BAC Information

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BAC

Clone NameB6Ng01-081O09
Chromosome8 (Build37)
Map Location 122,841,614 - 123,032,468
singlet/doubletdoublet
Overlap geneGse1
Upstream geneCdh13, Hsbp1, Mlycd, Osgin1, Efcbp2, Gm587, Mbtps1, Hsdl1, Lrrc50, Taf1c, EG628061, 4930403J07Rik, Kcng4, Wfdc1, Atp2c2, 4632415K11Rik, Cotl1, BC025816, Usp10, Crispld2, Zdhhc7, 6430548M08Rik, 1700120B06Rik
Downstream gene4833427B12Rik, LOC668301, 1190005I06Rik, Cox4nb, Cox4i1, Irf8, LOC100042333, Foxf1a, Mthfsd, Foxc2, Foxl1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081O09.bB6Ng01-081O09.g
ACCDH896612DH896613
length1,043551
definitionDH896612|Mus musculus domesticus DNA, BAC clone: B6Ng01-081O09, 5' end.DH896613|Mus musculus domesticus DNA, BAC clone: B6Ng01-081O09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(123,031,431 - 123,032,468)(122,841,614 - 122,842,170)
sequence
gaattcatttcacctagtggaccaagaggcctgaggcttagggaggggca
ggcccaggtctgaatcccacctctatgattgccatgcacaaggcagtcag
cccttcttggactctgctctttgcagatgaaagctggtaacagtgaccat
gcacgcacgcacctgtcgcactggagcgaagggtgtggccagagaaaaac
cggtccatatgggttccagagaagcctatcactggggagacggtctaact
ttccatcctgcactaaagcaacaaagctgtccatctgtcatctatctgtt
tgccataaaactccggagaggcctagccagcagcgaccctggggccactt
cccaggtgagactaggattccatggtagagacgcctccaccgaccccagc
agcctgttgaccagggacaggctgggagaaggcagccttaccaagaacca
taggcccatcactgcctctgattctagagaacaaaggcctcagcctccac
tgccaggctactgagctgaggaaaagcgcgagagaggtggacacacagct
gtagcatcctggggcccagatgccgcacagcatcctcagacccagcacag
cacctgcagacccaacatagcagcccagacctaggcacagcatccagacc
ccgcacagaatccaggccccacccactacccctagatctagcacagcacc
cccagactctgtgcagcacccccggactgcacaacaccaaaccatcctgt
tcacaggcagggtggaggtcagcccaggtagtaatccactagcaacagct
gacgtgttgtagaccagccttggagagccccactggagatgcaaggagcc
agaggcgtcaataacctgagttctgggccttcatcaccttggcttctccc
tgaatcctctggctacgggtaggaagaaatctaattctcagtcaggcaga
aggtttgaccatctgtgcagaactattccttgggaaacagtgacccttag
cctctgtcctatgcttaggtccttgccagtggcctgggtctct
ctgggaacagcggaagacctcagaatgggcagtctctggaagccatggct
ctgggaacacatgtttacctgatatccacagatgcgcccacacttgtgcc
tgcaatgggggcctgcacccagaggtaatggtgaggatggcttagagggc
cgtctgtcgatgccgagggcatgggggagacactccaaaggaggtgctga
ggcacactcatcttctcttttgtcctgttggttcctatggggacagtgat
gtctaactgacatcagtctctacctctctgttaccatcaatggcatggag
acacactttgtcagctagattgccttcccagaatccatcctaggtcaggg
cagagagtccccaggaatgtgattacccttttatcctgtgacccagggcc
tggttttcagaccctgttgcatgaacctaagattcaggatgcaggaccat
tccctgcctgccttcccgtctggtctgttgggccaagcccaccaggaccc
tgtgcagacctcagagctctgtggctcccagtctggggaggtgggagggg
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_123031431_123032468
seq2: B6Ng01-081O09.b_46_1088 (reverse)

seq1  AGAGACCCAGG-CACTGGC-AGGACCTAAGCATAGGACAGAGGCTAAGGG  48
      ||||||||||| ||||||| ||||||||||||||||||||||||||||||
seq2  AGAGACCCAGGCCACTGGCAAGGACCTAAGCATAGGACAGAGGCTAAGGG  50

seq1  TCACTGTTTCCC-AGGAATAGTTCTGCACAGATGGTCAA--CCTCTGCCT  95
      |||||||||||| ||||||||||||||||||||||||||  | |||||||
seq2  TCACTGTTTCCCAAGGAATAGTTCTGCACAGATGGTCAAACCTTCTGCCT  100

seq1  GACTTGAGAACTAGATTTCTTCCTACCCGTAGCCAGAGGATTCAGGGAGA  145
      ||| |||||| |||||||||||||||||||||||||||||||||||||||
seq2  GAC-TGAGAATTAGATTTCTTCCTACCCGTAGCCAGAGGATTCAGGGAGA  149

seq1  AGCCAAGGTTGATGAAGG-CCAGAACTCAGGTTATTGACGCCTCTGGCTC  194
      |||||||| ||||||||| |||||||||||||||||||||||||||||||
seq2  AGCCAAGG-TGATGAAGGCCCAGAACTCAGGTTATTGACGCCTCTGGCTC  198

seq1  CTTGCATCTCCAGTGGGGCTCTCC-AGGCTGGTCTACAACACGTCAGCTG  243
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  CTTGCATCTCCAGTGGGGCTCTCCAAGGCTGGTCTACAACACGTCAGCTG  248

seq1  TTGCTAGTGGATTACTACCTGGGCTGACCTCCACCCTGCCTGTGAACAGG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAGTGGATTACTACCTGGGCTGACCTCCACCCTGCCTGTGAACAGG  298

seq1  ATGGTTTGGTGTTGTGCAGTCCGGGGGTGCTGCACAGAGTCTGGGGGTGC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTTTGGTGTTGTGCAGTCCGGGGGTGCTGCACAGAGTCTGGGGGTGC  348

seq1  TGTGCTAGATCTAGGGGTAGTGGGTGGGGCCTGGATTCTGTGCGGGGTCT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTAGATCTAGGGGTAGTGGGTGGGGCCTGGATTCTGTGCGGGGTCT  398

seq1  GGATGCTGTGCCTAGGTCTGGGCTGCTATGTTGGGTCTGCAGGTGCTGTG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATGCTGTGCCTAGGTCTGGGCTGCTATGTTGGGTCTGCAGGTGCTGTG  448

seq1  CTGGGTCTGAGGATGCTGTGCGGCATCTGGGCCCCAGGATGCTACAGCTG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTCTGAGGATGCTGTGCGGCATCTGGGCCCCAGGATGCTACAGCTG  498

seq1  TGTGTCCACCTCTCTCGCGCTTTTCCTCAGCTCAGTAGCCTGGCAGTGGA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCCACCTCTCTCGCGCTTTTCCTCAGCTCAGTAGCCTGGCAGTGGA  548

seq1  GGCTGAGGCCTTTGTTCTCTAGAATCAGAGGCAGTGATGGGCCTATGGTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGAGGCCTTTGTTCTCTAGAATCAGAGGCAGTGATGGGCCTATGGTT  598

seq1  CTTGGTAAGGCTGCCTTCTCCCAGCCTGTCCCTGGTCAACAGGCTGCTGG  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGTAAGGCTGCCTTCTCCCAGCCTGTCCCTGGTCAACAGGCTGCTGG  648

seq1  GGTCGGTGGAGGCGTCTCTACCATGGAATCCTAGTCTCACCTGGGAAGTG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCGGTGGAGGCGTCTCTACCATGGAATCCTAGTCTCACCTGGGAAGTG  698

seq1  GCCCCAGGGTCGCTGCTGGCTAGGCCTCTCCGGAGTTTTATGGCAAACAG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCAGGGTCGCTGCTGGCTAGGCCTCTCCGGAGTTTTATGGCAAACAG  748

seq1  ATAGATGACAGATGGACAGCTTTGTTGCTTTAGTGCAGGATGGAAAGTTA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGACAGATGGACAGCTTTGTTGCTTTAGTGCAGGATGGAAAGTTA  798

seq1  GACCGTCTCCCCAGTGATAGGCTTCTCTGGAACCCATATGGACCGGTTTT  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCGTCTCCCCAGTGATAGGCTTCTCTGGAACCCATATGGACCGGTTTT  848

seq1  TCTCTGGCCACACCCTTCGCTCCAGTGCGACAGGTGCGTGCGTGCATGGT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTGGCCACACCCTTCGCTCCAGTGCGACAGGTGCGTGCGTGCATGGT  898

seq1  CACTGTTACCAGCTTTCATCTGCAAAGAGCAGAGTCCAAGAAGGGCTGAC  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGTTACCAGCTTTCATCTGCAAAGAGCAGAGTCCAAGAAGGGCTGAC  948

seq1  TGCCTTGTGCATGGCAATCATAGAGGTGGGATTCAGACCTGGGCCTGCCC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGTGCATGGCAATCATAGAGGTGGGATTCAGACCTGGGCCTGCCC  998

seq1  CTCCCTAAGCCTCAGGCCTCTTGGTCCACTAGGTGAAATGAATTC  1038
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTAAGCCTCAGGCCTCTTGGTCCACTAGGTGAAATGAATTC  1043

seq1: chr8_122841614_122842170
seq2: B6Ng01-081O09.g_70_626

seq1  GAATTCCTGGGAACAGCGGAAGACCTCAGAATGGGCAGTCTCTGGAAGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGGGAACAGCGGAAGACCTCAGAATGGGCAGTCTCTGGAAGCC  50

seq1  ATGGCTCTGGGAACACATGTTTACCTGATATCCACAGATGCGCCCACACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCTGGGAACACATGTTTACCTGATATCCACAGATGCGCCCACACT  100

seq1  TGTGCCTGCAATGGGGGCCTGCACCCAGAGGTAATGGTGAGGATGGCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCCTGCAATGGGGGCCTGCACCCAGAGGTAATGGTGAGGATGGCTTA  150

seq1  GAGGGCCGTCTGTCGATGCCGAGGGCATGGGGGAGACACTCCAAAGGAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCCGTCTGTCGATGCCGAGGGCATGGGGGAGACACTCCAAAGGAGG  200

seq1  TGCTGAGGCACACTCATCTTCTCTTTTGTCCTGTTGGTTCCTATGGGGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGGCACACTCATCTTCTCTTTTGTCCTGTTGGTTCCTATGGGGAC  250

seq1  AGTGATGTCTAACTGACATCAGTCTCTACCTCTCTGTTACCATCAATGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGTCTAACTGACATCAGTCTCTACCTCTCTGTTACCATCAATGGC  300

seq1  ATGGAGACACACTTTGTCAGCTAGATTGCCTTCCCAGAATCCATCCTAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGACACACTTTGTCAGCTAGATTGCCTTCCCAGAATCCATCCTAGG  350

seq1  TCAGGGCAGAGAGTCCCCAGGAATGTGATTACCCTTTTATCCTGTGACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGCAGAGAGTCCCCAGGAATGTGATTACCCTTTTATCCTGTGACCC  400

seq1  AGGGCCTGGTTTTCAGACCCTGTTGCATGAACCTAAGATTCAGGATGCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCCTGGTTTTCAGACCCTGTTGCATGAACCTAAGATTCAGGATGCAG  450

seq1  GACCATTCCCTGCCTGCCTTCCCGTCTGGTCTGTTGGGCCAAGCCCACCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCATTCCCTGCCTGCCTTCCCGTCTGGTCTGTTGGGCCAAGCCCACCA  500

seq1  GGACCCTGTGCAGACCTCAGAGCTCTGTGGCTCCCAGTCTGGGGAGGTGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCCTGTGCAGACCTCAGAGCTCTGTGGCTCCCAGTCTGGGGAGGTGG  550

seq1  GAGGGGT  557
      |||||||
seq2  GAGGGGT  557