BAC Information

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BAC

Clone NameB6Ng01-061G23
Chromosome8 (Build37)
Map Location 85,484,408 - 85,608,411
singlet/doubletdoublet
Overlap geneRnf150
Upstream geneInpp4b, LOC671182, Il15, EG666564, LOC675800, EG666289, Zfp330
Downstream geneLOC100039688, Tbc1d9, Ucp1, Elmod2, 4933434I20Rik, Clgn, Scoc, LOC546077, LOC675854, Olfr370, Ndufb7, Gpsn2, Dnajb1, Gipc1, Ptger1, Pkn1, Ddx39, Cd97, EG384857, Lphn1, Asf1b, Prkaca, Samd1, 1700067K01Rik, 2210011C24Rik, 4432412L15Rik, Il27ra, Rln3, C330011M18Rik, Rfx1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061G23.bB6Ng01-061G23.g
ACCDH882112DH882113
length1,0821,138
definitionDH882112|Mus musculus domesticus DNA, BAC clone: B6Ng01-061G23, 5' end.DH882113|Mus musculus domesticus DNA, BAC clone: B6Ng01-061G23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(85,484,408 - 85,485,494)(85,607,267 - 85,608,411)
sequence
gaattctacatagggccagatatagtggtccagatatagtggtccacatc
tttaatcccagtactcaggaggcagaggcaggtagatctctagttggagg
ccaacctggtctacagagtgagttcctggacagccagggctacacagaga
aaccctgtttcaaaaaaaaaaaaaaaaacttacagtggagatcgatcaag
aaagatatcagtgttgacctgtagccttcacacacaagtgtacatgacca
tgtgcatgcatgtatgtaccccataagctcacaccaacatacatacatac
atacatacatacatacatacacacacacatacacaccaggcatacaaaaa
aattctgtctacgcagagcatttaagtctcactgaagtaaaagggaaaga
agcttggatgcagccatgtggggtaatcacatttctcgggttttcctgcc
cttcagtaaccagattccaagtattcgcatgctacctaggctctagcctc
accttctgggccctctctcagcagccctcatttcagtacaggctgcttct
gcttgtcctccggtctctagggtccatgttttctgactctcctgcaggct
cttcctattggctcagcactggggatggaattctgagcactgcatcctca
cccaccttcagccccagccacacttgcctttcaagtattgtctttattca
ggcagctcagagttcacctcttatcttaggaacgattccacaggcccatc
ttttctacttgaattctcaatgccactttagaatcagcgtgactaaacta
tactatcttcctaaaatttagatttctcccatgatctttacctcagagaa
tggctttatgagaaatagccatcctgttcttgctcctgttcctctctcat
gccattcgttatccactgatttcttctcatctatctatttccatccaaca
cttgccaagcatgctatgttcttgttttttagccagggagtctttgacca
tgctgtttgtgaaacagaagttccttcactcacacaagctaagaaatgta
aagttttggccacgcaagatgtgacctgagtt
gaattcatttatgaaggtgataaactgctaaggctttggaggaaatcagg
gagtcaggcatcttcctgggaagacagggtatcaggttttgttttgtttg
tttgttttttaaactaggcttatagttccacatactctgaactttgtcat
ggtgtcctttggggaattctgagttttagactaaggccctccagtcagag
gacctgcattcctccctgacagttctctcctgctaagatggcccctgaca
gagcgtggcaagtggaagcctatgtagtggagtggaaaatagccagcaag
cagctcagcagatccagaacttagtgtggctgtctggcagctgggctcgc
caaggcccacctattggaggggtttagacacttggtaaaatctgcctttc
cactgtttcagggtgccgaggcaatcctcaaagtcatacacacgtcatat
tgataactcgcgactatgaatctcaagacgtggtataaaccaatcacagg
gccagcaaccagaacttctaagcagacctctgtacatgggctggagtgga
tcaaagggaaaacggagggaatcaatcgatgtaaactacacatcaacttt
aaaaagaagtcgccaagggaatgaaaccatttttcccaaacaagagcaag
aagatgggagaggctgaagtcaagtgaagaaactgtggagttctccttcc
agtctgctgcacgtctacacagacaccaagaaattcagctttcaacttcc
acatcaaggccacaggctgttgttgcagagatgggaacccgcatcctgac
tcgggagactttggatattgctttcgttaccacccttgaacagagtgccc
tggggttgccatggtgatctgaaggtcgtgtatccagttcagtccttgga
gcatgcttccctcctgtccccctgggttctatgtcttctctggtcaattc
accatctcaaggatttcaccttcctcgcagtcttggtcagtgaaagtcta
catctagacagggccacttccaggtgcataataatgaaaatgttagagtc
cttgctcatagctggctcttgacacctgaggggacaaaacaagtttaggt
ctacgcaacctaggtctttggatgcttctcttttggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_85484408_85485494
seq2: B6Ng01-061G23.b_49_1130

seq1  GAATTCTACATAGGGCCAGATATAGTGGTCCAGATATAGTGGTCCACATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTACATAGGGCCAGATATAGTGGTCCAGATATAGTGGTCCACATC  50

seq1  TTTAATCCCAGTACTCAGGAGGCAGAGGCAGGTAGATCTCTAGTTGGAGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCCCAGTACTCAGGAGGCAGAGGCAGGTAGATCTCTAGTTGGAGG  100

seq1  CCAACCTGGTCTACAGAGTGAGTTCCTGGACAGCCAGGGCTACACAGAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCTGGTCTACAGAGTGAGTTCCTGGACAGCCAGGGCTACACAGAGA  150

seq1  AACCCTGTTTCAAAAAAAAAAAAAAAAACTTACAGTGGAGATCGATCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTGTTTCAAAAAAAAAAAAAAAAACTTACAGTGGAGATCGATCAAG  200

seq1  AAAGATATCAGTGTTGACCTGTAGCCTTCACACACAAGTGTACATGACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATATCAGTGTTGACCTGTAGCCTTCACACACAAGTGTACATGACCA  250

seq1  TGTGCATGCATGTATGTACCCCATAAGCTCACACCAACATACATACATAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCATGCATGTATGTACCCCATAAGCTCACACCAACATACATACATAC  300

seq1  ATACATACATACATACATACACACACACATACACACCAGGCATACAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATACATACATACATACACACACACATACACACCAGGCATACAAAAA  350

seq1  AATTCTGTCTACGCAGAGCATTTAAGTCTCACTGAAGTAAAAGGGAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGTCTACGCAGAGCATTTAAGTCTCACTGAAGTAAAAGGGAAAGA  400

seq1  AGCTTGGATGCAGCCATGTGGGGTAATCACATTTCTCGGGTTTTCCTGCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTGGATGCAGCCATGTGGGGTAATCACATTTCTCGGGTTTTCCTGCC  450

seq1  CTTCAGTAACCAGATTCCAAGTATTCGCATGCTACCTAGGCTCTAGCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTAACCAGATTCCAAGTATTCGCATGCTACCTAGGCTCTAGCCTC  500

seq1  ACCTTCTGGGCCCTCTCTCAGCAGCCCTCATTTCAGTACAGGCTGCTTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTGGGCCCTCTCTCAGCAGCCCTCATTTCAGTACAGGCTGCTTCT  550

seq1  GCTTGTCCTCCGGTCTCTAGGGTCCATGTTTTCTGACTCTCCTGCAGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTCCTCCGGTCTCTAGGGTCCATGTTTTCTGACTCTCCTGCAGGCT  600

seq1  CTTCCTATTGGCTCAGCACTGGGGATGGAATTCTGAGCACTGCATCCTCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTATTGGCTCAGCACTGGGGATGGAATTCTGAGCACTGCATCCTCA  650

seq1  CCCACCTTCAGCCCCAGCCACACTTGCCTTTCAAGTATTGTCTTTATTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTTCAGCCCCAGCCACACTTGCCTTTCAAGTATTGTCTTTATTCA  700

seq1  GGCAGCTCAGAGTTCACCTCTTATCTTAGGAACGATTCCACAGGCCCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGCTCAGAGTTCACCTCTTATCTTAGGAACGATTCCACAGGCCCATC  750

seq1  TTTTCTACTTGAATTCTCAATGCCACTTTAGAATCAGCGTGACTAAACTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTACTTGAATTCTCAATGCCACTTTAGAATCAGCGTGACTAAACTA  800

seq1  TACTATCTTCCTAAAATTTAGATTTCTCCCATGATCTTTACCTCAGAGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTATCTTCCTAAAATTTAGATTTCTCCCATGATCTTTACCTCAGAGAA  850

seq1  TGGCTTTATGAGAAATAGCCATCCTGTTCTTGCTCCTGTTCCTCCCTCAT  900
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGGCTTTATGAGAAATAGCCATCCTGTTCTTGCTCCTGTTCCTCTCTCAT  900

seq1  GCCATTCGTTATCCACTGATTTCTTCTTCATCTATCTATTTCCATCCAAC  950
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GCCATTCGTTATCCACTGATTTCTTC-TCATCTATCTATTTCCATCCAAC  949

seq1  ACTTGCCAAGCATGCTATGTTCTTGTTTTTTAGCCAGGGAGCCTTTGACC  1000
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ACTTGCCAAGCATGCTATGTTCTTGTTTTTTAGCCAGGGAGTCTTTGACC  999

seq1  ATGCTGTTTGTTGAAACAGAAG-TCCCTCACTCACACAGGCTAAGGAGAT  1049
      |||||||||| ||||||||||| ||| ||||||||||| ||||| || ||
seq2  ATGCTGTTTG-TGAAACAGAAGTTCCTTCACTCACACAAGCTAA-GAAAT  1047

seq1  GGTAAAGTCTTTGCCACGCAAGAATGGTGACCTGAGTT  1087
       ||||||| || |||||||||||   ||||||||||||
seq2  -GTAAAGTTTTGGCCACGCAAGA--TGTGACCTGAGTT  1082

seq1: chr8_85607267_85608411
seq2: B6Ng01-061G23.g_69_1206 (reverse)

seq1  TTCCAAAACGGAAGCATCCAAAGACATAGCTTGACGTTGACCATAAACTT  50
      ||||||||  ||||||||||||||| ||| ||| ||| |||| ||||| |
seq2  TTCCAAAAGAGAAGCATCCAAAGACCTAGGTTG-CGTAGACC-TAAAC-T  47

seq1  TGCTTTGTCCCCCTTCAGGTGGTCAAGAGCCAGCACTGAGCAGTGACTCT  100
      || |||||||||  |||||| |||||||||||||  ||||||  ||||||
seq2  TGTTTTGTCCCC--TCAGGT-GTCAAGAGCCAGCTATGAGCAAGGACTCT  94

seq1  GACA-TCTCATTAATTATGGCACTGGAAGTGGGCCTGTCT-GATGTAGAA  148
       ||| | ||||| ||||||   |||||||||| ||||||| ||||||| |
seq2  AACATTTTCATT-ATTATGCACCTGGAAGTGGCCCTGTCTAGATGTAG-A  142

seq1  CTTTCCACTGACCAAGACTGCGAGG-AGGTGAAAT-CTTGAGATGGTAGA  196
      |||| |||||||||||||||||||| ||||||||| |||||||||||   
seq2  CTTT-CACTGACCAAGACTGCGAGGAAGGTGAAATCCTTGAGATGGT--G  189

seq1  AATGGACAAGAGAAGACATAGGAACCAGGGGGACAGGAGGGAAGCATGCT  246
      ||| ||| ||||||||||||| | ||||||||||||||||||||||||||
seq2  AATTGACCAGAGAAGACATAGAACCCAGGGGGACAGGAGGGAAGCATGCT  239

seq1  CCAAGGACTGAACTGGATACACGACCTTCAGATCACCATGGCAACCCCAG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGACTGAACTGGATACACGACCTTCAGATCACCATGGCAACCCCAG  289

seq1  GGCACTCTGTTCAAGGGTGGTAACGAAAGCAATATCCAAAGTCTCCCGAG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTCTGTTCAAGGGTGGTAACGAAAGCAATATCCAAAGTCTCCCGAG  339

seq1  TCAGGATGCGGGTTCCCATCTCTGCAACAACAGCCTGTGGCCTTGATGTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGATGCGGGTTCCCATCTCTGCAACAACAGCCTGTGGCCTTGATGTG  389

seq1  GAAGTTGAAAGCTGAATTTCTTGGTGTCTGTGTAGACGTGCAGCAGACTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTTGAAAGCTGAATTTCTTGGTGTCTGTGTAGACGTGCAGCAGACTG  439

seq1  GAAGGAGAACTCCACAGTTTCTTCACTTGACTTCAGCCTCTCCCATCTTC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGAGAACTCCACAGTTTCTTCACTTGACTTCAGCCTCTCCCATCTTC  489

seq1  TTGCTCTTGTTTGGGAAAAATGGTTTCATTCCCTTGGCGACTTCTTTTTA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTTGTTTGGGAAAAATGGTTTCATTCCCTTGGCGACTTCTTTTTA  539

seq1  AAGTTGATGTGTAGTTTACATCGATTGATTCCCTCCGTTTTCCCTTTGAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGATGTGTAGTTTACATCGATTGATTCCCTCCGTTTTCCCTTTGAT  589

seq1  CCACTCCAGCCCATGTACAGAGGTCTGCTTAGAAGTTCTGGTTGCTGGCC  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCCAGCCCATGTACAGAGGTCTGCTTAGAAGTTCTGGTTGCTGGCC  639

seq1  CTGTGATTGGTTTATACCACGTCTTGAGATTCATAGTCGCGAGTTATCAA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGATTGGTTTATACCACGTCTTGAGATTCATAGTCGCGAGTTATCAA  689

seq1  TATGACGTGTGTATGACTTTGAGGATTGCCTCGGCACCCTGAAACAGTGG  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACGTGTGTATGACTTTGAGGATTGCCTCGGCACCCTGAAACAGTGG  739

seq1  AAAGGCAGATTTTACCAAGTGTCTAAACCCCTCCAATAGGTGGGCCTTGG  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGCAGATTTTACCAAGTGTCTAAACCCCTCCAATAGGTGGGCCTTGG  789

seq1  CGAGCCCAGCTGCCAGACAGCCACACTAAGTTCTGGATCTGCTGAGCTGC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGCCCAGCTGCCAGACAGCCACACTAAGTTCTGGATCTGCTGAGCTGC  839

seq1  TTGCTGGCTATTTTCCACTCCACTACATAGGCTTCCACTTGCCACGCTCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTGGCTATTTTCCACTCCACTACATAGGCTTCCACTTGCCACGCTCT  889

seq1  GTCAGGGGCCATCTTAGCAGGAGAGAACTGTCAGGGAGGAATGCAGGTCC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGGGGCCATCTTAGCAGGAGAGAACTGTCAGGGAGGAATGCAGGTCC  939

seq1  TCTGACTGGAGGGCCTTAGTCTAAAACTCAGAATTCCCCAAAGGACACCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGACTGGAGGGCCTTAGTCTAAAACTCAGAATTCCCCAAAGGACACCA  989

seq1  TGACAAAGTTCAGAGTATGTGGAACTATAAGCCTAGTTTAAAAAACAAAC  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAGTTCAGAGTATGTGGAACTATAAGCCTAGTTTAAAAAACAAAC  1039

seq1  AAACAAAACAAAACCTGATACCCTGTCTTCCCAGGAAGATGCCTGACTCC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAACAAAACCTGATACCCTGTCTTCCCAGGAAGATGCCTGACTCC  1089

seq1  CTGATTTCCTCCAAAGCCTTAGCAGTTTATCACCTTCATAAATGAATTC  1145
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTTCCTCCAAAGCCTTAGCAGTTTATCACCTTCATAAATGAATTC  1138