BAC Information

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BAC

Clone NameB6Ng01-072C18
Chromosome8 (Build37)
Map Location 90,334,281 - 90,498,729
singlet/doubletdoublet
Overlap geneZfp423
Upstream geneBC004022, LOC666960, EG625298, EG330819, Cbln1, LOC100040294, 4933402J07Rik
Downstream geneLOC100040328, 5033428A16Rik, Heatr3, Papd5, Adcy7, Brd7, LOC100040369, Nkd1, 9130017C17Rik, Nod2, Cyld, LOC675985
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072C18.bB6Ng01-072C18.g
ACCDH889661DH889662
length1,177846
definitionDH889661|Mus musculus domesticus DNA, BAC clone: B6Ng01-072C18, 5' end.DH889662|Mus musculus domesticus DNA, BAC clone: B6Ng01-072C18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(90,334,281 - 90,335,465)(90,497,882 - 90,498,729)
sequence
gaattccaggacagccaagggctacacggagaaaccctgtttcaaacctc
cagttccaagatttctgacaccctcatacagacatacacacaggcaaaca
ccaaagaatgtaatatacatacatatacatatacacatacacatacacat
acacatacacatacacatacacatacacatatacatatacatatacgtaa
cttagatgtgcccacaaggaagaaatgttaagttgtgggctggaaacagc
acaaaggtaaagtcagcacataaagcaaggatcacctccatggcaggatg
ctcaggcctggccaggagatcaggcacccagagcaggcaggcctcatgct
aggtcttaatttagggcaaaaatataaaagaaaaaataatgaggatcaac
atacgaaagcacagctagcatccaagagacagacactgtccagatagtag
gagacacggatacaatgggtcttcaaccagggcctgcctcccccagtgca
tgaggacatcgagtggcagctaatgtgtccctgacacatcacccacctta
ccagggagggcagcagggttctgagacatgacgtcactctgctagagcct
caaatgcagtcagaggtggagtctgctctgaccacaaggcaggagggagg
cgtgcataagacaagacttccaaactcactgggcagtggacctggtgaga
cgttgggtgaacaaagctaaggccacagcccagagggaagcatctggggt
gctcaggagtgcacagtggcccctggaacagagcacagtagaggaggcaa
ggccttcaatgggatgccttcagtatctcccagtgagggactcggcccta
cctctccattcccatcttgacctcttatggggagaagccccctcaggaga
cagcaagacagccttcccaccacgcaaacagacagacaaacagacagaga
taagacagtgatgagtagctttgtgcagagggtaatgagcagactactgt
cttatatacattcttgcaccagattacatacagtgaaacgaagttgacat
tataacctgtggtgaccctgaagataatacttactttctcgaacttccat
tttccctccttattgtctcattcatgcctataaagcaatactgaattata
cctaatgcctagatatctgtagcaggg
gaattcttggtggagcccactcctccggccctgtggagcgaaccccctcc
cgtgcgctgggtgcggctgggtgtgcgggacatggagcacggagatcgcg
ggtcgagtggggcttgggccctgcacgctggtgtttctgcatccaaccgt
gtttatacaccggggcataattttttgtgcacacacgcagcgacgcttgg
ggaactttcctgaaaatcctgggctggcagtttaaatataaaaaggcttt
gtttaatgccagaacgttttccccctgttctgggagtcgcgaagcattca
cctgcttcctcactcctttaaagactcgggaggccagacttgttttaggg
gtgaagagttagggaggagacccctggatccaagcacaaggttatcttcc
aagtccatgccacagccttctccatctctgtcgttcaaggctatggaagc
ccctaaacctcgccagtcctgcctctctcctggggctgtttaactttgga
tctttcctctgcaaatatctgggagtgttaaaccgatgccaacagcattg
tggctgtggaattcaagttgaaatgtggccaaaaacgtggaaggctgagg
aacagagggctggaggaagctgaaggggagggtgttgtgggcaaggcaag
gtgaccatggagggcagaccctctctcggacttgaccactttaagagagt
acgggtcacagtaacatatgccttttaatcccattactttagcacaggca
gatggatctatgtgagttagaggccagtctggtctacagagagagagttc
agtggaatcaaggctatgcagagaaactgtttttgaaaaacagaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_90334281_90335465
seq2: B6Ng01-072C18.b_45_1221

seq1  GAATTCCAGGACAGCCAAGGGCTACACGGAGAAACCCTGTTTCAAACCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGACAGCCAAGGGCTACACGGAGAAACCCTGTTTCAAACCTC  50

seq1  CAGTTCCAAGATTTCTGACACCCTCATACAGACATACACACAGGCAAACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCAAGATTTCTGACACCCTCATACAGACATACACACAGGCAAACA  100

seq1  CCAAAGAATGTAATATACATACATATACATATACACATACACATACACAT  150
      ||||||||||||||||||||||||||||||      ||||||||||||||
seq2  CCAAAGAATGTAATATACATACATATACAT------ATACACATACACAT  144

seq1  ACACATACACATACACATACACATACACATACACATATACATATACATAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATACACATACACATACACATACACATACACATATACATATACATAT  194

seq1  ACGTAACTTAGATGTGCCCACAAGGAAGAAATGTTAAGTTGTGGGCTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTAACTTAGATGTGCCCACAAGGAAGAAATGTTAAGTTGTGGGCTGGA  244

seq1  AACAGCACAAAGGTAAAGTCAGCACATAAAGCAAGGATCACCTCCATGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCACAAAGGTAAAGTCAGCACATAAAGCAAGGATCACCTCCATGGC  294

seq1  AGGATGCTCAGGCCTGGCCAGGAGATCAGGCACCCAGAGCAGGCAGGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATGCTCAGGCCTGGCCAGGAGATCAGGCACCCAGAGCAGGCAGGCCT  344

seq1  CATGCTAGGTCTTAATTTAGGGCAAAAATATAAAAGAAAAAATAATGAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTAGGTCTTAATTTAGGGCAAAAATATAAAAGAAAAAATAATGAGG  394

seq1  ATCAACATACGAAAGCACAGCTAGCATCCAAGAGACAGACACTGTCCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAACATACGAAAGCACAGCTAGCATCCAAGAGACAGACACTGTCCAGA  444

seq1  TAGTAGGAGACACGGATACAATGGGTCTTCAACCAGGGCCTGCCTCCCCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTAGGAGACACGGATACAATGGGTCTTCAACCAGGGCCTGCCTCCCCC  494

seq1  AGTGCATGAGGACATCGAGTGGCAGCTAATGTGTCCCTGACACATCACCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCATGAGGACATCGAGTGGCAGCTAATGTGTCCCTGACACATCACCC  544

seq1  ACCTTACCAGGGAGGGCAGCAGGGTTCTGAGACATGACGTCACTCTGCTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTACCAGGGAGGGCAGCAGGGTTCTGAGACATGACGTCACTCTGCTA  594

seq1  GAGCCTCAAATGCAGTCAGAGGTGGAGTCTGCTCTGACCACAAGGCAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCTCAAATGCAGTCAGAGGTGGAGTCTGCTCTGACCACAAGGCAGGA  644

seq1  GGGAGGCGTGCATAAGACAAGACTTCCAAACTCACTGGGCAGTGGACCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGGCGTGCATAAGACAAGACTTCCAAACTCACTGGGCAGTGGACCTG  694

seq1  GTGAGACGTTGGGTGAACAAAGCTAAGGCCACAGCCCAGAGGGAAGCATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGACGTTGGGTGAACAAAGCTAAGGCCACAGCCCAGAGGGAAGCATC  744

seq1  TGGGGTGCTCAGGAGTGCACAGTGGCCCCTGGAACAGAGCACAGTAGAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTGCTCAGGAGTGCACAGTGGCCCCTGGAACAGAGCACAGTAGAGG  794

seq1  AGGCAAGGCCTTCAATGGGATGCCTTCAGTATCTCCCAGTGAGGGACTCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAAGGCCTTCAATGGGATGCCTTCAGTATCTCCCAGTGAGGGACTCG  844

seq1  GCCCTACCTCTCCCATTCCCATCTTGACCTCTTATGGGGAGAAAGCCCCC  900
      ||||||||||| |||||||||||||||||||||||||||||||   ||||
seq2  GCCCTACCTCT-CCATTCCCATCTTGACCTCTTATGGGGAGAA--GCCCC  891

seq1  CTCAGGAGACAGCAAGACAGCCTTCCCACCACGCAAACAGACAGACAAAC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGAGACAGCAAGACAGCCTTCCCACCACGCAAACAGACAGACAAAC  941

seq1  AGACAGAGATTAGACAAGTGAAGAGTAGCTTGTGGCAGAGGGTAAGGAGC  1000
      |||||||||| |||| ||||| |||||||||   ||||||||||| ||||
seq2  AGACAGAGATAAGAC-AGTGATGAGTAGCTTTGTGCAGAGGGTAATGAGC  990

seq1  AGACTACTGTCTTATATACATTCTTTGCACCAGAATTACATACAGTGAAA  1050
      ||||||||||||||||||||||| ||||||||| ||||||||||||| ||
seq2  AGACTACTGTCTTATATACATTC-TTGCACCAG-ATTACATACAGTG-AA  1037

seq1  ACGAAGTTGACATTTATAA-CTGT-GTGACCCTGAAGATAATACTTAACT  1098
      |||||||||||| |||||| |||| ||||||||||||||||||||||  |
seq2  ACGAAGTTGACA-TTATAACCTGTGGTGACCCTGAAGATAATACTTACTT  1086

seq1  TCTCCGAACCTCCATTTTCTCTCTTTATTGTCTCATTCATGCC-ATAAAG  1147
      ||| ||||| ||||||||| ||| ||||||||||||||||||| ||||||
seq2  TCT-CGAACTTCCATTTTCCCTCCTTATTGTCTCATTCATGCCTATAAAG  1135

seq1  CAATACAGAATAGTACCT-ATG-CTAGATA-CTG-AGCAGGG  1185
      |||||| ||||  ||||| ||| ||||||| ||| |||||||
seq2  CAATACTGAATTATACCTAATGCCTAGATATCTGTAGCAGGG  1177

seq1: chr8_90497882_90498729
seq2: B6Ng01-072C18.g_69_914 (reverse)

seq1  TCTCTTGTTTTTCAAAAACAGTTTCTCTGCATAGCCTTGGCTGCCCTGGA  50
      |||| ||||||||||||||||||||||||||||||||||  | | || ||
seq2  TCTC-TGTTTTTCAAAAACAGTTTCTCTGCATAGCCTTGATTCCACT-GA  48

seq1  ACTCTCTCTCTGTAGACCAGACTGGCCTCTAACTCACATAGATCCATCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTCTCTCTGTAGACCAGACTGGCCTCTAACTCACATAGATCCATCTG  98

seq1  CCTGTGCCTAAGTAATGGGATT-AAAGGCATATGTTACTGTGACCCGTAC  149
      |||||||  ||||||||||||| |||||||||||||||||||||||||||
seq2  CCTGTGCTAAAGTAATGGGATTAAAAGGCATATGTTACTGTGACCCGTAC  148

seq1  TCTCTTTAAAGTGGTCAAGTCCGAGAGAGGGTCTGCCCTCCATGGTCACC  199
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTC-TTAAAGTGGTCAAGTCCGAGAGAGGGTCTGCCCTCCATGGTCACC  197

seq1  TTGCCTTGCCCACAACACCCTCCCCTTCAGCTTCCTCCAGCCCTCTGTTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCTTGCCCACAACACCCTCCCCTTCAGCTTCCTCCAGCCCTCTGTTC  247

seq1  CTCAGCCTTCCACGTTTTTGGCCACATTTCAACTTGAATTCCACAGCCAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCCTTCCACGTTTTTGGCCACATTTCAACTTGAATTCCACAGCCAC  297

seq1  AATGCTGTTGGCATCGGTTTAACACTCCCAGATATTTGCAGAGGAAAGAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCTGTTGGCATCGGTTTAACACTCCCAGATATTTGCAGAGGAAAGAT  347

seq1  CCAAAGTTAAACAGCCCCAGGAGAGAGGCAGGACTGGCGAGGTTTAGGGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGTTAAACAGCCCCAGGAGAGAGGCAGGACTGGCGAGGTTTAGGGG  397

seq1  CTTCCATAGCCTTGAACGACAGAGATGGAGAAGGCTGTGGCATGGACTTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATAGCCTTGAACGACAGAGATGGAGAAGGCTGTGGCATGGACTTG  447

seq1  GAAGATAACCTTGTGCTTGGATCCAGGGGTCTCCTCCCTAACTCTTCACC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGATAACCTTGTGCTTGGATCCAGGGGTCTCCTCCCTAACTCTTCACC  497

seq1  CCTAAAACAAGTCTGGCCTCCCGAGTCTTTAAAGGAGTGAGGAAGCAGGT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAAACAAGTCTGGCCTCCCGAGTCTTTAAAGGAGTGAGGAAGCAGGT  547

seq1  GAATGCTTCGCGACTCCCAGAACAGGGGGAAAACGTTCTGGCATTAAACA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCTTCGCGACTCCCAGAACAGGGGGAAAACGTTCTGGCATTAAACA  597

seq1  AAGCCTTTTTATATTTAAACTGCCAGCCCAGGATTTTCAGGAAAGTTCCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTTTTTATATTTAAACTGCCAGCCCAGGATTTTCAGGAAAGTTCCC  647

seq1  CAAGCGTCGCTGCGTGTGTGCACAAAAAATTATGCCCCGGTGTATAAACA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCGTCGCTGCGTGTGTGCACAAAAAATTATGCCCCGGTGTATAAACA  697

seq1  CGGTTGGATGCAGAAACACCAGCGTGCAGGGCCCAAGCCCCACTCGACCC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTTGGATGCAGAAACACCAGCGTGCAGGGCCCAAGCCCCACTCGACCC  747

seq1  GCGATCTCCGTGCTCCATGTCCCGCACACCCAGCCGCACCCAGCGCACGG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGATCTCCGTGCTCCATGTCCCGCACACCCAGCCGCACCCAGCGCACGG  797

seq1  GAGGGGGTTCGCTCCACAGGGCCGGAGGAGTGGGCTCCACCAAGAATTC  848
      |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGGTTCGCTCCACAGGGCCGGAGGAGTGGGCTCCACCAAGAATTC  846