BAC Information

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BAC

Clone NameB6Ng01-068F19
Chromosome8 (Build37)
Map Location 129,193,418 - 129,330,487
singlet/doubletdoublet
Overlap genenone
Upstream gene4933403G14Rik, 2310079N02Rik, E330039K12Rik, BC021891, Kcnk1, Slc35f3, LOC668434, 1810063B05Rik, EG619653, Irf2bp2
Downstream geneTomm20, Rbm34, LOC100043368, Gabarapl2-ps8_1688.1, Pard3, EG628847
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068F19.bB6Ng01-068F19.g
ACCDH886971DH886972
length809983
definitionDH886971|Mus musculus domesticus DNA, BAC clone: B6Ng01-068F19, 5' end.DH886972|Mus musculus domesticus DNA, BAC clone: B6Ng01-068F19, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(129,193,418 - 129,194,226)(129,329,493 - 129,330,487)
sequence
gaattccttgcttaacttgcgtaggaaaagtccttccacacaggacatga
agcctgcctcaccaagccatgttctgacattttgcctctgctattatcgt
agaggtgctttgtgacccccagtagacagccattacaattcttatctcag
agggtggcctttcaatgtgaggagaagacgaagatctaaaggggacggga
cattccagggaacgccaccataacagagcatttttccagacagctgccca
taactgcatagcacagcctgtcttctttattatctgaagtttacactgag
gggaggctccagagagccccggtaggcatctcatagaagagctgtccatg
agccagaccctgggcgggaagagttgagagggaaagaggggagaggtaga
agctgtttgcatgggtgtctccaaggctccactcaggtgggtggggaaga
ctctaaagacctgttttaacggtgggaggtcttggccatctctgtgccca
aatcagtgttttggggtttgccaaattaccggccctccctacagagtcta
ctcctagcagcggtctctcctttgtgaaagctgtcattgaggggctggct
ttgaaggttggcgagactcttggggattggcacacctgtgaacgctcagg
ctcggacacgctaagtcttgcagctttctgctacggtggtcaggaggtga
gccatctgacatacgcatgtatgggtctctgggaccatcctgtctttata
aacaggattttcacatttttaaggtttattttttaatgtgtgtgtgtgta
tgggtgtgt
gaattcatcatgcagtaggatgggggaacctgggtctgtccctagtgtaa
ggagacaaaagaaaggtttctcccagacaagagcagtgggaatcaagtag
cagacagagaaggcacccagtaggaaaggccccagagctcacttggccat
gatgtcatggtagagagctgccagcctgcagatgaggcacttgccacctg
tcaaccgggtgattgatgcctgcctgaaagggtgagggcatgggtgacag
aactcgccctttgccttttcacatgaggtcctagggtaaatatgtcttgg
gacaggtagaatgtgaggaaagagacactgagctgttaagtcacaggtgt
gggcctcgggtcacagaaaagcagggagcctgatggtctggcaggcctga
aggctactggaaacagagggtgggaaccggggtagccagggaggaaatgc
cctcgtctcacaggtttcttgagaaggaaagtctgggctgttctgaaggg
gaacttagagaccagggaccggatgtgagcaggggaccaggaggagggag
gaacaatggccattcttccaccacaagctgaacttccccgaaacaggaag
ggcctgccaggaggggagggtcaggctgagggacaggaaggaaggggcct
gagggaaagccaaaggcctgtgtactgtgtttggaattcacaggcccctg
tctgcaggtccccaaaacagtcagcaaactcagttcacactgtagggtgt
gactttcccaggctctgctgccttcccctctccctctcagggcctcctca
ggaccctgatgtgaggccttgcaggcttctcagggcctggttcttgcatg
ctgaatgagtgtttgtttttcagtccctgacacctacggtcttcacacat
ggggaggaggagttccagaaaaaaacaaggatgtgccaagtaacaaggca
cacagcctctcctcttcgaaaagcgcctatctc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_129193418_129194226
seq2: B6Ng01-068F19.b_43_851

seq1  GAATTCCTTGCTTAACTTGCGTAGGAAAAGTCCTTCCACACAGGACATGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTGCTTAACTTGCGTAGGAAAAGTCCTTCCACACAGGACATGA  50

seq1  AGCCTGCCTCACCAAGCCATGTTCTGACATTTTGCCTCTGCTATTATCGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGCCTCACCAAGCCATGTTCTGACATTTTGCCTCTGCTATTATCGT  100

seq1  AGAGGTGCTTTGTGACCCCCAGTAGACAGCCATTACAATTCTTATCTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTGCTTTGTGACCCCCAGTAGACAGCCATTACAATTCTTATCTCAG  150

seq1  AGGGTGGCCTTTCAATGTGAGGAGAAGACGAAGATCTAAAGGGGACGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGGCCTTTCAATGTGAGGAGAAGACGAAGATCTAAAGGGGACGGGA  200

seq1  CATTCCAGGGAACGCCACCATAACAGAGCATTTTTCCAGACAGCTGCCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCAGGGAACGCCACCATAACAGAGCATTTTTCCAGACAGCTGCCCA  250

seq1  TAACTGCATAGCACAGCCTGTCTTCTTTATTATCTGAAGTTTACACTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGCATAGCACAGCCTGTCTTCTTTATTATCTGAAGTTTACACTGAG  300

seq1  GGGAGGCTCCAGAGAGCCCCGGTAGGCATCTCATAGAAGAGCTGTCCATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCTCCAGAGAGCCCCGGTAGGCATCTCATAGAAGAGCTGTCCATG  350

seq1  AGCCAGACCCTGGGCGGGAAGAGTTGAGAGGGAAAGAGGGGAGAGGTAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAGACCCTGGGCGGGAAGAGTTGAGAGGGAAAGAGGGGAGAGGTAGA  400

seq1  AGCTGTTTGCATGGGTGTCTCCAAGGCTCCACTCAGGTGGGTGGGGAAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTTTGCATGGGTGTCTCCAAGGCTCCACTCAGGTGGGTGGGGAAGA  450

seq1  CTCTAAAGACCTGTTTTAACGGTGGGAGGTCTTGGCCATCTCTGTGCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAAAGACCTGTTTTAACGGTGGGAGGTCTTGGCCATCTCTGTGCCCA  500

seq1  AATCAGTGTTTTGGGGTTTGCCAAATTACCGGCCCTCCCTACAGAGTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTGTTTTGGGGTTTGCCAAATTACCGGCCCTCCCTACAGAGTCTA  550

seq1  CTCCTAGCAGCGGTCTCTCCTTTGTGAAAGCTGTCATTGAGGGGCTGGCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAGCAGCGGTCTCTCCTTTGTGAAAGCTGTCATTGAGGGGCTGGCT  600

seq1  TTGAAGGTTGGCGAGACTCTTGGGGATTGGCACACCTGTGAACGCTCAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGGTTGGCGAGACTCTTGGGGATTGGCACACCTGTGAACGCTCAGG  650

seq1  CTCGGACACGCTAAGTCTTGCAGCTTTCTGCTACGGTGGTCAGGAGGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCGGACACGCTAAGTCTTGCAGCTTTCTGCTACGGTGGTCAGGAGGTGA  700

seq1  GCCATCTGACATACGCATGTATGGGTCTCTGGGACCATCCTGTCTTTATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATCTGACATACGCATGTATGGGTCTCTGGGACCATCCTGTCTTTATA  750

seq1  AACAGGATTTTCACATTTTTAAGGTTTATTTTTTAATGTGTGTGTGTGTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGATTTTCACATTTTTAAGGTTTATTTTTTAATGTGTGTGTGTGTA  800

seq1  TGGGTGTGT  809
      |||||||||
seq2  TGGGTGTGT  809

seq1: chr8_129329493_129330487
seq2: B6Ng01-068F19.g_69_1051 (reverse)

seq1  GAGATAGGCGTCTTTTCGAAAGAGGAGGAGGCTGTGTGCCTTGGTTACTT  50
      |||||||||| ||||||| ||||||| ||||||||||||||| |||||||
seq2  GAGATAGGCG-CTTTTCG-AAGAGGA-GAGGCTGTGTGCCTT-GTTACTT  46

seq1  TGGCCACCTTCCTTTGTTTTTTTTCTGGAAACTCCTCCTCCCCATGTGTG  100
       |  ||   |||||   ||||||||||| |||||||||||||||||||||
seq2  GGCACA---TCCTT--GTTTTTTTCTGG-AACTCCTCCTCCCCATGTGTG  90

seq1  AAGACCGTAGGTGTCAGGGACCTGAAAAACAAACACTCATTCAGCATGCA  150
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  AAGACCGTAGGTGTCAGGGA-CTGAAAAACAAACACTCATTCAGCATGCA  139

seq1  AGAACCAGGCCCTGAGAAGCCCTGCAAGGCCTCACATCAGGGTCCTGAGG  200
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  AGAACCAGGCCCTGAGAAG-CCTGCAAGGCCTCACATCAGGGTCCTGAGG  188

seq1  AGGCCCTGAGAGGGAGAGGGGAAGGCAGCAGAGCCTGGGAAAGTCACACC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCTGAGAGGGAGAGGGGAAGGCAGCAGAGCCTGGGAAAGTCACACC  238

seq1  CTACAGTGTGAACTGAGTTTGCTGACTGTTTTGGGGACCTGCAGACAGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAGTGTGAACTGAGTTTGCTGACTGTTTTGGGGACCTGCAGACAGGG  288

seq1  GCCTGTGAATTCCAAACACAGTACACAGGCCTTTGGCTTTCCCTCAGGCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGAATTCCAAACACAGTACACAGGCCTTTGGCTTTCCCTCAGGCC  338

seq1  CCTTCCTTCCTGTCCCTCAGCCTGACCCTCCCCTCCTGGCAGGCCCTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTTCCTGTCCCTCAGCCTGACCCTCCCCTCCTGGCAGGCCCTTCC  388

seq1  TGTTTCGGGGAAGTTCAGCTTGTGGTGGAAGAATGGCCATTGTTCCTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCGGGGAAGTTCAGCTTGTGGTGGAAGAATGGCCATTGTTCCTCCC  438

seq1  TCCTCCTGGTCCCCTGCTCACATCCGGTCCCTGGTCTCTAAGTTCCCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTGGTCCCCTGCTCACATCCGGTCCCTGGTCTCTAAGTTCCCCTT  488

seq1  CAGAACAGCCCAGACTTTCCTTCTCAAGAAACCTGTGAGACGAGGGCATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAACAGCCCAGACTTTCCTTCTCAAGAAACCTGTGAGACGAGGGCATT  538

seq1  TCCTCCCTGGCTACCCCGGTTCCCACCCTCTGTTTCCAGTAGCCTTCAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCCTGGCTACCCCGGTTCCCACCCTCTGTTTCCAGTAGCCTTCAGG  588

seq1  CCTGCCAGACCATCAGGCTCCCTGCTTTTCTGTGACCCGAGGCCCACACC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCAGACCATCAGGCTCCCTGCTTTTCTGTGACCCGAGGCCCACACC  638

seq1  TGTGACTTAACAGCTCAGTGTCTCTTTCCTCACATTCTACCTGTCCCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGACTTAACAGCTCAGTGTCTCTTTCCTCACATTCTACCTGTCCCAAG  688

seq1  ACATATTTACCCTAGGACCTCATGTGAAAAGGCAAAGGGCGAGTTCTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATTTACCCTAGGACCTCATGTGAAAAGGCAAAGGGCGAGTTCTGTC  738

seq1  ACCCATGCCCTCACCCTTTCAGGCAGGCATCAATCACCCGGTTGACAGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCATGCCCTCACCCTTTCAGGCAGGCATCAATCACCCGGTTGACAGGT  788

seq1  GGCAAGTGCCTCATCTGCAGGCTGGCAGCTCTCTACCATGACATCATGGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGTGCCTCATCTGCAGGCTGGCAGCTCTCTACCATGACATCATGGC  838

seq1  CAAGTGAGCTCTGGGGCCTTTCCTACTGGGTGCCTTCTCTGTCTGCTACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGAGCTCTGGGGCCTTTCCTACTGGGTGCCTTCTCTGTCTGCTACT  888

seq1  TGATTCCCACTGCTCTTGTCTGGGAGAAACCTTTCTTTTGTCTCCTTACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCCACTGCTCTTGTCTGGGAGAAACCTTTCTTTTGTCTCCTTACA  938

seq1  CTAGGGACAGACCCAGGTTCCCCCATCCTACTGCATGATGAATTC  995
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGGACAGACCCAGGTTCCCCCATCCTACTGCATGATGAATTC  983