BAC Information

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BAC

Clone NameB6Ng01-067M12
Chromosome8 (Build37)
Map Location 38,979,089 - 38,980,178
singlet/doubletsinglet
Overlap geneSgcz
Upstream geneA730069N07Rik, AI429214, LOC666877, LOC100041616, 1700016D18Rik, LOC641121, LOC621149
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-067M12.bB6Ng01-067M12.g
ACCDH886560DH886561
length5101,075
definitionDH886560|Mus musculus domesticus DNA, BAC clone: B6Ng01-067M12, 5' end.DH886561|Mus musculus domesticus DNA, BAC clone: B6Ng01-067M12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcctattagattatgctgaaaggaccctgatatagctgtctcttg
tcagagtatgcctgggcctagcaaacatagaagtggatgctcacagtcgg
ctattggatggatcacatggcccccaatgaaggagctagagaaagtacca
aagaagctaaagggatctgcaaccctataggtggaacaacattatgaact
aaccagtaccccggagctcttgactctagctgcatatgcatcaaaagatg
gcctagtcggccatcactggaaagagaggcccattggacacgcaaacttt
atatgccccagtacaggggaacgccagggccataaaaggggagtgggtgg
gtaggggaga

gaattccttggctctgcttctgtttgaagttgaaagatggagatgaattc
atgagcattccttaagtgattaacatgccagtgagaagaggaaaggagga
atcggacccaaactgaaggcaagagagtcagataaaaattaacagtagag
ttatcaagttttatcctgcttttcattacacatcaggaatccataagcaa
aaaaaaaaaaaacaaaaaacaaaaaaacaaaaaaacaaaaaaacaaaaaa
aaacatgctttcaatttaaatactctctatgtccttactattttaagaaa
atatgaaagcattttagaagaaaatagcattaaaggtattgtacttaatc
tgaggttttttttttttgacctctgcatttatcatttatttaatgttcac
cagtcaattggaacatgcacagaatgtaatgatgtctctgtgtcatatca
catcttatcaagggacaggcccaggaaaggagttcattttcatgcaggca
agtgactgagtttctgcattccagtcattccctgtccacagctcttccca
atgggccatgaatgctgtgagcctgcagcaagcaggtggtgtcagtgggt
ggcttctgtcatgggaggggcaggctcagctttgccgctgatcacaggct
cccttggtttccttgccttaaaagcagtctctacacaaaaccaccacctg
aggacttctgaatggatttttatttatttatttatttatttatttattta
tttatttatttattatatagattattttctttatttacatttcaaatgct
atcctgaaagttccctgtaccctccctctgcccagcttctcctacccccc
cacttccaacttcttggccctggcattgccctgtactggggcatataaag
tttcaagaccaaggggtttaatctgagtcttaaataggatcctgttgtca
aggctacagaacactcatataacccttccagattagattaagtccattct
tttgactaagaagacaggcctccattgactattctgtatcaagggaatac
gtataaggttatgggcatatatttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_38979089_38980178
seq2: B6Ng01-067M12.g_70_1144

seq1  GAATTCCTTGGCTCTGCTTCTGTTTGAAGTTGAAAGATGGAGATGAATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGGCTCTGCTTCTGTTTGAAGTTGAAAGATGGAGATGAATTC  50

seq1  ATGAGCATTCCTTAAGTGATTAACATGCCAGTGAGAAGAGGAAAGGAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGCATTCCTTAAGTGATTAACATGCCAGTGAGAAGAGGAAAGGAGGA  100

seq1  ATCGGACCCAAACTGAAGGCAAGAGAGTCAGATAAAAATTAACAGTAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCGGACCCAAACTGAAGGCAAGAGAGTCAGATAAAAATTAACAGTAGAG  150

seq1  TTATCAAGTTTTATCCTGCTTTTCATTACACATCAGGAATCCATAAGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCAAGTTTTATCCTGCTTTTCATTACACATCAGGAATCCATAAGCAA  200

seq1  AAAAAAAAAAAACAAAAAACAAAAAAACAAAAAAACAAAAAAACAAAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAAAACAAAAAACAAAAAAACAAAAAAACAAAAAAACAAAAAA  250

seq1  AAACATGCTTTCAATTTAAATACTCTCTATGTCCTTACTATTTTAAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGCTTTCAATTTAAATACTCTCTATGTCCTTACTATTTTAAGAAA  300

seq1  ATATGAAAGCATTTTAGAAGAAAATAGCATTAAAGGTATTGTACTTAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAAGCATTTTAGAAGAAAATAGCATTAAAGGTATTGTACTTAATC  350

seq1  TGAGGTTTTTTTTTTTTGACCTCTGCATTTATCATTTATTTAATGTTCAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTTTTTTTTTTTTGACCTCTGCATTTATCATTTATTTAATGTTCAC  400

seq1  CAGTCAATTGGAACATGCACAGAATGTAATGATGTCTCTGTGTCATATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAATTGGAACATGCACAGAATGTAATGATGTCTCTGTGTCATATCA  450

seq1  CATCTTATCAAGGGACAGGCCCAGGAAAGGAGTTCATTTTCATGCAGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTATCAAGGGACAGGCCCAGGAAAGGAGTTCATTTTCATGCAGGCA  500

seq1  AGTGACTGAGTTTCTGCATTCCAGTCATTCCCTGTCCACAGCTCTTCCCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACTGAGTTTCTGCATTCCAGTCATTCCCTGTCCACAGCTCTTCCCA  550

seq1  ATGGGCCATGAATGCTGTGAGCCTGCAGCAAGCAGGTGGTGTCAGTGGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCCATGAATGCTGTGAGCCTGCAGCAAGCAGGTGGTGTCAGTGGGT  600

seq1  GGCTTCTGTCATGGGAGGGGCAGGCTCAGCTTTGCCGCTGATCACAGGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCTGTCATGGGAGGGGCAGGCTCAGCTTTGCCGCTGATCACAGGCT  650

seq1  CCCTTGGTTTCCTTGCCTTAAAAGCAGTCTCTACACAAAACCACCACCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTGGTTTCCTTGCCTTAAAAGCAGTCTCTACACAAAACCACCACCTG  700

seq1  AGGACTTCTGAATGGATTTTATTTATTTATTTATTTATTTATTTATTTAT  750
      ||||||||||||||||||   |||||||||||||||||||||||||||||
seq2  AGGACTTCTGAATGGATT---TTTATTTATTTATTTATTTATTTATTTAT  747

seq1  TTATTTATTTATTTATTTATATTAGA-TATTTTCTTTATTTACATTTCAA  799
      ||||||||||||||| ||||| |||| |||||||||||||||||||||||
seq2  TTATTTATTTATTTA-TTATA-TAGATTATTTTCTTTATTTACATTTCAA  795

seq1  ATGCTATCCTGAAAGTTCCCTGTACCCTCCCTCTGCCCAGC-TCTCCTAC  848
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ATGCTATCCTGAAAGTTCCCTGTACCCTCCCTCTGCCCAGCTTCTCCTAC  845

seq1  CCCCCCCACTCCCACTTCTTGGCCCTGGCATTGCCCTGTACTGGGGCATA  898
      ||||||   ||| |||||||||||||||||||||||||||||||||||||
seq2  CCCCCCACTTCCAACTTCTTGGCCCTGGCATTGCCCTGTACTGGGGCATA  895

seq1  TAAAGTTTGCAAGACCAAGGGGTCTTAATCTGAGTCCTTAAATAGGATCC  948
      |||||||| |||||||||||||| ||||||||||| ||||||||||||||
seq2  TAAAGTTT-CAAGACCAAGGGGT-TTAATCTGAGT-CTTAAATAGGATCC  942

seq1  TGTAGTCAAGGCTACAGAACACTCTAATAACCCTTCCAGAATTAGATTAA  998
      ||| ||||||||||||||||||||  ||||||||||||| ||||||||||
seq2  TGTTGTCAAGGCTACAGAACACTCATATAACCCTTCCAG-ATTAGATTAA  991

seq1  GTCCATTTCTTTTGACTTAAGAAGAACAGGCTCTCCATTGACTATATCTG  1048
      ||||| |||||||||| ||||||| |||||| ||||||||||||| ||||
seq2  GTCCA-TTCTTTTGAC-TAAGAAG-ACAGGC-CTCCATTGACTAT-TCTG  1036

seq1  TATCACAGGAATACAGTATAGGGTTTATTGGCCATATATTTT  1090
      |||||  ||||||| ||||| ||||   ||| ||||||||||
seq2  TATCAAGGGAATAC-GTATAAGGTT--ATGGGCATATATTTT  1075


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