BAC Information

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BAC

Clone NameB6Ng01-078L05
Chromosome8 (Build37)
Map Location 56,197,508 - 56,197,903
singlet/doubletsinglet
Overlap geneLOC100040382
Upstream geneVegfc, Spcs3, Asb5, Spata4, Wdr17, Gpm6a, LOC667624, LOC100040156
Downstream geneLOC100040392, EG546212
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-078L05.bB6Ng01-078L05.g
ACCDH894328DH894329
length391967
definitionDH894328|Mus musculus domesticus DNA, BAC clone: B6Ng01-078L05, 5' end.DH894329|Mus musculus domesticus DNA, BAC clone: B6Ng01-078L05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
catctacaaccctgaaatgcaaaggtgtggctgtgcacctggttctatgc
acctgtgtggacttccattggctacaaggttgtgggaagaagcagcaaga
ggcttgcagcaaacaggtgcctccaataagttttcctacaaaggaaagga
ctttgccctaaggaggttcagtgggtgaagttcacatggctgggtggcca
ttttacagtatgaggaaatgtatgaggagaacagataccatcctgtttcg
tttgttggtttacttagttggttttggttttggtgttggtgttggttgtg
gttttgcttttggttgtttgattgatttatttcatttacatagatagata
gattgatagatagagagatatgtaatttttttccatcaggt
gaattccttgtttagctctgtacctcattttatttttaatgggcttattt
aattttctggagtccatcttcttgagtttttttttttttttttgtatata
ttggatgttagtctgctatcaaatttaggataggtaaaaattctttccca
atctgttggtggccttttgtctaattgactgtgtcttttgccttacagaa
gctttgcaattttatgaggtcccatttgtcaattctcgatcttacagcac
aagccattgctgttctgttcaggaattttccccctgtgcccatatcttca
aggcttttcccccactttctcctctataagtttcagtgtctctggtttta
tatggagtttttgatacacttagacttgagctttgtacaaggagataaga
atggattaattcttctacataataactgccagttgtgccagcaccatttg
ttgaaaatgctgtcttttttccatttgatggttttttctcccttgtcaaa
gattaagtgaccataggtgtgtgagttcctttctgggtcttcagttctat
tcgattgattaacctgtctgttactgtaccagtaccatgcagtttttatc
acaattgttctgtagtacagcttgaggttaggcatggtgtttccaccaga
agttctggttttttttgttgttgttgttgtttttgtttttgtttttgttt
ttgttttttttttttggttttcgaaacagggtttctctatagttctggct
gtccgggaactcactttgtagaccaggctgcctcgaaatcagaatccacc
tgcctctacctcccaagtgctgggataaagcttgcgccacatcccagcgg
ttctgttatttttgagaacagtttttgctttttaggtttttgtattccag
atgattttgcaaattgcccttctactaggtggtgagatgagttggaattt
tgatgtgggtgcatgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_56197508_56197903
seq2: B6Ng01-078L05.b_46_442

seq1  GAATCCCATCTACAACCCTGAAATGCAAAGGTGTGTCTGTGCACCTGGTT  50
      |||| |||||||||||||||||||||||||||||| ||||||||||||||
seq2  GAATTCCATCTACAACCCTGAAATGCAAAGGTGTGGCTGTGCACCTGGTT  50

seq1  CTATGAACCTGTGTGGACTTCCATTGGCTACAAGGTTGTGGGAAGAAGCA  100
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGCACCTGTGTGGACTTCCATTGGCTACAAGGTTGTGGGAAGAAGCA  100

seq1  GCAAGAGGCTTGCAGCAAACAGGTGCCTCCAATAAGTTTTCCTACAAA-G  149
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GCAAGAGGCTTGCAGCAAACAGGTGCCTCCAATAAGTTTTCCTACAAAGG  150

seq1  AAAGGACTTTGCCCTAAGGAGGTTCAGTGGGTGGAGGTCACATGGCTGGG  199
      ||||||||||||||||||||||||||||||||| || |||||||||||||
seq2  AAAGGACTTTGCCCTAAGGAGGTTCAGTGGGTGAAGTTCACATGGCTGGG  200

seq1  TGGCCATTTTGCAGTATGAGGAAATGTATGAGGAGAACAGATTCCATCCT  249
      |||||||||| ||||||||||||||||||||||||||||||| |||||||
seq2  TGGCCATTTTACAGTATGAGGAAATGTATGAGGAGAACAGATACCATCCT  250

seq1  GTTTTGTTTGTTGGTTTACTTAGTTGGTTTTGGTGTTGGTGTTGGTGTTG  299
      |||| ||||||||||||||||||||||||||||| |||||||||||||||
seq2  GTTTCGTTTGTTGGTTTACTTAGTTGGTTTTGGTTTTGGTGTTGGTGTTG  300

seq1  GTTGTGGTTTTGCTTTTGGTTGTTTGATTGATTGATTTCATTTACATAGA  349
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GTTGTGGTTTTGCTTTTGGTTGTTTGATTGATTTATTTCATTTACATAGA  350

seq1  TAGATAGATTGATAGATAGAGAGATATGTAAATTTTTTCCATCAGGT  396
      ||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TAGATAGATTGATAGATAGAGAGATATGTAATTTTTTTCCATCAGGT  397