BAC Information

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BAC

Clone NameB6Ng01-065G19
Chromosome8 (Build37)
Map Location 130,732,373 - 130,733,426
singlet/doubletsinglet
Overlap genenone
Upstream genePard3, EG628847
Downstream geneNrp1, LOC668494, Itgb1, LOC100042659, LOC100042667, Ccdc7, 1700008F21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-065G19.bB6Ng01-065G19.g
ACCDH884902DH884903
length1,1301,048
definitionDH884902|Mus musculus domesticus DNA, BAC clone: B6Ng01-065G19, 5' end.DH884903|Mus musculus domesticus DNA, BAC clone: B6Ng01-065G19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcagttcgccactatcttactaatcacttctaatttaagttcacca
gggatattgtctcctactatcttttctgatgctgtccttgtctgggtttg
ctctcagaacagacttggcttcagaaaatgcatttgtaaattcatttcca
ttcactttttgggagaattggaagaggttggtattaactctttttggtac
aattgcttggtggagccatctgctctgtggttttctttcttggaagaatt
ttgattagtgactcagccttcttactcatttttagtttgttcagattttc
tatttcttcatgtttagtcctagtatgtgtctgtaaatttagtcgttttt
ctccacactatcaaatctgttggcagatagttttcagtagcctacactgt
cttttgtgttcccgggttgtcagctgtaatggcttctcttcattcatcat
tttaatgcagttacattttcaatctaactaaggtctggtcagttttatct
gggttttcaaaagtcggctcttaattccttgatgttttgcattttctagt
ctttgtttctgctttgatctttctattgctaacttcaggctgcagggcct
ttcctacatccctgtgaagctgggttattgagatcttgcttttctcccag
tgtagcgatctctgctgagaccacgcctctcagaatggctacccatgtcc
ttgtgcatttccacttctgtttgttgcagtgtttttgtttgtttgccttc
ctttgattccttctttgaccagttggctgtgcacgaggtgtctggtattt
aatttttacatgctcatgtgtcctcctgttcattttctgttactcatttt
tagtttcatgccacgtgctcaaaatatacttggtgttatttcaattttct
gaactttcttaagacttgctttgatgaataatattatatgtatatatatt
tcacatgtcaggtgcacttgaagagaaggacctgcattgatggaaggtgt
tcttatttgtcttctcagcaatttgttcatgacttacctacccaccccta
agttattatcttctttctcgataactactgccacgcgtagggggaggagg
gaaagcacttcgagacgggttgttttacgt
gaattccagcattggggaaagaggcagagacaggaggattctttgttttg
ttagccaaccaggctagtctacttggcaatccccagcacagtgagagaat
ataactcaaaaaccaagacagacagcacctgaaaaattgcagctgagctt
gttctctgacctctacaggcacttgcattcaaatgcatagatgtgtgtac
acctgtgtattatagaaaaaaatgcacacatgtacccgtgcatgcacata
agcatacacacacacaaaggaatatttatacaggacatggtgatatgtac
ttgtaatctcagcatttgtgggtgaagaaggacaagaggaaaaaaagtaa
agcagcaatttttagctgataggttctgaaccttcgaccctgtagaaatg
gaaggcagaggattgactgcagttacttctaaaggagtttaagttccaga
aatgcttgagttttggttgcatccttacctgaaatgacacattcaggaag
aactaaaagatatttcctggaccacaactattctttcttggatagctata
atctccatttttactcccaattttaaactttcagacaaataagaagacat
actttaactcatggtccaaagctgaaaactatacatatgcagatttatgc
aaataccaatgcaaatcaggcagaaccactgggcttctgggaaattgcaa
atagagcctttgatacagcagaggtcaaatatccttggcttggagatcaa
ttctacatgcagattttgtaggacagttggcagcccctaagcacagcagt
cttcaaatactatgattattcaatgcttgaacagtttccagtcatattta
gaggagtggacctggttcagtgaaaatgacaaagagctgatgtacttagc
tcttatagcctgtgcatctgtttgattatctcacttcctcattcattcat
tcatcatcattcatctattatctacttttgagaccacactggtctctaag
gcttgttcaaactcattctgtggcttaagaatgactttgaccttctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_130732373_130733426
seq2: B6Ng01-065G19.g_69_1116 (reverse)

seq1  TCAGAAGTTCAAAGTCATCCTT-AGCCACAGAATGAGTTCTAGAAC-AGC  48
      ||||||| |||||||||| ||| |||||||||||||||  | |||| |||
seq2  TCAGAAGGTCAAAGTCATTCTTAAGCCACAGAATGAGT--TTGAACAAGC  48

seq1  CTATGAGACCATGTGT-GTCTCAAAAGTAGATAAATAGATGAATGAATGA  97
      ||  ||||||| |||| ||||||||||||||| |||||||||||| ||| 
seq2  CTTAGAGACCA-GTGTGGTCTCAAAAGTAGAT-AATAGATGAATG-ATG-  94

seq1  ATGAATGAATGAATGAGGAAAGTGAAGATAAATCAAACAGATGCACAGGG  147
      |||||||||||||||||| ||||| |||| ||||||||||||||||| ||
seq2  ATGAATGAATGAATGAGG-AAGTG-AGAT-AATCAAACAGATGCACA-GG  140

seq1  CTATAAGAGCTAAGTAACATCAGCTCTTTGTCATTTTCACTGAACCAGGT  197
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTATAAGAGCTAAGT-ACATCAGCTCTTTGTCATTTTCACTGAACCAGGT  189

seq1  CACCTCCTCTAATTATGACTGAAAACTGTTCAAGCATTGAATAATCATAG  247
      |  ||||||||| |||||||| ||||||||||||||||||||||||||||
seq2  CCACTCCTCTAAATATGACTGGAAACTGTTCAAGCATTGAATAATCATAG  239

seq1  TATTTGAAGACTGCTGTGCTTAGGGGCTGCC-ACTGTCCTACAAAATCTG  296
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TATTTGAAGACTGCTGTGCTTAGGGGCTGCCAACTGTCCTACAAAATCTG  289

seq1  CATGTAGAATTGATCTCCAAGCCAAGGATATTTGACCTCTGCTGTATCAA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAGAATTGATCTCCAAGCCAAGGATATTTGACCTCTGCTGTATCAA  339

seq1  GGGCTCTATTTGCAATTTCCCAGAAGCCCAGTGGTTCTGCCTGATTTGCA  396
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTCTATTTGCAATTTCCCAGAAGCCCAGTGGTTCTGCCTGATTTGCA  389

seq1  TTGGTATTTGCATAAATCTGCATATGTATAGTTTTCAGCTTTGGACCATG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTATTTGCATAAATCTGCATATGTATAGTTTTCAGCTTTGGACCATG  439

seq1  AGTT-AAGTATGTCTTCTTATTTGTCTGAAAGTTTAAAATTGGGAGTAAA  495
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAAAGTATGTCTTCTTATTTGTCTGAAAGTTTAAAATTGGGAGTAAA  489

seq1  AATGGAGATTATAGCTATCCAAGAAAGAATAGTTGTGGTCCAGGAAATAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGAGATTATAGCTATCCAAGAAAGAATAGTTGTGGTCCAGGAAATAT  539

seq1  CTTTTAGTTCTTCCTGAATGTGTCATTTCAGGTAAGGATGCAACCAAAAC  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGTTCTTCCTGAATGTGTCATTTCAGGTAAGGATGCAACCAAAAC  589

seq1  TCAAGCATTTCTGGAACTTAAACTCCTTTAGAAGTAACTGCAGTCAATCC  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGCATTTCTGGAACTTAAACTCCTTTAGAAGTAACTGCAGTCAATCC  639

seq1  TCTGCCTTCCATTTCTACAGGGTCGAAGGTTCAGAACCTATCAGCTAAAA  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTTCCATTTCTACAGGGTCGAAGGTTCAGAACCTATCAGCTAAAA  689

seq1  ATTGCTGCTTTACTTTTTTTCCTCTTGTCCTTCTTCACCCACAAATGCTG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTGCTTTACTTTTTTTCCTCTTGTCCTTCTTCACCCACAAATGCTG  739

seq1  AGATTACAAGTACATATCACCATGTCCTGTATAAATATTCCTTTGTGTGT  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTACAAGTACATATCACCATGTCCTGTATAAATATTCCTTTGTGTGT  789

seq1  GTGTATGCTTATGTGCATGCACGGGTACATGTGTGCATTTTTTTCTATAA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTATGCTTATGTGCATGCACGGGTACATGTGTGCATTTTTTTCTATAA  839

seq1  TACACAGGTGTACACACATCTATGCATTTGAATGCAAGTGCCTGTAGAGG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAGGTGTACACACATCTATGCATTTGAATGCAAGTGCCTGTAGAGG  889

seq1  TCAGAGAACAAGCTCAGCTGCAATTTTTCAGGTGCTGTCTGTCTTGGTTT  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAGAACAAGCTCAGCTGCAATTTTTCAGGTGCTGTCTGTCTTGGTTT  939

seq1  TTGAGTTATATTCTCTCACTGTGCTGGGGATTGCCAAGTAGACTAGCCTG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTTATATTCTCTCACTGTGCTGGGGATTGCCAAGTAGACTAGCCTG  989

seq1  GTTGGCTAACAAAACAAAGAATCCTCCTGTCTCTGCCTCTTTCCCCAATG  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGCTAACAAAACAAAGAATCCTCCTGTCTCTGCCTCTTTCCCCAATG  1039

seq1  CTGGAATTC  1054
      |||||||||
seq2  CTGGAATTC  1048