BAC Information

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BAC

Clone NameB6Ng01-074K14
Chromosome8 (Build37)
Map Location 114,970,627 - 115,121,339
singlet/doubletdoublet
Overlap geneCntnap4
Upstream geneWdr59, Znrf1, Ldhd, Zfp1, Ctrb1, Bcar1, Cfdp1, Tmem170, Chst5, 4932417I16Rik, Gabarapl2, Adat1, Kars, Terf2ip, EG627828, LOC672498, LOC100042040
Downstream geneLOC100042061
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-074K14.bB6Ng01-074K14.g
ACCDH891442DH891443
length1,205898
definitionDH891442|Mus musculus domesticus DNA, BAC clone: B6Ng01-074K14, 5' end.DH891443|Mus musculus domesticus DNA, BAC clone: B6Ng01-074K14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(115,120,124 - 115,121,339)(114,970,627 - 114,971,522)
sequence
gaattcttctaggaattgcagtcccttatgggcctgaagcttaccaatta
ggtttgactgggttggctagtgagctcccaggaccctgccttcccagtgc
tgggactacaagggtatgccacaatacctggaattttcctgggttctcgg
ggcagaattcagttcctcctgtttgcaaggaaagcatttgccaactgaac
tagtcccccagcccctgttgtctgaacttggaatgagtcattggagcaaa
tacttgaaggcattattttcagtggggcatgatggaggagtgaacaagtc
atgctacataatggccagtggagcgagattttttttttaaacatgcatca
gtcagatgccagacatctctattagaaagttgacctaacttctgaacact
gggcattgttaccaatgaaactgggaaagccagtggttttagagagcacg
tcacaaactgtacagagaaactggtagatacagtctcgccttagtatccc
tggctggctcttagtattaagtgctcccaccaattagtgactccgctatg
agatgagaacgggaacatctccaaaaatgtccccgttgtgagtgtgaccc
ggagatggtacagagtccagctttccagtgtcccaacaagcaactgagcc
tctagaagggacactgcctgtgactatggtacatatgcacgtacacacag
gcacacactatttacacgttcatcatggcttctaggatatggccatacct
ctcactggctttctgtctgcatctcagattctaatgaatttctccactgt
gtggtccctagaacagaggctctggctgcttctccgcccttcgccactca
caagcacgggagtggggtagtctaagcaatctaattgccatccacaaaac
ctggagcgttaattataaactcatcttcagctctacttgctcccatcagc
cctcggtatagatgttccaggactattacagtctgattattgcatttcgg
gtcagcctggcctactccagtttgattaaactaagagttctgtctgcatt
tgctttgctgcgcctctgctgaaacccgcagcatgaatggcctcaagaca
aagaactgttggctgacctcctgggcttaatgtttctctcttggttttta
agcaccccgtaacactctggctcgtaataatatgcatgaaatgctgcggt
gtgtc
gaattccgtgacttccaatggtgtcctatcgtcctatgtggattgaagca
gaaataaactggggtaatttaacgcgtgatggtaagcatcactgaaggct
gcttttagttcttcatccttaggtagacatgagcatcattgagtcggtct
catgtgaagactaaggcctgactgactaccttctttttaccccttccctg
gtagctagaactgatttttatgaacttcacagtgcatttgttttgagcct
gacaaatttatagtgtgccttgggatataaatttaattgactatcatttc
tggctttgtcattagaaaggtcactggagaaatatacacgggagagattc
tgaagtatggagattgtcagctaattggagcttttcatttaaccgagatt
ttattctcaggttccaatttcagtgtgctgtgccaaaggccattgtaaaa
acttgatggagaaataattttctttaaaaaaaaatatatagcatttaatt
gtaagtctaattgtattcaacttaatggtaacgcgaggcctattgtgaac
tgaggccgagtcccctttgcttttctccttggcggccgtggaaccaggaa
gctaccagagttgaatgacattttgcaattatggactgaccacttattat
gcattggatgctaaatacattgccccggctcccgtgcaaagaatgtttaa
atgtgtgcacttttgatgcctgcatttcacatcataggaaagaaagatat
ataatttttcttattgtgattcccccacccccccatagactccctattta
tacttatatataagtgatttcttatttgctctgagggtgacattttcttt
cataattatttcctaaaatttggcaggagtggtgccataattactctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_115120124_115121339
seq2: B6Ng01-074K14.b_44_1248 (reverse)

seq1  GACACACAGGCACAGCATTTCAATGCATTATTTTAATTACTGAGCCAGAG  50
      |||||||   | ||||||||| ||||| ||||   ||||| |||||||||
seq2  GACACAC---CGCAGCATTTC-ATGCA-TATT---ATTAC-GAGCCAGAG  41

seq1  TGTTACGCGGGGTGCTATAAAAACAAG-GAGAACACTTAAGCCCAAGGAG  99
      |||||  |||||||||  |||| |||| |||||   |||||||| |||||
seq2  TGTTA--CGGGGTGCTTAAAAACCAAGAGAGAAACATTAAGCCC-AGGAG  88

seq1  GTCAGCCAACAGGTCTTTGTCTGGAGGCCATTCCATGCTGCGGGTCTCAG  149
      |||||||||||| ||||||||| ||||||||| |||||||||||| ||||
seq2  GTCAGCCAACAGTTCTTTGTCTTGAGGCCATT-CATGCTGCGGGTTTCAG  137

seq1  CAGAGGCGCAGCAAAGCAAATGCAGACAGAACTCTTAGTTTAATCAAACT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGCGCAGCAAAGCAAATGCAGACAGAACTCTTAGTTTAATCAAACT  187

seq1  GGAGTA-GCCAGGCTGACCCGAAATGCAATAATCAGACTGTAATAGTCCT  248
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTAGGCCAGGCTGACCCGAAATGCAATAATCAGACTGTAATAGTCCT  237

seq1  GGAACATCTATACCGAGGGCTGATGGGAGCAAGTAGAGCTGAAGATGAGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACATCTATACCGAGGGCTGATGGGAGCAAGTAGAGCTGAAGATGAGT  287

seq1  TTATAATTAACGCTCCAGGTTTTGTGGATGGCAATTAGATTGCTTAGACT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAATTAACGCTCCAGGTTTTGTGGATGGCAATTAGATTGCTTAGACT  337

seq1  ACCCCACTCCCGTGCTTGTGAGTGGCGAAGGGCGGAGAAGCAGCCAGAGC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCACTCCCGTGCTTGTGAGTGGCGAAGGGCGGAGAAGCAGCCAGAGC  387

seq1  CTCTGTTCTAGGGACCACACAGTGGAGAAATTCATTAGAATCTGAGATGC  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTTCTAGGGACCACACAGTGGAGAAATTCATTAGAATCTGAGATGC  437

seq1  AGACAGAAAGCCAGTGAGAGGTATGGCCATATCCTAGAAGCCATGATGAA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGAAAGCCAGTGAGAGGTATGGCCATATCCTAGAAGCCATGATGAA  487

seq1  CGTGTAAATAGTGTGTGCCTGTGTGTACGTGCATATGTACCATAGTCACA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTAAATAGTGTGTGCCTGTGTGTACGTGCATATGTACCATAGTCACA  537

seq1  GGCAGTGTCCCTTCTAGAGGCTCAGTTGCTTGTTGGGACACTGGAAAGCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGTGTCCCTTCTAGAGGCTCAGTTGCTTGTTGGGACACTGGAAAGCT  587

seq1  GGACTCTGTACCATCTCCGGGTCACACTCACAACGGGGACATTTTTGGAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTCTGTACCATCTCCGGGTCACACTCACAACGGGGACATTTTTGGAG  637

seq1  ATGTTCCCGTTCTCATCTCATAGCGGAGTCACTAATTGGTGGGAGCACTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCCCGTTCTCATCTCATAGCGGAGTCACTAATTGGTGGGAGCACTT  687

seq1  AATACTAAGAGCCAGCCAGGGATACTAAGGCGAGACTGTATCTACCAGTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACTAAGAGCCAGCCAGGGATACTAAGGCGAGACTGTATCTACCAGTT  737

seq1  TCTCTGTACAGTTTGTGACGTGCTCTCTAAAACCACTGGCTTTCCCAGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGTACAGTTTGTGACGTGCTCTCTAAAACCACTGGCTTTCCCAGTT  787

seq1  TCATTGGTAACAATGCCCAGTGTTCAGAAGTTAGGTCAACTTTCTAATAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGGTAACAATGCCCAGTGTTCAGAAGTTAGGTCAACTTTCTAATAG  837

seq1  AGATGTCTGGCATCTGACTGATGCATGTTTAAAAAAAAAATCTCGCTCCA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTCTGGCATCTGACTGATGCATGTTTAAAAAAAAAATCTCGCTCCA  887

seq1  CTGGCCATTATGTAGCATGACTTGTTCACTCCTCCATCATGCCCCACTGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCATTATGTAGCATGACTTGTTCACTCCTCCATCATGCCCCACTGA  937

seq1  AAATAATGCCTTCAAGTATTTGCTCCAATGACTCATTCCAAGTTCAGACA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATGCCTTCAAGTATTTGCTCCAATGACTCATTCCAAGTTCAGACA  987

seq1  ACAGGGGCTGGGGGACTAGTTCAGTTGGCAAATGCTTTCCTTGCAAACAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGGCTGGGGGACTAGTTCAGTTGGCAAATGCTTTCCTTGCAAACAG  1037

seq1  GAGGAACTGAATTCTGCCCCGAGAACCCAGGAAAATTCCAGGTATTGTGG  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAACTGAATTCTGCCCCGAGAACCCAGGAAAATTCCAGGTATTGTGG  1087

seq1  CATACCCTTGTAGTCCCAGCACTGGGAAGGCAGGGTCCTGGGAGCTCACT  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACCCTTGTAGTCCCAGCACTGGGAAGGCAGGGTCCTGGGAGCTCACT  1137

seq1  AGCCAACCCAGTCAAACCTAATTGGTAAGCTTCAGGCCCATAAGGGACTG  1198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCAACCCAGTCAAACCTAATTGGTAAGCTTCAGGCCCATAAGGGACTG  1187

seq1  CAATTCCTAGAAGAATTC  1216
      ||||||||||||||||||
seq2  CAATTCCTAGAAGAATTC  1205

seq1: chr8_114970627_114971522
seq2: B6Ng01-074K14.g_70_967

seq1  GAATTCCGTGACTTCCAATGGTGTCCTATCGTCCTATGTGGATTGAAGCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCGTGACTTCCAATGGTGTCCTATCGTCCTATGTGGATTGAAGCA  50

seq1  GAAATAAACTGGGGTAATTTAACGCGTGATGGTAAGCATCACTGAAGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAAACTGGGGTAATTTAACGCGTGATGGTAAGCATCACTGAAGGCT  100

seq1  GCTTTTAGTTCTTCATCCTTAGGTAGACATGAGCATCATTGAGTCGGTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTAGTTCTTCATCCTTAGGTAGACATGAGCATCATTGAGTCGGTCT  150

seq1  CATGTGAAGACTAAGGCCTGACTGACTACCTTCTTTTTACCCCTTCCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTGAAGACTAAGGCCTGACTGACTACCTTCTTTTTACCCCTTCCCTG  200

seq1  GTAGCTAGAACTGATTTTTATGAACTTCACAGTGCATTTGTTTTGAGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTAGAACTGATTTTTATGAACTTCACAGTGCATTTGTTTTGAGCCT  250

seq1  GACAAATTTATAGTGTGCCTTGGGATATAAATTTAATTGACTATCATTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATTTATAGTGTGCCTTGGGATATAAATTTAATTGACTATCATTTC  300

seq1  TGGCTTTGTCATTAGAAAGGTCACTGGAGAAATATACACGGGAGAGATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTGTCATTAGAAAGGTCACTGGAGAAATATACACGGGAGAGATTC  350

seq1  TGAAGTATGGAGATTGTCAGCTAATTGGAGCTTTTCATTTAACCGAGATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTATGGAGATTGTCAGCTAATTGGAGCTTTTCATTTAACCGAGATT  400

seq1  TTATTCTCAGGTTCCAATTTCAGTGTGCTGTGCCAAAGGCCATTGTAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCTCAGGTTCCAATTTCAGTGTGCTGTGCCAAAGGCCATTGTAAAA  450

seq1  ACTTGATGGAGAAATAATTTTCTTTAAAAAAAAATATATAGCATTTAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGATGGAGAAATAATTTTCTTTAAAAAAAAATATATAGCATTTAATT  500

seq1  GTAAGTCTAATTGTATTCAACTTAATGGTAACGCGAGGCCTATTGTGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAGTCTAATTGTATTCAACTTAATGGTAACGCGAGGCCTATTGTGAAC  550

seq1  TGAGGCCGAGTCCCCTTTGCTTTTCTCCTTGGCGGCCGTGGAACCAGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGCCGAGTCCCCTTTGCTTTTCTCCTTGGCGGCCGTGGAACCAGGAA  600

seq1  GCTACCAGAGTTGAATGACA-TTTGCAATTATGGACTGACCACTTATTAT  649
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GCTACCAGAGTTGAATGACATTTTGCAATTATGGACTGACCACTTATTAT  650

seq1  GCATTGGATGCTAAATACATTGCCCCGGCTCCCGTGCAAAGAATGTTTAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTGGATGCTAAATACATTGCCCCGGCTCCCGTGCAAAGAATGTTTAA  700

seq1  ATGTGTGCAC-TTTGATGCCTGCATTTCACATCATAGGAAAGAAAGATAT  748
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGCACTTTTGATGCCTGCATTTCACATCATAGGAAAGAAAGATAT  750

seq1  ATAATTTT--CTAATGTGATTCCCCCACCCCCCCATAGACTCCCTATTTA  796
      ||||||||   || ||||||||||||||||||||||||||||||||||||
seq2  ATAATTTTTCTTATTGTGATTCCCCCACCCCCCCATAGACTCCCTATTTA  800

seq1  TACTTATATATTAAGTGATTTC-TATTTGCTCTGAGGGTGACATTTTCTT  845
      |||||||||| ||||||||||| |||||||||||||||||||||||||||
seq2  TACTTATATA-TAAGTGATTTCTTATTTGCTCTGAGGGTGACATTTTCTT  849

seq1  TCATAATTATTTCCTAAAATTTGGGCAGGAGTGTTGTCTATATTTACTCT  895
      |||||||||||||||||||||| |||||||||| || | ||| |||||||
seq2  TCATAATTATTTCCTAAAATTT-GGCAGGAGTGGTG-CCATAATTACTCT  897

seq1  T  896
      |
seq2  T  898