BAC Information

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BAC

Clone NameB6Ng01-069K05
Chromosome8 (Build37)
Map Location 36,112,856 - 36,237,169
singlet/doubletdoublet
Overlap geneLOC666792, LOC666797, LOC666804
Upstream geneDctn6, LOC100042777, Mboat4, Leprotl1, LOC666694, Tmem66, LOC619780, LOC666718, EG234159, LOC666746, Dusp4, LOC675578, Tnks
Downstream genePpp1r3b, Thex1, Mfhas1, LOC100041572, Gm501, Cldn23, LOC671641, D8Ertd82e
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-069K05.bB6Ng01-069K05.g
ACCDH887887DH887888
length1,016949
definitionDH887887|Mus musculus domesticus DNA, BAC clone: B6Ng01-069K05, 5' end.DH887888|Mus musculus domesticus DNA, BAC clone: B6Ng01-069K05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(36,236,123 - 36,237,169)(36,112,856 - 36,113,800)
sequence
gaattcattctagaatgttactgggcatactgatcatgttttaaataact
tcacgttccttctacgattaaaggaacttggagccctttaaactttctgt
acatcgtgattcattccggttgttttgagtctcattgccttttgttactt
tgtgtatcatctttgttacttcatgcatccttatcttttgatactttgtg
tatcattatcttttgttactttataaatcactgtctttgttactttgtgt
gtcttgttactttgtgcatcattatcttttgttacattgtgtatcattag
cttctggtactttggatatcattatccttttcccaccactgccctgtatg
ccgttctttgtgagatttgctcatactttggccactcactgagctcagga
tgtcatttgttatcgaaacattgataaataaattacattcctctgtttga
aacaaacccttggactttcagctgatgtggctgtttgaccttcgtgttaa
aagtcagctaactgtgttgtcattttgaagcttcatgaggctgattcaga
gtatgtacgcccctttcttttttcgttttctttttctttggtttgaattt
tattcagttattcatctatttgtccctttctatagaaaaaaagaacacag
gcctgttcccctttgcagtaccctcacatcccctaaatccttctcatctg
ttctgaaacagtcgatctatgctctgtaataaacctttctctttctgtcg
tccaattgcctaattcgttcttaactatgctattcttacactatcaactg
atcattaaaaacacacaaaacgacaaccactctctctgtctttcctctag
aattctagttgatctctgtatatcatcgttgtaactttataatggttatc
tgttatagaacttattatgacaagttcttgctgtctcctccgcagttgta
ttgaaatcctaaatcctagtcttcaggtggggctctttgaatctgattcc
tgaaaccaaattaaag
gaattccactgatgatcagtggagaatgtgtttattacttttttattggc
ttgacccttcctctgggaagagagaacctcaactgagacaatgctcccat
tagagttacctttaaaccaatctatgataacctttcttgaagaatgggtg
atatagaaccccagcccactgtggggtattactgtctctggcaggtagtt
cagggttctataagaaagcattctgagtaagtcatggggagtaagctaaa
aagcatcattcggccatggcctgaccttagttcctgcctccaggttcctg
ccttgagttcttgccctgactcctttcatggactgtgaactttaaaatga
aagacatgtctttgctcttggtcatgatttttatcacaggaatagaaagc
aaactaggacagagagattgagacctgactccaggacagtcttcgctctc
tagtactgccctaattctgtgtatagaaggcctatttgtgttaaccacac
agcaaccattaatatctgttttatcacctgatcatacaatacgactgata
tgttcccaagcttaattcacggtttcaatgtttttatatgcattcattca
tacattcactcattttaggtatgtgtgcatgcatgtatgtatgtctgtat
gtatttatgcacgccctgctgcggatgtgtagggctgagcacactctggg
gatataggtacttggcgttccaccatgcttgagacagtctctggcatgat
tactgtggcgtttgcacagactagatacaccccgacctcgcacaaataca
ctttggcactttatctactgagggtcttctcatctttgctatttactctg
gagacaaatcttgtcatatgaccctttgctccctggaactctctgtgtag
cccaggctgcctcaacaaattcccactgaatcctctgggcctggtctat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_36236123_36237169
seq2: B6Ng01-069K05.b_42_1057 (reverse)

seq1  CTTTAATTTCTGCTTTCAGGACTCAGACTTCAAAAGAAGCCCCATCCTGA  50
      ||||||||  || |||||||| ||||| ||||||   ||||||| |||||
seq2  CTTTAATT--TGGTTTCAGGAATCAGA-TTCAAA--GAGCCCCA-CCTGA  44

seq1  AGGACTAGAATTTAGGATTTCAATACAAACTTGTGGA-GAGGAAGCATGT  99
      | |||||| |||||||||||||||||||   || ||| |||  |||| | 
seq2  A-GACTAGGATTTAGGATTTCAATACAA--CTGCGGAGGAGACAGCAAG-  90

seq1  AACTTAGTACATAATAAGTTCTATAACTATAATAACACAATATTAAAGTT  149
      ||||| || ||||||||||||||||||    ||||| || || |||||||
seq2  AACTT-GT-CATAATAAGTTCTATAAC--AGATAAC-CATTA-TAAAGTT  134

seq1  ATCAAGGATAATATAACAGAGATCAAACTAGAACTTCTAGAAGTGAAAAG  199
      | ||| ||| |||| ||||||||| |||||||| |||||||   | ||||
seq2  A-CAACGATGATAT-ACAGAGATC-AACTAGAA-TTCTAGA---GGAAAG  177

seq1  ACAGAGAAACTGGTTTGTTTGTTTTGTTTTGTTTTTTAATGACTCAGTTG  249
      ||||||| | |||||   | ||||||| |   |||||||||| |||||||
seq2  ACAGAGAGAGTGGTT--GTCGTTTTGTGT--GTTTTTAATGA-TCAGTTG  222

seq1  ATAGTGTAAGAATAGCATAGCTAAAGAAAGAATTAGGAAACTGGAAGACA  299
      |||||||||||||||||||| | ||||| |||||||| || |||| ||||
seq2  ATAGTGTAAGAATAGCATAG-TTAAGAACGAATTAGGCAATTGGACGACA  271

seq1  GAAAGAGAAAAGCTTATTACAGAGCCTAGAAAGACGGTTTCAGAACAGAT  349
      |||||||||| | |||||||||||| ||||  ||| ||||||||||||||
seq2  GAAAGAGAAAGGTTTATTACAGAGCATAGATCGACTGTTTCAGAACAGAT  321

seq1  GAGAATTTATTTA-GGGATGTGAGGGAATCTACAAAGGGGAACAGGGCTC  398
      |||||   ||||| |||||||||||| | || |||||||||||||| || 
seq2  GAGAA-GGATTTAGGGGATGTGAGGGTA-CTGCAAAGGGGAACAGGCCTG  369

seq1  TTTTTTTTTTTTATAAAGAAAGGGACAAATAAATAAATAAATAAATAAAA  448
      | || ||||||| || ||||||||||||||| || ||||| | |||||||
seq2  TGTTCTTTTTTTCTATAGAAAGGGACAAATAGATGAATAACTGAATAAAA  419

seq1  ATTAAAACAAAGAAAAAGAAAACGAAAAAAGAAAGGGGCGTACATACTCT  498
       | ||| |||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAAACCAAAGAAAAAGAAAACGAAAAAAGAAAGGGGCGTACATACTCT  469

seq1  GAATCAGCCTCATGAAGCTTACAAAATGACAACACAGTTAGCTGACTCTT  548
      |||||||||||||||||||| |||||||||||||||||||||||||| ||
seq2  GAATCAGCCTCATGAAGCTT-CAAAATGACAACACAGTTAGCTGACTTTT  518

seq1  AACAGGAAGGTCAAACAGGCACATCAGATGAAAGTCCAAGGGTTTGTTTC  598
      |||| ||||||||||||| |||||||| ||||||||||||||||||||||
seq2  AACACGAAGGTCAAACAGCCACATCAGCTGAAAGTCCAAGGGTTTGTTTC  568

seq1  AAACAGAGGAATGTAATTTATTTATCAATACTGAGATAACAAATGACATC  648
      |||||||||||||||||||||||||||||  |  ||||||||||||||||
seq2  AAACAGAGGAATGTAATTTATTTATCAATGTTTCGATAACAAATGACATC  618

seq1  CTGAGCTCAGAGAGTGGCCAATGTATGAGCAAATCTAACAAATAATGGCA  698
      |||||||||| |||||||||| |||||||||||||| ||||| || ||||
seq2  CTGAGCTCAGTGAGTGGCCAAAGTATGAGCAAATCTCACAAAGAACGGCA  668

seq1  TACAGTACTGTGGTGGGAAAAGGATAATGATATCCAAAGTAACAGAAGCT  748
      |||||  | |||||||||||||||||||||||||||||||| ||||||||
seq2  TACAGGGCAGTGGTGGGAAAAGGATAATGATATCCAAAGTACCAGAAGCT  718

seq1  AATGATACACAATGTAACAAAAGATAATGATGCACAAAGTAACAAGACAC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATACACAATGTAACAAAAGATAATGATGCACAAAGTAACAAGACAC  768

seq1  ACAAAGTAACAAAGACAGTGATCTATAAAGTAACAAAAGATAATGATACA  848
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  ACAAAGTAACAAAGACAGTGATTTATAAAGTAACAAAAGATAATGATACA  818

seq1  CAAAGTATCAAAAGATAAGGATGCATGAAGTAACAAAGATGATACACAAA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTATCAAAAGATAAGGATGCATGAAGTAACAAAGATGATACACAAA  868

seq1  GTAACAAAAGACAATGAGACTCAAAACAACCGGAATGAATCAGGATGTAC  948
      |||||||||| ||||||||||||||||||||||||||||||| |||||||
seq2  GTAACAAAAGGCAATGAGACTCAAAACAACCGGAATGAATCACGATGTAC  918

seq1  AGAAAGTTTAAAGGGCTCCAAGTTCCTTTAATGTGAAGAAGGAACGTGAA  998
      ||||||||||||||||||||||||||||||||  | ||||||||||||||
seq2  AGAAAGTTTAAAGGGCTCCAAGTTCCTTTAAT-CGTAGAAGGAACGTGAA  967

seq1  CTTATTTAAAATATGATCAGTATGCCCAGTAACATTCTAGAATGAATTC  1047
       |||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GTTATTTAAAACATGATCAGTATGCCCAGTAACATTCTAGAATGAATTC  1016

seq1: chr8_36112856_36113800
seq2: B6Ng01-069K05.g_68_1016

seq1  GAATTCCACTGATGATCAGTGGAGAATGTGTTTATTAGTTTTTTATTGGC  50
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  GAATTCCACTGATGATCAGTGGAGAATGTGTTTATTACTTTTTTATTGGC  50

seq1  TTGACACAGCCTCTGGGAAGAGAGAACCTCAACTGAGACAATGCTCCCAT  100
      ||||| |  |||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCCTTCCTCTGGGAAGAGAGAACCTCAACTGAGACAATGCTCCCAT  100

seq1  TAGAGTTACCTTTAAACAAATCTATGAGAACATTTCTTGAAGAATGGTTG  150
      ||||||||||||||||| ||||||||| ||| ||||||||||||||| ||
seq2  TAGAGTTACCTTTAAACCAATCTATGATAACCTTTCTTGAAGAATGGGTG  150

seq1  ATATAGAAGCCCAGCCCACTGTGGGGTATTACTGTCTCTGGCAGGTAGTT  200
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  ATATAGAACCCCAGCCCACTGTGGGGTATTACTGTCTCTGGCAGGTAGTT  200

seq1  CAGGGTTCTATAAGAAAGCAGTCTGAGTAAGTCATGGGGAGTAAGCTAAA  250
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CAGGGTTCTATAAGAAAGCATTCTGAGTAAGTCATGGGGAGTAAGCTAAA  250

seq1  AAGCATCATTCGTCCATGGCATCAGCCTTAGTTCCTGCCTCCAGGTTCCT  300
      |||||||||||| ||||||| | | |||||||||||||||||||||||||
seq2  AAGCATCATTCGGCCATGGCCTGA-CCTTAGTTCCTGCCTCCAGGTTCCT  299

seq1  GCCTTGAGTTCTTGCCCTGACTCCTTTCATGGACTGTGAACTTTAAGATG  350
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  GCCTTGAGTTCTTGCCCTGACTCCTTTCATGGACTGTGAACTTTAAAATG  349

seq1  AAATACATGTCTTTGCTCTTGGTCATGATTTTTATCACAGGAATAGAAAG  400
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACATGTCTTTGCTCTTGGTCATGATTTTTATCACAGGAATAGAAAG  399

seq1  CAAACTAGGACAGAGAGATTGAGACCTGAGTCCAGGACAGTCTTCAGTCT  450
      ||||||||||||||||||||||||||||| |||||||||||||||  |||
seq2  CAAACTAGGACAGAGAGATTGAGACCTGACTCCAGGACAGTCTTCGCTCT  449

seq1  CTAGTACTGCACTAATTCTGTGTAGAGAAGGCATATTTGTGTTAACCACA  500
      |||||||||| ||||||||||||| ||||||| |||||||||||||||||
seq2  CTAGTACTGCCCTAATTCTGTGTATAGAAGGCCTATTTGTGTTAACCACA  499

seq1  CAGCAACCATTAATATCTGTTTTATCACAAGATCATAGAATAGGACTGAG  550
      ||||||||||||||||||||||||||||  ||||||| |||| |||||| 
seq2  CAGCAACCATTAATATCTGTTTTATCACCTGATCATACAATACGACTGAT  549

seq1  ATGTACACAGGCTTAATTCAGGGTTTCAATATTTTTATATTCATTCATTC  600
      |||| | || |||||||||| ||||||||| ||||||||| |||||||||
seq2  ATGTTCCCAAGCTTAATTCACGGTTTCAATGTTTTTATATGCATTCATTC  599

seq1  GTTCATTCACTCATTTTTGGTATGTGTGCATTCATGTATGTATGTATGTA  650
       | |||||||||||||| ||||||||||||| ||||||||||||| ||||
seq2  ATACATTCACTCATTTTAGGTATGTGTGCATGCATGTATGTATGTCTGTA  649

seq1  TGTATTTATGCATGCCATGTTGCATATGTGGAGGGCAGAGGACAATCT-G  699
      |||||||||||| ||| || |||  ||||| ||||| ||| ||| ||| |
seq2  TGTATTTATGCACGCCCTGCTGCGGATGTGTAGGGCTGAGCACACTCTGG  699

seq1  GGATATAGGTACTT-GCCTTCCACCTTGCTTGAGACAGTCTCTTTCATGA  748
      |||||||||||||| || ||||||| |||||||||||||||||  |||||
seq2  GGATATAGGTACTTGGCGTTCCACCATGCTTGAGACAGTCTCTGGCATGA  749

seq1  TTACTGTTGCATTTGCA-GGACTAGATTC-CCCCGACTTCGCACTACTAC  796
      ||||||| || ||||||  |||||||| | ||||||| |||||| | |||
seq2  TTACTGTGGCGTTTGCACAGACTAGATACACCCCGACCTCGCACAAATAC  799

seq1  ACTTTGGCACTTTATCTACTGAGGGATCTC-CCTCATTGCTTATTTACTC  845
      |||||||||||||||||||||||||   || | || |||| |||||||||
seq2  ACTTTGGCACTTTATCTACTGAGGGTCTTCTCATCTTTGC-TATTTACTC  848

seq1  TGGAGACAAAGTCTTGTCATATGACCC-TTGCTCCCTGGAACTCTCTGTG  894
      |||||||||| |||||||||||||||| ||||||||||||||||||||||
seq2  TGGAGACAAA-TCTTGTCATATGACCCTTTGCTCCCTGGAACTCTCTGTG  897

seq1  TAGCCCAGGCTGGCCTCAAACCAATTCCCACTG-ATCCTCT-GGCCT-GT  941
      ||||||||||| ||||| ||| ||||||||||| ||||||| ||||| ||
seq2  TAGCCCAGGCT-GCCTC-AACAAATTCCCACTGAATCCTCTGGGCCTGGT  945

seq1  CTAT  945
      ||||
seq2  CTAT  949