BAC Information

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BAC

Clone NameB6Ng01-081P04
Chromosome8 (Build37)
Map Location 24,593,217 - 24,594,160
singlet/doubletsinglet
Overlap genenone
Upstream geneSlc20a2, LOC100040803, Vdac3, Dkk4, Polb, Ikbkb, Plat, Ap3m2, Myst3, LOC100042253, Ank1, Nkx6-3, Agpat6, Gins4, Golga7, Sfrp1
Downstream geneLOC100040931, Zmat4, 1810011O10Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081P04.bB6Ng01-081P04.g
ACCDH896650DH896651
length1,0691,003
definitionDH896650|Mus musculus domesticus DNA, BAC clone: B6Ng01-081P04, 5' end.DH896651|Mus musculus domesticus DNA, BAC clone: B6Ng01-081P04, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaagaaaggaaattcaaacggcaaagaaacccttaaaggaatg
ttccacatccttagtcatgagggaaatgcaaatcaaaactactttgagat
ttcatcttgcaccaatcagaatgactaagatcaataaaataaatgacagc
tcgggctggcgagcacttgaagtaagcggaacactcatccattgatggtg
gagctaaacttgtgcagacactacagaaatcagtgtggccatccctcggg
aagctaggaattgatctatctacctctagacccagctctaccactcttgg
ccataaactcaaaggatgcttcttcaccttacaatagagacacttgctca
gccctgtacactgctgctctatttgtaagagccagaaattggaaacatcc
aagatgtccctcaaccaaagagtggataaagaaaatgaggtacatttata
caatagaatattactcagcctttttcagaatgaaatttgcaggtgaatgg
atggaaacagagaaaagaaacatcatcctgtatgaggtaaccccgaccca
tgaagacaaatatggtatgcatttgcttatatatggatatgagctattta
gtcaacgatgaccaagctacaatctatagaaccacagaggttagggatag
agtaagggaattggactgtcaagctggctcagcgggtaagagcactgact
gctcttccgaaggtcctgagctcaaaacccagcaattacatggtggctca
caaccacccgtaatgagatctgatgccctcttctggtgtgtctgaaggca
gctacagtgtacttatttataataaaaataagtctttttaaaaaatagag
taagggaaactgggtcagatgagggacagagagacatcccaaggaatgag
aagtagagcaagtagttgtgggtgggtaagaaagacctggactgagaaat
caaaagttggggagaggagaacatggaaagctatggggagaggtggctaa
attaaaggccattgagagcatatggaagcttaatacgtaaagctagtcat
cttaccaaatccctactaa
gaattcagctttgaaagactgcaactccctcagtgggaggggctccgagg
agagggcaacagagttatagaggttgtacaatagccaagttcagaaatgt
tgaccttttagaaaatgatgagagcttgtccttggggctgcggattgaaa
gctgacaagctttgggttccaagaaatgaaaaccatgctacagatgaccc
aggcagaatcaaatgtgtgggcaagaggcaaaccgaaggttgccgctctc
gggtaagctgttccttgggagtctggttagctttgtttctatcttttcaa
aagtttcattttatcctatctagagtgtggtgtagggcaagtgggccagg
ccaccagacagaagaactggactctaggaatcttcgagacttgatattgg
caagagtctatatccgtgtctatacctgctctggaacatgtaaccaagac
actccactgagaggaccatgggcagtcatttaatgcatgaagtccatcct
tccccatgtaaatagagcatcactagcttctcaaattgtgccaataggaa
acacctaccctaaatcccaccccactcaccaatgtttatatagtccctgt
ccgtatgaaataaagcacacaagttatttcactgaggatcatctgagagt
ggctatctttactgagctttaacacttggggaagagttctttctcccaaa
gcattcacctctggatcttggacccacctggctggccaggtgtggtggtt
ttaatatggttggtccagggcgtggcactattagtaggtgtggccttgtt
ggagtaggtgtggccttgctagaggaagtgtgtcactgtgggggagggct
ttgagactcctcctcctaagccacataggagtcagtcttctcctagcagt
ctttggacaagaggtagagctctcagcatctccagcgccagccacaatga
taatggactgaacctctgaacctgtaagtcagtcccaattaaatgatgtc
ctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_24593217_24594160
seq2: B6Ng01-081P04.g_70_1015

seq1  GAATTCAGC-GTGAAAGACTGCAACTCCCTCAGTGGGAGGGGCTCCGAGG  49
      |||||||||  |||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTTTGAAAGACTGCAACTCCCTCAGTGGGAGGGGCTCCGAGG  50

seq1  AGAGGGCAACAGAGTTATAGAGGTTGTACAATAGCCAAGTTCAGAAATGT  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGCAACAGAGTTATAGAGGTTGTACAATAGCCAAGTTCAGAAATGT  100

seq1  TGACCTTTTAGAAAATGATGAGAGCTTGTCCTTGGGGCTGCGGATTGAAA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCTTTTAGAAAATGATGAGAGCTTGTCCTTGGGGCTGCGGATTGAAA  150

seq1  GCTGACAAGCTTTGGGTTCCAAGAAATGAAAACCATGCTACAGATGACCC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGACAAGCTTTGGGTTCCAAGAAATGAAAACCATGCTACAGATGACCC  200

seq1  AGGCAGAATCAAATGTGTGGGCAAGAGGCAAACCGAAGGTTGCCGCTCTC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGAATCAAATGTGTGGGCAAGAGGCAAACCGAAGGTTGCCGCTCTC  250

seq1  GGGTAAGCTGTTCCTTGGGAGTCTGGTTAGCTTTGTTTCTATCTTTTCAA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAAGCTGTTCCTTGGGAGTCTGGTTAGCTTTGTTTCTATCTTTTCAA  300

seq1  AAGTTTCATTTTATCCTATCTAGAGTGTGGTGTAGGGCAAGTGGGCCAGG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCATTTTATCCTATCTAGAGTGTGGTGTAGGGCAAGTGGGCCAGG  350

seq1  CCACCAGACAGAAGAACTGGACTCTAGGAATCTTCGAGACTTGATATTGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCAGACAGAAGAACTGGACTCTAGGAATCTTCGAGACTTGATATTGG  400

seq1  CAAGAGTCTATATCCGTGTCTATACCTGCTCTGGAACATGTAACCAAGAC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTCTATATCCGTGTCTATACCTGCTCTGGAACATGTAACCAAGAC  450

seq1  ACTCCACTGAGAGGACCATGGGCAGTCATTTAATGCATGAAGTCCATCCT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCACTGAGAGGACCATGGGCAGTCATTTAATGCATGAAGTCCATCCT  500

seq1  TCCCCATGTAAATAGAGCATCACTAGCTTCTCAAATTGTGCCAATAGGAA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCATGTAAATAGAGCATCACTAGCTTCTCAAATTGTGCCAATAGGAA  550

seq1  ACACCTACCCTAAATCCCACCCCACTCACCAATGTTTATATAGTCCCTGT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCTACCCTAAATCCCACCCCACTCACCAATGTTTATATAGTCCCTGT  600

seq1  CCGTATGAAATAAAGCACACAAGTTATTTCACTGAGGATCATCTGAGAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTATGAAATAAAGCACACAAGTTATTTCACTGAGGATCATCTGAGAGT  650

seq1  GGCTATCTTTACTGAGCTTTAACACTTGGGGAAGAGTTCTTTCTCCCAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATCTTTACTGAGCTTTAACACTTGGGGAAGAGTTCTTTCTCCCAAA  700

seq1  GCATTCACCTCTGGATCTTGGACCCACCTGGCTGGCCAGGTGTGGTGGTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATTCACCTCTGGATCTTGGACCCACCTGGCTGGCCAGGTGTGGTGGTT  750

seq1  TTAATATGGTTGGTCCAGGGCGTGGCACTATTAGTAGGTGTGGCCTTGTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATGGTTGGTCCAGGGCGTGGCACTATTAGTAGGTGTGGCCTTGTT  800

seq1  GGAGTAGGTGTGGCCTTGCTAGAGGAAGTGTGTCACTGTGGGGGAGGGCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTAGGTGTGGCCTTGCTAGAGGAAGTGTGTCACTGTGGGGGAGGGCT  850

seq1  TTGAGAC-CCTCCTCCT-AGCCACATAGGAGTCAGTCTTCTCCTAGCAGT  897
      ||||||| ||||||||| ||||||||||||||||||||||||||||||||
seq2  TTGAGACTCCTCCTCCTAAGCCACATAGGAGTCAGTCTTCTCCTAGCAGT  900

seq1  CTTTGGAACAAGAGGTAGAGCTCTCAGCATCTCCAGCGCCAGCCACA  944
      |||||| ||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGG-ACAAGAGGTAGAGCTCTCAGCATCTCCAGCGCCAGCCACA  946