
aaactacattgccaggcaaatatgtaacatagtgttggtggggggggggg

gaattctgattacagctcaaactagtgggaaggaaaaattagtccaaaac
cctttacatcgataaacactttaaaaaagaaagctatcaaaaaaatattg
ccatttcatcttatttattgaccacagttcacagctaatatactcaataa
agtattgctaattccatctaaagcttgtcttttcgaggagtctatgtctc
catttaagagttggggctcagctagaatacagaattgtccccacagcaag
ggaagttctttgaaatcaaaagttcaaactaactcagttcatacaggtgt
ctggaggccatcttaccgcatccataacaatttataactggagacacaat
attcatttggttactaatattatcactggtgaatcttgactctgtctttc
tcacaattggaagatgagcagcagcagcagagtgagattttggttgtttg
gtttggtttcccactcttacaaactgaaagcagagcagcagacagaggac
ctgaagcagacaggtaccctgttcctggcttagtcacctcaggatgtgtt
ggctttggcaagttccctcctgggcctcatactgctgtggtgttgctgtg
aacctttggctctaccaacatagaaatcaggtaaacaggagctattcttc
atatgctggtctttggtggcttctctatccatccatgtatgacaacagct
gcagcagaggtggaagcagaaatgggtggtcctagtgcaggtagatgtac
aggatacttaattcaacgcttccactctcttctgcagctctgggctgtga
gaggtgttgtggctttcagatgcactgaggcatcagagcacctcagctct
tgatggcagacagtattgcaatttcttgtgtagttataggaagatgagat
ttctatgtctaacttaaccttggtcagtgtcacggctactggttaggctg
ttgagactctgggttgatctgcaactacagagctggagaagacagactct
gagaagaactaggactaaaggtcagggaggatggggagagaccttgcctc
ccaattcacctatgctctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_85896870_85897411
seq2: B6Ng01-060I07.b_609_1145 (reverse)

seq1  CACCCCCCCCCACACACCCTATGTTACATATTTTGCCTGGCATGTTGGTT  50
      | |||||||||||  || |||||||||||| |||||||||||   | |||
seq2  CCCCCCCCCCCACCAACACTATGTTACATA-TTTGCCTGGCAATGTAGTT  49

seq1  TGAATGTGTTTGGTCCAGA-GAGTGGCAGCATTTGGAGGTGTGGCCTTGT  99
      |||||||| ||||| |||| ||||||||||||||| |||||| |||||||
seq2  TGAATGTG-TTGGT-CAGAGGAGTGGCAGCATTTGAAGGTGT-GCCTTGT  96

seq1  TGGAGTAGGTGTGGCCTTGATGGAGGAAGTTTACCACTGTGGGGGTGGCT  149
      | ||||||||||| |  |||||||||||||||||||||||||||||||||
seq2  T-GAGTAGGTGTGAC--TGATGGAGGAAGTTTACCACTGTGGGGGTGGCT  143

seq1  TTAAGATACTCTTCC-TAACTGCGTGGAAGCCAGTCTTCTCCTGTATGTC  198
      ||||||||||||||| |||||||| | |||||||||||||||||||||||
seq2  TTAAGATACTCTTCCTTAACTGCGAGAAAGCCAGTCTTCTCCTGTATGTC  193

seq1  TTTGGGTCAAGAAGAACTCTTGGCTCCTCCAGCACCATGTCTGCCTGGAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTCAAGAAGAACTCTTGGCTCCTCCAGCACCATGTCTGCCTGGAT  243

seq1  GCTGTCATGTTCCTACCTTGATGATAATGGACTGAACCTCTGAACTTGTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTCATGTTCCTACCTTGATGATAATGGACTGAACCTCTGAACTTGTA  293

seq1  AGCCAGCCCCAATTAAATGCTGTCCTTTATAAGAGTTACCTTGGTCACGG  348
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGCCAGCCCCAATTAAATGCTGTCCTTTATAAGAGTTACTTTGGTCACGG  343

seq1  TGTCTATTCACAGCAGTAAAACCCTAAATAAGAAAAAAAGTAGGTACCAG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATTCACAGCAGTAAAACCCTAAATAAGAAAAAAAGTAGGTACCAG  393

seq1  GGACTAGAGTATTGCCATAATAGGCCTGACCATATTTTTGTGGATTTTTG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTAGAGTATTGCCATAATAGGCCTGACCATATTTTTGTGGATTTTTG  443

seq1  GGGACTTAGGATTTGGAAAGCCATAAAATGCTTTAAGTGGGACTGAATGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGACTTAGGATTTGGAAAGCCATAAAATGCTTTAAGTGGGACTGAATGG  493

seq1  GCCATTCTAGTAGGAATATGGATGACATTGGTGATGAGAGTGAT  542
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATTCTAGTAGGAATATGGATGACATTGGTGATGAGAGTGAT  537

seq1: chr8_85822187_85823278
seq2: B6Ng01-060I07.g_68_1136

seq1  GAATTCTGATTACAGCTCAAACTAGTGGGAAGGAAAAATTAGTCCAAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGATTACAGCTCAAACTAGTGGGAAGGAAAAATTAGTCCAAAAC  50

seq1  CCTTTACATCGATAAACACTTTAAAAAAGAAAGCTATCAAAAAAATATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTACATCGATAAACACTTTAAAAAAGAAAGCTATCAAAAAAATATTG  100

seq1  CCATTTCATCTTATTTATTGACCACAGTTCACAGCTAATATACTCAATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTTCATCTTATTTATTGACCACAGTTCACAGCTAATATACTCAATAA  150

seq1  AGTATTGCTAATTCCATCTAAAGCTTGTCTTTTCGAGGAGTCTATGTCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTGCTAATTCCATCTAAAGCTTGTCTTTTCGAGGAGTCTATGTCTC  200

seq1  CATTTAAGAGTTGGGGCTCAGCTAGAATACAGAATTGTCCCCACAGCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAGAGTTGGGGCTCAGCTAGAATACAGAATTGTCCCCACAGCAAG  250

seq1  GGAAGTTCTTTGAAATCAAAAGTTCAAACTAACTCAGTTCATACAGGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTTCTTTGAAATCAAAAGTTCAAACTAACTCAGTTCATACAGGTGT  300

seq1  CTGGAGGCCATCTTACCGCATCCATAACAATTTATAACTGGAGACACAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGGCCATCTTACCGCATCCATAACAATTTATAACTGGAGACACAAT  350

seq1  ATTCATTTGGTTACTAATATTATCACTGGTGAATCTTGACTCTGTCTTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATTTGGTTACTAATATTATCACTGGTGAATCTTGACTCTGTCTTTC  400

seq1  TCACAATTGGAAGATGAGCAGCAGCAGCAGAGTGAGATTTTGGTTGTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAATTGGAAGATGAGCAGCAGCAGCAGAGTGAGATTTTGGTTGTTTG  450

seq1  GTTTGGTTTCCCACTCTTACAAACTGAAAGCAGAGCAGCAGACAGAGGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTTTCCCACTCTTACAAACTGAAAGCAGAGCAGCAGACAGAGGAC  500

seq1  CTGAAGCAGACAGGTACCCTGTTCCTGGCTTAGTCACCTCAGGATGTGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGCAGACAGGTACCCTGTTCCTGGCTTAGTCACCTCAGGATGTGTT  550

seq1  GGCTTTGGCAAGTTCCCTCCTGGGCCTCATACTGCTGTGGTGTTGCTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTTGGCAAGTTCCCTCCTGGGCCTCATACTGCTGTGGTGTTGCTGTG  600

seq1  AACCTTTGGCTCTACCAACATAGAAATCAGGTAAACAGGAGCTATTCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTTTGGCTCTACCAACATAGAAATCAGGTAAACAGGAGCTATTCTTC  650

seq1  ATATGCTGGTCTTTGGTGGCTTCTCTATCCATCCATGTATGACAACAGCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCTGGTCTTTGGTGGCTTCTCTATCCATCCATGTATGACAACAGCT  700

seq1  GCAGCAGAGGTGGAAGCAGAAATGGGTGGTCCTAGTGCAGGTAGATGTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCAGAGGTGGAAGCAGAAATGGGTGGTCCTAGTGCAGGTAGATGTAC  750

seq1  AGGATACTTAATTCAACGCTTCCACTCTCTTCTGCAGCTCTGGGCTGTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATACTTAATTCAACGCTTCCACTCTCTTCTGCAGCTCTGGGCTGTGA  800

seq1  GAGGTGTTGTGGCTTTCAGATGCACTGAGGCATCAGAGCACCTCAGCCCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GAGGTGTTGTGGCTTTCAGATGCACTGAGGCATCAGAGCACCTCAGCTCT  850

seq1  TGATGGCAGACAGTATTGCAA-TTCTTGTGTAGTTATAGGAAGATGAGAT  899
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGATGGCAGACAGTATTGCAATTTCTTGTGTAGTTATAGGAAGATGAGAT  900

seq1  TTCTATGTCTAACTTAACCTTGGTCAGTGTCACGGCTACTGGTTAGGCTG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATGTCTAACTTAACCTTGGTCAGTGTCACGGCTACTGGTTAGGCTG  950

seq1  TTTGAGACTCCTGGGTTGATCTGCAAACTACAGAGCTGGAGAAAGACAAG  999
       |||||||| |||||||||||||| |||||||||||||||| ||||| ||
seq2  -TTGAGACT-CTGGGTTGATCTGC-AACTACAGAGCTGGAG-AAGAC-AG  995

seq1  ACCCTTGAGAGAAACTATGGGAACTAAAAAGGGGCCCAGGGGAAGAAGGG  1049
      || | |||||  |||||   | ||||||     |  |||||  || | ||
seq2  ACTC-TGAGAAGAACTA---GGACTAAA-----GGTCAGGG--AGGATGG  1034

seq1  GGAGGAAGGACCCATGCCCCGCCAGAGTTCCACCTATGCTCTG  1092
      ||||  |    || |||| | | |    | |||||||||||||
seq2  GGAGAGA----CCTTGCCTCCCAA----TTCACCTATGCTCTG  1069