BAC Information

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BAC

Clone NameB6Ng01-070E23
Chromosome8 (Build37)
Map Location 112,548,278 - 112,650,982
singlet/doubletdoublet
Overlap geneChst4, Zfp612, Gm1467
Upstream gene4922502B01Rik, Gm1943, LOC100042829, Pmfbp1, Dhx38, Txnl4b, Hp, Dhodh, Pkd1l3, 2400003C14Rik, 4930566A11Rik, D8Ertd587e, LOC668089, LOC672735, Ap1g1, Phlppl, Marveld3, LOC100041884, Tat
Downstream geneCalb2, BC025546, Hydin, LOC672398, Vac14, BC060632, 2010004A03Rik, Sf3b3, Cog4, Fuk, St3gal2, Ddx19a, Ddx19b, Aars, Exosc6, Mrcl, 4930402E16Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-070E23.bB6Ng01-070E23.g
ACCDH888351DH888352
length1,090237
definitionDH888351|Mus musculus domesticus DNA, BAC clone: B6Ng01-070E23, 5' end.DH888352|Mus musculus domesticus DNA, BAC clone: B6Ng01-070E23, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(112,548,278 - 112,549,368)(112,650,746 - 112,650,982)
sequence
gaattccaaatacatacacacacacacacacacacacacacacacacaca
cacacacacacaatgtattttaatcatatccattctttaccccctaattc
ctcttggatctccccgtgtaaccatcccaacttcatcttcactcctaccc
ttcgtctccctgacccactgatgtcacagggtttctctgtgtagtccggg
ctgtcctggaactctctgtagatcaggctgacctcaagctcaaagatctg
cctgccttagcttccctgggattaaaagtgtgcatctttattccaagttc
tctctctctctctctctctctctctctctctttaagaactcgccgagttt
ataattaatgccacccaaatgtttatgggtgtgaagccagtacacagaac
atgtgacttgtcaggacccatagtccagaagaaaactgactttccctccc
caacctactccaccactgactaagaaagggctcaaagcctccagcacggc
ctctccccagttgagacctgcaggctggtagctcattcatttgaatcaga
gtgaaaagatcaagagaagcccctgtggggaaagtttctcagtggctgca
tgcgactttggacagaatgattctgctttggaatcttccctgcttttagt
gtcccactcacgccagcagcactcctacctagctgtgacaactccaaatt
ccccagagagaaatgcacaatcattataagccaactagaaaatactaaaa
catagccaggcatggtggtgcatgcctttaatccaagcatgggggaggca
gagaggcagagaggcagagagaggcagagaggcaaagagagaggcagaga
gagaggcagagagagaggcagagagagaggcagagaggcaaagagagagg
cagagaggcagagagagaggcagagaggcagagaggcagagaggcggaga
ggcagagagagagttggcagaggcaaagcagaggcagaggcaaaggcaga
ggcagatggatatctatgagttcaaggctggtctggtctacaaggtgagt
tccaggacaagcaggcacagagaaatccttgttttaaaaa
cttgccagtgtgacttctctcagcctctggtttcatgagtcactaaagtc
acacgttcctgagatgaagggaggcttcactaaaggcagaaagggaaatc
agatcattgggaaggagccaaaaaccacaggcaaagagagagggagaggg
aaggaagggagggacagaaggaggggcagacagatggacagacagatgaa
cgggcagacggatggatggatggatggatggatggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_112548278_112549368
seq2: B6Ng01-070E23.b_46_1135

seq1  GAATTCCAAATACATACACACACACACACACACACACACACACACACACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAATACATACACACACACACACACACACACACACACACACACA  50

seq1  CACACACACACAATGTATTTTAATCATATCCATTCTTTACCCCCTAATTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACAATGTATTTTAATCATATCCATTCTTTACCCCCTAATTC  100

seq1  CTCTTGGATCTCCCCGTGTAACCATCCCAACTTCATCTTCACTCCTACCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGGATCTCCCCGTGTAACCATCCCAACTTCATCTTCACTCCTACCC  150

seq1  TTCGTCTCCCTGACCCACTGATGTCACAGGGTTTCTCTGTGTAGTCCGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCGTCTCCCTGACCCACTGATGTCACAGGGTTTCTCTGTGTAGTCCGGG  200

seq1  CTGTCCTGGAACTCTCTGTAGATCAGGCTGACCTCAAGCTCAAAGATCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCTGGAACTCTCTGTAGATCAGGCTGACCTCAAGCTCAAAGATCTG  250

seq1  CCTGCCTTAGCTTCCCTGGGATTAAAAGTGTGCATCTTTATTCCAAGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCCTTAGCTTCCCTGGGATTAAAAGTGTGCATCTTTATTCCAAGTTC  300

seq1  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTAAGAACTCGCCGAGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTAAGAACTCGCCGAGTTT  350

seq1  ATAATTAATGCCACCCAAATGTTTATGGGTGTGAAGCCAGTACACAGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATTAATGCCACCCAAATGTTTATGGGTGTGAAGCCAGTACACAGAAC  400

seq1  ATGTGACTTGTCAGGACCCATAGTCCAGAAGAAAACTGACTTTCCCTCCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGACTTGTCAGGACCCATAGTCCAGAAGAAAACTGACTTTCCCTCCC  450

seq1  CAACCTACTCCACCACTGACTAAGAAAGGGCTCAAAGCCTCCAGCACGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTACTCCACCACTGACTAAGAAAGGGCTCAAAGCCTCCAGCACGGC  500

seq1  CTCTCCCCAGTTGAGACCTGCAGGCTGGTAGCTCATTCATTTGAATCAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCCAGTTGAGACCTGCAGGCTGGTAGCTCATTCATTTGAATCAGA  550

seq1  GTGAAAAGATCAAGAGAAGCCCCTGTGGGGAAAGTTTCTCAGTGGCTGCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAAAGATCAAGAGAAGCCCCTGTGGGGAAAGTTTCTCAGTGGCTGCA  600

seq1  TGCGACTTTGGACAGAATGATTCTGCTTTGGAATCTTCCCTGCTTTTAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGACTTTGGACAGAATGATTCTGCTTTGGAATCTTCCCTGCTTTTAGT  650

seq1  GTCCCACTCACGCCAGCAGCACTCCTACCTAGCTGTGACAACTCCAAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCACTCACGCCAGCAGCACTCCTACCTAGCTGTGACAACTCCAAATT  700

seq1  CCCCAGAGAGAAATGCACAATCATTATAAGCCAACTAGAAAATACTAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGAGAGAAATGCACAATCATTATAAGCCAACTAGAAAATACTAAAA  750

seq1  CATAGCCAGGCATGGTGGTGCATGCCTTTAATCCAAGCATGGGGGAGGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGCCAGGCATGGTGGTGCATGCCTTTAATCCAAGCATGGGGGAGGCA  800

seq1  GAGAGGCAGAGAGGCAGAGAGAGGCAGAGAGGCAAAGAGAGAGGCAGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCAGAGAGGCAGAGAGAGGCAGAGAGGCAAAGAGAGAGGCAGAGA  850

seq1  GAGAGGCAGAGAGAGAGGCAGAGAGAGAGGCAGAGAGGCAAAGAGAGAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGCAGAGAGAGAGGCAGAGAGAGAGGCAGAGAGGCAAAGAGAGAGG  900

seq1  CAGAGAGGCAGAGAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGCGGAGA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGGCAGAGAGAGAGGCAGAGAGGCAGAGAGGCAGAGAGGCGGAGA  950

seq1  GGCAGAGAGAGAGGTTGGCAGAGGCAGAGGCAGAGGCAGAGGCAGAGGCA  1000
      |||||||||||| ||||||||||||| | ||||||||||||||| |||||
seq2  GGCAGAGAGAGA-GTTGGCAGAGGCA-AAGCAGAGGCAGAGGCAAAGGCA  998

seq1  GAGGCAGATGGATATCTATGAGTTCAAGGCTGGCCTGGTCTACAAAGTGA  1050
      ||||||||||||||||||||||||||||||||| ||||||||||| ||||
seq2  GAGGCAGATGGATATCTATGAGTTCAAGGCTGGTCTGGTCTACAAGGTGA  1048

seq1  GTTCCAGGACAGCCAGGGCACAGAGAAA-CCCTGTTTAAAAA-  1091
      |||||||||||  || |||||||||||| || ||||| |||| 
seq2  GTTCCAGGACAAGCA-GGCACAGAGAAATCCTTGTTTTAAAAA  1090

seq1: chr8_112650746_112650982
seq2: B6Ng01-070E23.g_75_311 (reverse)

seq1  ATCCATCCATCCATCCATCCATCCATCCGTCTGCCCGTTCATCTGTCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATCCATCCATCCATCCATCCATCCGTCTGCCCGTTCATCTGTCTGT  50

seq1  CCATCTGTCTGCCCCTCCTTCTGTCCCTCCCTTCCTTCCCTCTCCCTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCTGTCTGCCCCTCCTTCTGTCCCTCCCTTCCTTCCCTCTCCCTCTC  100

seq1  TCTTTGCCTGTGGTTTTTGGCTCCTTCCCAATGATCTGATTTCCCTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGCCTGTGGTTTTTGGCTCCTTCCCAATGATCTGATTTCCCTTTCT  150

seq1  GCCTTTAGTGAAGCCTCCCTTCATCTCAGGAACGTGTGACTTTAGTGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTAGTGAAGCCTCCCTTCATCTCAGGAACGTGTGACTTTAGTGACT  200

seq1  CATGAAACCAGAGGCTGAGAGAAGTCACACTGGCAAG  237
      |||||||||||||||||||||||||||||||||||||
seq2  CATGAAACCAGAGGCTGAGAGAAGTCACACTGGCAAG  237