BAC Information

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BAC

Clone NameB6Ng01-068G15
Chromosome8 (Build37)
Map Location 54,166,331 - 54,167,138
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100040220, LOC623935, 1190028D05Rik, LOC676688
Downstream geneAga, Neil3, LOC100040107, Vegfc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068G15.bB6Ng01-068G15.g
ACCDH887007DH887008
length812571
definitionDH887007|Mus musculus domesticus DNA, BAC clone: B6Ng01-068G15, 5' end.DH887008|Mus musculus domesticus DNA, BAC clone: B6Ng01-068G15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttcagaaaaaagtactttaactgggtatcttaaggtttgttt
aagaaaatctgaaaatagcctggcagtggtggcacatgcctttaatccca
gcacttgggaggcagaggcaggtggatttctgagttcgaggccagcctgg
tcttctcagtgagttccatgacagccagggcaatacagagaaaccctgtc
tcagaaaagaaagaaaaaagaaagaaaatctgacaagataaaataaacct
caaatgcatatgttataataagttttgctagcatttagataattattgct
tgctcaatatctgttcaagttcttggtttaaagtcctttggccggtgcat
tttgcatattttcccagcttacatactttgaaataattcttggcttctta
ttttttagattttttgtgtggatttgtgacgagcttggacgtaagtgtct
gggatctgagtccactccatggaagaggcaggagatactgagctaaactg
tttaagacacagtgtgaattagtaaatacacatagattgccagctgtaag
aagcagcataatggggcataaaaagaaatgcacttcaagatgtcttgtgt
gtctgatgcctacagtgtatttttttttttaatgctggtagttcattgtg
attacttctgcaaactttattgtatgtcgtgagtttctgagattttctca
aagacaatggaaaataaatccttcaaataatctcatttttgctttttatc
taaatgtatcacttttattcccttcttaccttttcattcaacgtatttct
aatatttaattt

ctgatctttccaagacttttaacatgaacgggtgtaataatttgtcaaag
gcttttcatcatctaatgagatgatgaccatttgaatttttctcaatgag
tttatttatgagtggatatttggtgtgttttgtttttgtatattgaacga
tccctgcatccctgcaaagaagcctacttgatcattgtgaatgattgttg
tgatgtgttcttgatttgtgagaattttgttagtcatttttgcatcaata
ttcatagatattaattatttaaaattggtctgaagttctctctcattgtt
gaagctttgtgtgggttaggtaccagcgtaactgtgggttcatagaacaa
attagatagtgttactactgtttctatcttgtaaaatggtttgagaagta
ttggtattaggacttctttgaacgtctgataaaatgctgcactaaaacca
tctgaccctggacatcttttgtttgggagacttttaatgactgcttctat
ttccttaggatttatcaggtattttagattgtttatctcatccagattta
aattttgcacctggtatctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_54166331_54167138
seq2: B6Ng01-068G15.b_41_852

seq1  GAATTCATTTCAGAAAAAAGTACTTTAACTGGGTATCTTAAGGTTTGTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCAGAAAAAAGTACTTTAACTGGGTATCTTAAGGTTTGTTT  50

seq1  AAGAAAATCTGAAAATAGCCTGGCAGTGGTGGCACATGCCTTTAATCCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAATCTGAAAATAGCCTGGCAGTGGTGGCACATGCCTTTAATCCCA  100

seq1  GCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTTGGGAGGCAGAGGCAGGTGGATTTCTGAGTTCGAGGCCAGCCTGG  150

seq1  TCTTCTCAGTGAGTTCCATGACAGCCAGGGCAATACAGAGAAACCCTGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTCAGTGAGTTCCATGACAGCCAGGGCAATACAGAGAAACCCTGTC  200

seq1  TCAGAAAAGAAAGAAAAAAGAAAGAAAATCTGACAAGATAAAATAAACCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAAGAAAGAAAAAAGAAAGAAAATCTGACAAGATAAAATAAACCT  250

seq1  CAAATGCATATGTTATAATAAGTTTTGCTAGCATTTAGATAATTATTGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATGCATATGTTATAATAAGTTTTGCTAGCATTTAGATAATTATTGCT  300

seq1  TGCTCAATATCTGTTCAAGTTCTTGGTTTAAAGTCCTTTGGCCGGTGCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCAATATCTGTTCAAGTTCTTGGTTTAAAGTCCTTTGGCCGGTGCAT  350

seq1  TTTGCATATTTTCCCAGCTTACATACTTTGAAATAATTCTTGGCTTCTTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCATATTTTCCCAGCTTACATACTTTGAAATAATTCTTGGCTTCTTA  400

seq1  TTTTTTAGATTTTTTGTGTGGATTTGTGACGAGCTTGGACGTAAGTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTAGATTTTTTGTGTGGATTTGTGACGAGCTTGGACGTAAGTGTCT  450

seq1  GGGATCTGAGTCCACTCCATGGAAGAGGCAGGAGATACTGAGCTAAACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATCTGAGTCCACTCCATGGAAGAGGCAGGAGATACTGAGCTAAACTG  500

seq1  TTTAAGACACAGTGTGAATTAGTAAATACACATAGATTGCCAGCTGTAAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGACACAGTGTGAATTAGTAAATACACATAGATTGCCAGCTGTAAG  550

seq1  AAGCAGCATAATGGGGCATAAAAAGAAATGCACTTCAAGATGTCTTGTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAGCATAATGGGGCATAAAAAGAAATGCACTTCAAGATGTCTTGTGT  600

seq1  GTCTGATGCCTACAGTGTATTTTTTTTTTTAATGCTGGTAGTTCATTGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGATGCCTACAGTGTATTTTTTTTTTTAATGCTGGTAGTTCATTGTG  650

seq1  ATTACTTCTGCAAACTTTATTGTATGTCGTGAGTTTCTGAGA-TTTCTCA  699
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  ATTACTTCTGCAAACTTTATTGTATGTCGTGAGTTTCTGAGATTTTCTCA  700

seq1  AAGACAATGGAAAAT-AATCCTTCAAAGAATCTCA-TTTTGCTTTTTATC  747
      ||||||||||||||| ||||||||||| ||||||| ||||||||||||||
seq2  AAGACAATGGAAAATAAATCCTTCAAATAATCTCATTTTTGCTTTTTATC  750

seq1  TAAATGTATCACTTTTATTCCCTTCTTACC-TTTCATTCAACGTATTTCT  796
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  TAAATGTATCACTTTTATTCCCTTCTTACCTTTTCATTCAACGTATTTCT  800

seq1  AATATTTAATTT  808
      ||||||||||||
seq2  AATATTTAATTT  812


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