BAC Information

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BAC

Clone NameB6Ng01-075D10
Chromosome8 (Build37)
Map Location 59,419,215 - 59,420,379
singlet/doubletsinglet
Overlap genenone
Upstream geneGlra3, LOC664812, Hpgd, LOC664948, BC088983, Fbxo8, LOC100040431, EG624433
Downstream geneLOC654355, LOC100040515, Hand2, Scrg1, Sap30, Hmgb2, LOC547012, Galnt7, LOC100040634, LOC100040711
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075D10.bB6Ng01-075D10.g
ACCDH891833DH891834
length1,1501,178
definitionDH891833|Mus musculus domesticus DNA, BAC clone: B6Ng01-075D10, 5' end.DH891834|Mus musculus domesticus DNA, BAC clone: B6Ng01-075D10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccagattaaacttcatttttaatgtttcaaatcaaagaatgaaac
ttcttaagggatttacaacatttactagatgaagtgtgttcattttctgc
tgataggatgggggaggaacaaatgagcccctacctgtaactgaagcact
actaacagttgatagttgttaacagatgaagaatcaggttttttaaaatc
ttcattttaaggatagagtccccggtagattgaccatgctctaggggatg
catatatagatggcaataattggatttagtggattatgaataagcaaatt
aaaacaaaatcgaggacataatgttagaaaactaatggagtcttcaagga
ataatcaaaggggaagtgggatacacatgataaaaaatgtatatgcatgt
atgaaattctcagaataaatcttaaatgttatttaaaaaataactatcta
actcaaacctcagttaacttatgagatagaacatagtctcaaaaatattt
tctgttttgaattttattatttaacaatggcatgtgcctagtattatgtt
atgaagaagttttagagatatgtgagtgtcaccatagacatgcttcacac
aaaaagaccattgcaggagggccacacttacagggatttgggccattgac
tctagacacatgtatctcaatataacattctttcttaccaacaaatgata
agatagaattccaatcaaaccagcataagccatcatatatagttcagaag
aaatactgaagtcacgtcattttatgaccagatgaagaaagataaatatt
taattaaaaagtctcatttgttggcttttcttggaggaaaattgaatttt
ttaaataaggttttagaactgttctaagcactctagaactttccttgtat
tgcctatactagttagtctaaatttcatttaaacctcatgtttcaacaat
gatactgaggccatgtctaccagaaaccaggtcagttacctgcatatgtt
gtcttctctgcctctgttctcaggcctatccctcagtctgtccctggtcc
tagctctggaataggagcaccactggagtttccctcctccctattctaca
ccttgtttgttccccggatattctaacctgacctcacaccacaccatcat

gaattcatttagatcacctccatgtacatcgatatagttttaaaattttt
ctcctgtatcagttgactatacccctcaaatggtccttagttttagctgt
gtctcctgatattttctcccccaccccttcttttctctcctccatacttg
ttcctaagccatttcattaatttagataagactttgtcagtcattaatgg
ttatcagagaaccaactctgtttcactaattctttttattgttccttttc
tatcttattgattttagccttgaatttgattacttcttgcaatctactat
tcttgggtataatgtcttgtttcatttttagagcttttaggtgtgttgtt
aagttacaagtatgagacctctgcatttttaaaactttaggtacttagag
ttctatggagttgccttttagacccacaccttcatgtgtcccatagcttt
aggtatgttgagtgaaaattctagaaaattttaatttcttcccaaatttc
ttttttaacttatttttcattcaataatgagtgcttcaatttccatgaat
ttgtaagctttcagttgtttccgttgttatagatatgcaactatactcta
tgatggtcagatatgatgcacactattatgtcagttttcttttatctgtt
gccatttgctttggttctgaaaatgttaattttgaggaaaatattatggg
ttctgaaaagcagatgtattcttttgagtttagatgaaaagttctctaaa
tatttgttaggtccatatcatttataatgtcagcatcagaatttctctgt
ttagatttttgtctagatgaactgtctttggcaagagttggatattgaag
tctctcactgatatgatgtgagagccaataggtgatataaattatagtag
tgtttctttttatgaacttgggtgcccttgggtttgtgtcatagatgcta
aggatttaaatgccatctaatattttttcatttgatgagtatgtagtatc
tttatcactctgatttgttcagtttgagcctattttgtcaattactaaat
agctacatcatttgctctagtcatttctggaataacaatttttcacatta
ccctgaggtgaatattaattctgacttgatggtttcttggagtagcaaga
gatggatctgtgttaccatcaatcctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_59419215_59420379
seq2: B6Ng01-075D10.b_48_1197

seq1  GAATTCCAGATTAAACTTCATTTTTAATGTTTCAAATCAAAGAATGAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGATTAAACTTCATTTTTAATGTTTCAAATCAAAGAATGAAAC  50

seq1  TTCTTAAGGGATTTACAACATTTACTAGATGAAGTGTGTTCATTTTCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTAAGGGATTTACAACATTTACTAGATGAAGTGTGTTCATTTTCTGC  100

seq1  TGATAGGATGGGGGAGGAACAAATGAGCCCCTACCTGTAACTGAAGCACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGGATGGGGGAGGAACAAATGAGCCCCTACCTGTAACTGAAGCACT  150

seq1  ACTAACAGTTGATAGTTGTTAACAGATGAAGAATCAGGTTTTTTAAAATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAACAGTTGATAGTTGTTAACAGATGAAGAATCAGGTTTTTTAAAATC  200

seq1  TTCATTTTAAGGATAGAGTCCCCGGTAGATTGACCATGCTCTAGGGGATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTTAAGGATAGAGTCCCCGGTAGATTGACCATGCTCTAGGGGATG  250

seq1  CATATATAGATGGCAATAATTGGATTTAGTGGATTATGAATAAGCAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATAGATGGCAATAATTGGATTTAGTGGATTATGAATAAGCAAATT  300

seq1  AAAACAAAATCGAGGACATAATGTTAGAAAACTAATGGAGTCTTCAAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAATCGAGGACATAATGTTAGAAAACTAATGGAGTCTTCAAGGA  350

seq1  ATAATCAAAGGGGAAGTGGGATACACATGATAAAAAATGTATATGCATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCAAAGGGGAAGTGGGATACACATGATAAAAAATGTATATGCATGT  400

seq1  ATGAAATTCTCAGAATAAATCTTAAATGTTATTTAAAAAATAACTATCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATTCTCAGAATAAATCTTAAATGTTATTTAAAAAATAACTATCTA  450

seq1  ACTCAAACCTCAGTTAACTTATGAGATAGAACATAGTCTCAAAAATATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAAACCTCAGTTAACTTATGAGATAGAACATAGTCTCAAAAATATTT  500

seq1  TCTGTTTTGAATTTTATTATTTAACAATGGCATGTGCCTAGTATTATGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTTTGAATTTTATTATTTAACAATGGCATGTGCCTAGTATTATGTT  550

seq1  ATGAAGAAGTTTTAGAGATATGTGAGTGTCACCATAGACATGCTTCACAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGAAGTTTTAGAGATATGTGAGTGTCACCATAGACATGCTTCACAC  600

seq1  AAAAAGACCATTGCAGGAGGGCCACACTTACAGGGATTTGGGCCATTGAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGACCATTGCAGGAGGGCCACACTTACAGGGATTTGGGCCATTGAC  650

seq1  TCTAGACACATGTATCTCAATATAACATTCTTTCTTACCAACAAATGATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGACACATGTATCTCAATATAACATTCTTTCTTACCAACAAATGATA  700

seq1  AGATAGAATTCCAATCAAACCAGCATAAGCCATCATATATAGTTCAGAAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGAATTCCAATCAAACCAGCATAAGCCATCATATATAGTTCAGAAG  750

seq1  AAATACTGAAGTCACGTCATTTTATGACCAGATGAAGAAAGATAAATATT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTGAAGTCACGTCATTTTATGACCAGATGAAGAAAGATAAATATT  800

seq1  TAATTAAAAAGTCTCATTTGTTGGCTTTTCTTGGAGGAAAAATTGAATTT  850
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TAATTAAAAAGTCTCATTTGTTGGCTTTTCTTGGAGG-AAAATTGAATTT  849

seq1  TTTAAATAAGGTTTTAGAACTGTTCTAAGCACTCTAGAACTTTCCTTGTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATAAGGTTTTAGAACTGTTCTAAGCACTCTAGAACTTTCCTTGTA  899

seq1  TTGCCTATACTAGTTAGTCTAAATTTCATTTAAAACCTCATGTTTCAAAC  950
      ||||||||||||||||||||||||||||||| |||||||||||||| |||
seq2  TTGCCTATACTAGTTAGTCTAAATTTCATTT-AAACCTCATGTTTC-AAC  947

seq1  AATGATACTGAGGCCATGTCTACCAGAAAACCAGGTCAGTTACCTGCATA  1000
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  AATGATACTGAGGCCATGTCTACCAG-AAACCAGGTCAGTTACCTGCATA  996

seq1  TGTTGTCTTCTCTGCCTCTGTTCCTCAGGCCTAATCACTCAGTCTTGTCC  1050
      |||||||||||||||||||||| ||||||||| ||| ||||||| |||||
seq2  TGTTGTCTTCTCTGCCTCTGTT-CTCAGGCCT-ATCCCTCAGTC-TGTCC  1043

seq1  CTGGTTCCCTAGCTCTGGAATA-GAGCACCAACTGGAGTTTCCCTTCCTC  1099
      |||||  ||||||||||||||| ||||||| ||||||||||||| |||||
seq2  CTGGT--CCTAGCTCTGGAATAGGAGCACC-ACTGGAGTTTCCC-TCCTC  1089

seq1  CCTA-TCTACAACCTGTTTGGTTCCCACAGATTATTCTACCCTGACCTCA  1148
      |||| |||||| | ||||| |||||| | || ||||||| ||||||||||
seq2  CCTATTCTACACCTTGTTT-GTTCCC-CGGA-TATTCTAACCTGACCTCA  1136

seq1  CAACCACAACTCATCAT  1165
      | ||||||   ||||||
seq2  C-ACCACA--CCATCAT  1150