BAC Information

Click to search

BAC

Clone NameB6Ng01-062K07
Chromosome8 (Build37)
Map Location 129,087,879 - 129,257,915
singlet/doubletdoublet
Overlap geneIrf2bp2
Upstream gene4933403G14Rik, 2310079N02Rik, E330039K12Rik, BC021891, Kcnk1, Slc35f3, LOC668434, 1810063B05Rik, EG619653
Downstream geneTomm20, Rbm34, LOC100043368, Gabarapl2-ps8_1688.1, Pard3, EG628847
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-062K07.bB6Ng01-062K07.g
ACCDH882977DH882978
length9811,095
definitionDH882977|Mus musculus domesticus DNA, BAC clone: B6Ng01-062K07, 5' end.DH882978|Mus musculus domesticus DNA, BAC clone: B6Ng01-062K07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,256,933 - 129,257,915)(129,087,879 - 129,089,013)
sequence
gaattcaaccccagaacctggcagagtgtgggcttcggtaactccagagc
aggaagagtggggaagggagggttccctagggcgtgctggtcaagcaccc
aggctggtcacaggtggtacctgcagatgacctgtggctccacacctgtg
cacatccactctgtgtgaatggaagcacacgcacatgattgctctggagg
gacagagctttgtttactttgagacatttacagatgcatctgaacattcc
aactgggtttttaatggtttagaaaccccagagctttaactcgagtcttc
ctgccagaatgcccatacagtcagttgcattgggttctgattcgggttct
gacattatccaggagacccaccttgacctaccctctccagaaatggccca
aacaggcctctgggggaactcccaggctctgcagggacttgttggggagt
aattacagtgggcagacccttctgcttacacgcttagtcataattactta
cccaagcggcaccaacagtgtgatgggagcttagctgaacagagagaagg
ctcagcaggcacatcaccttgagcttgacccgtcagccagatttcacggc
acctgctggtttagcctgagggctgtgattcattctcgggaaaggagctg
cagacatgctctcctccagaaccctgttctctctgctcgctcccctcttt
tgaaggaagaaatagaggcgtctgtgtgctccggctgcctctgagggggc
tgatccttttgatgtgcacacatatgcaaaaatataaaatatgtgttgta
atgcactggggtgttttgtttttgtttgtttgtttgtttgtttgtttgtg
ccttggacacagggtctaattaatgtcttcccttagcagaggtcttttcc
cagagaagggacctccttttctggaggatgattgcaaaaccatgattgac
agacatccctaactttgcttacagcctctat
gaattcttttttttctctctctgaaggcaggaaagataaatttcagcata
gtttaatttgtaagagaatatcccacccaatcttttgaggggcactgctt
ctggccccttcttttcagctctgtgcagttgcagatgaaagcaagcagcc
tgtgggtgcagccacagatagagcatcagacattgtcttatcaagcaggg
ggacgaagtgatgagaagattcccctgtcttttgaggctttcttaccaag
ggcacacccaggattctgtaggaaaagcatccatcataggttcccaagcc
cctggccagcagaataagatgaaagccgctccctcagtgcctagtgtctg
tagacagagcctatgaagagttctgctttgcctaaaggactgaagggtgt
taggggagtggaccagcctggcttcacaatctcttcaactgtgtcctttg
gcgtgtgtatgtgcacgcgtatcttgttatcagggactcacaatttgttt
gtttgtattgaggatttctgtatgggttctggggaatccagctcaaacat
gcttgggaggcaacattttactgaatgaacgattcctcaccacccaacct
acacaccacctcctgcctcgggtttggttaagcagtcaatgtggataaca
ggaaatgtccccacaggcacgcgtgtttgaatacttggtccccagctggt
agcactctcttgaggggttatagaacccttggggcaggtggcatggttgt
tggaagtctctggaggccagtctcggagcaggacagcctagctccacttc
caggtggagttttctgtgttcagcaagatgcgaacaagctgagcagatct
ttcctgcaacgcagacgttagcagccatgtcatccccactgagatgtttg
gtgttccaccaaacaatgtccctcctttggatgcttccctcagaatgtgt
cagaggactggagtgtaatgatgccctaggggagggtgctaaccaaggga
tcagtcaatcagcaagtctagtccaaagactaaggttcacggtcccagaa
acatggctctactgtacgcaggtcatctgcttatcagaatgcttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_129256933_129257915
seq2: B6Ng01-062K07.b_44_1024 (reverse)

seq1  ATAGAGGCTGTAAGCAAAGTTAGGGATGTCTGGTCACTCACTGTTTTGCA  50
      ||||||||||||||||||||||||||||||| |||| |||  ||||||||
seq2  ATAGAGGCTGTAAGCAAAGTTAGGGATGTCT-GTCAATCATGGTTTTGCA  49

seq1  ATCATCCTCCAGAAA--GGGGTCCCTTCTCTGGGAAAGGACCTCTGCTAA  98
      |||||||||||||||  | |||||||||||||||||| ||||||||||||
seq2  ATCATCCTCCAGAAAAGGAGGTCCCTTCTCTGGGAAAAGACCTCTGCTAA  99

seq1  GGGAAGACATTAATTTATGACCCTGTGTCCAAGGCACAAACAAACAAACA  148
      |||||||||||||||   ||||||||||||||||||||||||||||||||
seq2  GGGAAGACATTAATT--AGACCCTGTGTCCAAGGCACAAACAAACAAACA  147

seq1  AACAAAACAAAACAAAAACAAAACACCCCAGTGCATTACAACACATATTT  198
      ||||||   |||||||||||||||||||||||||||||||||||||||||
seq2  AACAAA--CAAACAAAAACAAAACACCCCAGTGCATTACAACACATATTT  195

seq1  TAATATTTTTGCATATGTGTGCACATC-AAAGGATCAG-CCCCTCAGAGG  246
      | ||||||||||||||||||||||||| |||||||||| |||||||||||
seq2  T-ATATTTTTGCATATGTGTGCACATCAAAAGGATCAGCCCCCTCAGAGG  244

seq1  CAGCCGGAGCACACAGACGCCTCTATTTCTTCCTTCAAAAGAGGGGAGCG  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCGGAGCACACAGACGCCTCTATTTCTTCCTTCAAAAGAGGGGAGCG  294

seq1  AGCAGAGAGAACAGGGTTCTGGAGGAGAGCATGTCTGCAGCTCCTTTCCC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGAGAGAACAGGGTTCTGGAGGAGAGCATGTCTGCAGCTCCTTTCCC  344

seq1  GAGAATGAATCACAGCCCTCAGGCTAAACCAGCAGGTGCCGTGAAATCTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGAATCACAGCCCTCAGGCTAAACCAGCAGGTGCCGTGAAATCTG  394

seq1  GCTGACGGGTCAAGCTCAAGGTGATGTGCCTGCTGAGCCTTCTCTCTGTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACGGGTCAAGCTCAAGGTGATGTGCCTGCTGAGCCTTCTCTCTGTT  444

seq1  CAGCTAAGCTCCCATCACACTGTTGGTGCCGCTTGGGTAAGTAATTATGA  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCTAAGCTCCCATCACACTGTTGGTGCCGCTTGGGTAAGTAATTATGA  494

seq1  CTAAGCGTGTAAGCAGAAGGGTCTGCCCACTGTAATTACTCCCCAACAAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGCGTGTAAGCAGAAGGGTCTGCCCACTGTAATTACTCCCCAACAAG  544

seq1  TCCCTGCAGAGCCTGGGAGTTCCCCCAGAGGCCTGTTTGGGCCATTTCTG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGCAGAGCCTGGGAGTTCCCCCAGAGGCCTGTTTGGGCCATTTCTG  594

seq1  GAGAGGGTAGGTCAAGGTGGGTCTCCTGGATAATGTCAGAACCCGAATCA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGTAGGTCAAGGTGGGTCTCCTGGATAATGTCAGAACCCGAATCA  644

seq1  GAACCCAATGCAACTGACTGTATGGGCATTCTGGCAGGAAGACTCGAGTT  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACCCAATGCAACTGACTGTATGGGCATTCTGGCAGGAAGACTCGAGTT  694

seq1  AAAGCTCTGGGGTTTCTAAACCATTAAAAACCCAGTTGGAATGTTCAGAT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCTCTGGGGTTTCTAAACCATTAAAAACCCAGTTGGAATGTTCAGAT  744

seq1  GCATCTGTAAATGTCTCAAAGTAAACAAAGCTCTGTCCCTCCAGAGCAAT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCTGTAAATGTCTCAAAGTAAACAAAGCTCTGTCCCTCCAGAGCAAT  794

seq1  CATGTGCGTGTGCTTCCATTCACACAGAGTGGATGTGCACAGGTGTGGAG  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGCGTGTGCTTCCATTCACACAGAGTGGATGTGCACAGGTGTGGAG  844

seq1  CCACAGGTCATCTGCAGGTACCACCTGTGACCAGCCTGGGTGCTTGACCA  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACAGGTCATCTGCAGGTACCACCTGTGACCAGCCTGGGTGCTTGACCA  894

seq1  GCACGCCCTAGGGAACCCTCCCTTCCCCACTCTTCCTGCTCTGGAGTTAC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACGCCCTAGGGAACCCTCCCTTCCCCACTCTTCCTGCTCTGGAGTTAC  944

seq1  CGAAGCCCACACTCTGCCAGGTTCTGGGGTTGAATTC  983
      |||||||||||||||||||||||||||||||||||||
seq2  CGAAGCCCACACTCTGCCAGGTTCTGGGGTTGAATTC  981

seq1: chr8_129087879_129089013
seq2: B6Ng01-062K07.g_70_1164

seq1  GAATTCTTTTTTTTCTCTCTCTGAAGGCAGGAAAGATAAATTTCAGCATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTTTTCTCTCTCTGAAGGCAGGAAAGATAAATTTCAGCATA  50

seq1  GTTTAATTTGTAAGAGAATATCCCACCCAATCTTTTGAGGGGCACTGCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATTTGTAAGAGAATATCCCACCCAATCTTTTGAGGGGCACTGCTT  100

seq1  CTGGCCCCTTCTTTTCAGCTCTGTGCAGTTGCAGATGAAAGCAAGCAGCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCCCTTCTTTTCAGCTCTGTGCAGTTGCAGATGAAAGCAAGCAGCC  150

seq1  TGTGGGTGCAGCCACAGATAGAGCATCAGACATTGTCTTATCAAGCAGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGTGCAGCCACAGATAGAGCATCAGACATTGTCTTATCAAGCAGGG  200

seq1  GGACGAAGTGATGAGAAGATTCCCCTGTCTTTTGAGGCTTTCTTACCAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACGAAGTGATGAGAAGATTCCCCTGTCTTTTGAGGCTTTCTTACCAAG  250

seq1  GGCACACCCAGGATTCTGTAGGAAAAGCATCCATCATAGGTTCCCAAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACACCCAGGATTCTGTAGGAAAAGCATCCATCATAGGTTCCCAAGCC  300

seq1  CCTGGCCAGCAGAATAAGATGAAAGCCGCTCCCTCAGTGCCTAGTGTCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCCAGCAGAATAAGATGAAAGCCGCTCCCTCAGTGCCTAGTGTCTG  350

seq1  TAGACAGAGCCTATGAAGAGTTCTGCTTTGCCTAAAGGACTGAAGGGTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGACAGAGCCTATGAAGAGTTCTGCTTTGCCTAAAGGACTGAAGGGTGT  400

seq1  TAGGGGAGTGGACCAGCCTGGCTTCACAATCTCTTCAACTGTGTCCTTTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGAGTGGACCAGCCTGGCTTCACAATCTCTTCAACTGTGTCCTTTG  450

seq1  GCGTGTGTATGTGCACGCGTATCTTGTTATCAGGGACTCACAATTTGTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTGTGTATGTGCACGCGTATCTTGTTATCAGGGACTCACAATTTGTTT  500

seq1  GTTTGTATTGAGGATTTCTGTATGGGTTCTGGGGAATCCAGCTCAAACAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTATTGAGGATTTCTGTATGGGTTCTGGGGAATCCAGCTCAAACAT  550

seq1  GCTTGGGAGGCAACATTTTACTGAATGAACGATTCCTCACCACCCAACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGGAGGCAACATTTTACTGAATGAACGATTCCTCACCACCCAACCT  600

seq1  ACACACCACCTCCTGCCTCGGGTTTGGTTAAGCAGTCAATGTGGATAACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACCACCTCCTGCCTCGGGTTTGGTTAAGCAGTCAATGTGGATAACA  650

seq1  GGAAATGTCCCCACAGGCACGCGTGTTTGAATACTTGGTCCCCAGCTGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGTCCCCACAGGCACGCGTGTTTGAATACTTGGTCCCCAGCTGGT  700

seq1  AGCACTCTCTTGAGGGGTTATAGAACCCTTGGGGCAGGTGGCATGGTTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACTCTCTTGAGGGGTTATAGAACCCTTGGGGCAGGTGGCATGGTTGT  750

seq1  TGGAAGTCTCTGGAGGCCAGTCTCGGAGCAGGACAGCCTAGCCCCACTTC  800
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TGGAAGTCTCTGGAGGCCAGTCTCGGAGCAGGACAGCCTAGCTCCACTTC  800

seq1  CAGGTGGAGTTTTCTGTGTTCAGCAAGATGCGAACAAGCTGAGCAGGATC  850
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CAGGTGGAGTTTTCTGTGTTCAGCAAGATGCGAACAAGCTGAGCA-GATC  849

seq1  -TTCCTGCAACGCAGACGTTAGCAGCCATGTCATCCCCACTGAGATGTTT  899
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGCAACGCAGACGTTAGCAGCCATGTCATCCCCACTGAGATGTTT  899

seq1  GGTGTTCCAACCAAAACAAATGTCCCTCCTTTGGGATGCTTCCCTCAGGA  949
      |||||||| ||||||   |||||||||||||| |||||||||||||| ||
seq2  GGTGTTCC-ACCAAA--CAATGTCCCTCCTTT-GGATGCTTCCCTCA-GA  944

seq1  ATGTTGTCAGTAGGGACTGGAAGTGTAAATGATGCCCTAGGGGGAGGGGT  999
      ||| ||||||   ||||||| ||||| ||||||||||||||||   ||||
seq2  ATG-TGTCAG--AGGACTGG-AGTGT-AATGATGCCCTAGGGG--AGGGT  987

seq1  GCTGAGCACAAAGGGATCAAGGTCAAATCAGGCACAGTCTAGGTCCTCAA  1049
      |||    || |||||||||  ||| ||||| ||| |||||| |||  |||
seq2  GCT---AACCAAGGGATCA--GTC-AATCA-GCA-AGTCTA-GTC--CAA  1026

seq1  GGACATAGGGTTCCACCGTTTCCCACAGAAACATTGGCCCTCTACAGTAG  1099
       ||| || |||| ||| ||    | ||||||||| |   |||||| ||| 
seq2  AGAC-TAAGGTT-CACGGT----CCCAGAAACATGG---CTCTACTGTA-  1066

seq1  CAGCAGGGTCCACTCCATGCTTATCAGAAATGCTTG  1135
        ||| ||||  |    |||||||||| ||||||||
seq2  -CGCA-GGTCATC----TGCTTATCAG-AATGCTTG  1095