BAC Information

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BAC

Clone NameB6Ng01-084P17
Chromosome8 (Build37)
Map Location 84,078,206 - 84,243,301
singlet/doubletdoublet
Overlap geneInpp4b
Upstream geneFrem3, Smarca5, Gab1, LOC666237, LOC100039496, LOC234501, LOC100039518, Usp38, EG70793, LOC236010, LOC384852
Downstream geneLOC671182, Il15, EG666564
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-084P17.bB6Ng01-084P17.g
ACCDH898780DH898781
length1,0851,130
definitionDH898780|Mus musculus domesticus DNA, BAC clone: B6Ng01-084P17, 5' end.DH898781|Mus musculus domesticus DNA, BAC clone: B6Ng01-084P17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(84,078,206 - 84,079,307)(84,242,170 - 84,243,301)
sequence
gaattcccatcagaattccaacacaattctttacagaccttgaaagaaca
atactcaacttcacgtggaagaacaggaacctgttttgaggacattgcag
agatagggctctcatttgaaaggagaccaacctagtcttttgtgccattc
agtttctactcctgagccaccactgatgttctggaatgtgtgctactgcc
tgcatccctttcctaccctgctttggtctaacagtcttttctgtctgatt
ctttctcttctccatttctattgtagaagttctttaattccacactgggg
tttctaccctgccttagatcatttaagtttcaggataaacacacacacat
atactcaggctttatatttacaataagccttcaacaacacatgactaggc
agatacttagcctctatgctgttagaatctacttttctattgataactcc
aagatattatttattacttactgtgtttcatctgggctgctctttttttt
tttaaatttgggatgtcatctatattttatttttctaaattttcatttta
aaatatgctatgtacaatcttaaaataagtcatggtgggtatgactcttt
caggagatctggttaggccatcctctgctatatgcaactagaggcacagt
tctggggtgtactggttagttcatattgtcattcctcctatagggttggt
gacccctttagtctttgggtactttctctagctccttatttaggggcctg
ttgttccatccaatagatgactgtgagcatacacttctgtatttcccagg
tactggcatagcctcacaaaagagagctatatcacgctcttgtaagaaaa
atcttgctggaatatgcaatagtgtctgggtttcgtggttgtatatggga
tggatcccagatggggcagtcccccacccgctccccaccactccccaccc
accactccacttctggccctgcattccctgtactagtcagaaaaagtgca
cgaccaatggcctctctttccacagaatgctgactagcatcttctgaaac
atatgcagctaagaaacgagctctggggggactgg
gaattcctcactccagtaatgcaggtgtcaggatgggagcaaatcacgag
ttttctcgtggttcactctcatggaagggaaaaataagatgatacagaag
agagagaaaaggaagagagcatgtcacttggctttcatagactctgttga
gctcaatttctactgatgtcaaacacagaacactttctgaaaactaaaca
aatattaaagtagtgaaataataatctcatggggcacctagcgctgctcc
atgaatttcctgtttaataggaatttaaaagatttgtatgtcaaaaaatt
tggagacaaataaaaggaggaagggagaaagagtgagagggaaagagaaa
aagaataaggaaggcagtaggaagagaggattctaaatgaaatcaaagac
aaatggccaaggatgtggactatccatgaatgtcagcaaagtgactggta
caatggaagcagcatataggtgtgatctcatctaatggcagcattcactg
gaagctcggataattcctgccattatgtgaggcatggtttttaacccaaa
gaatagcataagtggacttatttgttctgtgatactgtgaactgacagtg
tcactcaatgaaccaaacactgagcacctactgagtaagcctcaaagtgc
catgtgcaattcagcaacatgctgccttgactataagtggagcttacagc
cagggtggaagaatctataacattataacaccaccaagagccagtttgaa
tgaaaagatcaatgaatctgcctttgagtctgcctgtgttggacacaatc
gataagcagtctccatgctttcaatggagacactctgtgctagatatcac
ggtacatgtccacaaagctagcatcctttctggtttggcttcctgctgtt
tcctttctagtgctcactaatatacatctagcttgcgtacgaagcaccag
ccagtatgtaattggagacaccaggcccaaatagaaattgtactgaaact
gaatttagaaattctaagattaagatgatgggtgcgacatgttagagaaa
gtttaagagaattccaggcagcacagaagatggaggagtccaattgttat
cgagacttccgaacggaagaccacattctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_84078206_84079307
seq2: B6Ng01-084P17.b_48_1132

seq1  GAATTCCCATCAGAATTCCAACACAATTCTTTACAGACCTTGAAAGAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCATCAGAATTCCAACACAATTCTTTACAGACCTTGAAAGAACA  50

seq1  ATACTCAACTTCACGTGGAAGAACAGGAACCTGTTTTGAGGACATTGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCAACTTCACGTGGAAGAACAGGAACCTGTTTTGAGGACATTGCAG  100

seq1  AGATAGGGCTCTCATTTGAAAGGAGACCAACCTAGTCTTTTGTGCCATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGGGCTCTCATTTGAAAGGAGACCAACCTAGTCTTTTGTGCCATTC  150

seq1  AGTTTCTACTCCTGAGCCACCACTGATGTTCTGGAATGTGTGCTACTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCTACTCCTGAGCCACCACTGATGTTCTGGAATGTGTGCTACTGCC  200

seq1  TGCATCCCTTTCCTACCCTGCTTTGGTCTAACAGTCTTTTCTGTCTGATT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATCCCTTTCCTACCCTGCTTTGGTCTAACAGTCTTTTCTGTCTGATT  250

seq1  CTTTCTCTTCTCCATTTCTATTGTAGAAGTTCTTTAATTCCACACTGGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTTCTCCATTTCTATTGTAGAAGTTCTTTAATTCCACACTGGGG  300

seq1  TTTCTACCCTGCCTTAGATCATTTAAGTTTCAGGATAAACACACACACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTACCCTGCCTTAGATCATTTAAGTTTCAGGATAAACACACACACAT  350

seq1  ATACTCAGGCTTTATATTTACAATAAGCCTTCAACAACACATGACTAGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCAGGCTTTATATTTACAATAAGCCTTCAACAACACATGACTAGGC  400

seq1  AGATACTTAGCCTCTATGCTGTTAGAATCTACTTTTCTATTGATAACTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACTTAGCCTCTATGCTGTTAGAATCTACTTTTCTATTGATAACTCC  450

seq1  AAGATATTATTTATTACTTACTGTGTTTCATCTGGGCTGCTCTTTTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATATTATTTATTACTTACTGTGTTTCATCTGGGCTGCTCTTTTTTTT  500

seq1  TTTAAATTTGGGATGTCATCTATATTTTATTTTTCTAAATTTTCATTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTTGGGATGTCATCTATATTTTATTTTTCTAAATTTTCATTTTA  550

seq1  AAATATGCTATGTACAATCTTAAAATAAGTCATGGTGGGTATGACTCTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATATGCTATGTACAATCTTAAAATAAGTCATGGTGGGTATGACTCTTT  600

seq1  CAGGAGATCTGGTTAGGCCATCCTCTGCTATATGCAACTAGAGGCACAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGATCTGGTTAGGCCATCCTCTGCTATATGCAACTAGAGGCACAGT  650

seq1  TCTGGGGTGTACTGGTTAGTTCATATTGTCATTCCTCCTATAGGGTTGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGGGTGTACTGGTTAGTTCATATTGTCATTCCTCCTATAGGGTTGGT  700

seq1  GACCCCTTTAGTCTTTGGGTACTTTCTCTAGCTCCTTATTTAGGGGCCTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCCCTTTAGTCTTTGGGTACTTTCTCTAGCTCCTTATTTAGGGGCCTG  750

seq1  TTGTTCCATCCAATAGATGACTGTGAGCATACACTTCTGTATTTCCCAGG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTCCATCCAATAGATGACTGTGAGCATACACTTCTGTATTTCCCAGG  800

seq1  TACTGGCATAGCCTCACAAAAGAGAGCTATATCAGGCTCTTGTAAGAAAA  850
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TACTGGCATAGCCTCACAAAAGAGAGCTATATCACGCTCTTGTAAGAAAA  850

seq1  ATCTTGCTGGAATATGCAATAGTGTCTGGGTTTCGTGGTTGTATATGGGA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTGCTGGAATATGCAATAGTGTCTGGGTTTCGTGGTTGTATATGGGA  900

seq1  TGGATCCCCAGATGGGGCAGTCCCCCACCCGCTCCCCCACCCACTCCCCC  950
      ||||| |||||||||||||||||||||||||||||||   ||||| ||||
seq2  TGGAT-CCCAGATGGGGCAGTCCCCCACCCGCTCCCC--ACCACT-CCCC  946

seq1  ACCCACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTAAGTCAG  1000
      ||||| ||||| ||||||| ||||||| ||||| ||||||||| ||||||
seq2  ACCCA-CCACT-CCACTTC-TGGCCCT-GCATT-CCCTGTACT-AGTCAG  990

seq1  ATAAAGTTTGCACGACCAATGGGCCTCTCTTTCCACAGATGGCTGACTAG  1050
      | ||||  |||||||||||| ||||||||||||||||||  |||||||||
seq2  AAAAAG--TGCACGACCAAT-GGCCTCTCTTTCCACAGAATGCTGACTAG  1037

seq1  GCCATCTTCTGATACATATGCAGCTAAAGACACGAGCTCTGGGGGGTACT  1100
        |||||||||| |||||||||||| |||| ||||||||||||||| |||
seq2  --CATCTTCTGAAACATATGCAGCT-AAGAAACGAGCTCTGGGGGG-ACT  1083

seq1  GG  1102
      ||
seq2  GG  1085

seq1: chr8_84242170_84243301
seq2: B6Ng01-084P17.g_68_1197 (reverse)

seq1  AAGAATAGTGGTCTTCCGTTCTGAAGTCTCGGATACACATCGACTCCCTC  50
      |||||| |||||||||||||| |||||||||   |||  | |||| ||||
seq2  AAGAAT-GTGGTCTTCCGTTCGGAAGTCTCGATAACAATTGGACT-CCTC  48

seq1  CCTC-TCTGTGCTGCCCTGGATTCTCTTTAACTATTCTCT-ACATGTCGC  98
      | || |||||||||||  | |||||||| |||| |||||| |||||||||
seq2  CATCTTCTGTGCTGCCTGGAATTCTCTTAAACT-TTCTCTAACATGTCGC  97

seq1  ACCCATCATCTTTATCTTTAGATTTTCTAATTTCAGTTTTCAGTACAATT  148
      |||||||||||| ||| ||||| ||||||| ||||| |||||||||||||
seq2  ACCCATCATCTTAATC-TTAGAATTTCTAAATTCAG-TTTCAGTACAATT  145

seq1  TCTATTT-GGCCTGGTGTCTCCAATTACATACTGGCTGGTGCTTCGTACG  197
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATTTGGGCCTGGTGTCTCCAATTACATACTGGCTGGTGCTTCGTACG  195

seq1  CAAGCTAGATGTATATTAGTGAGCACTAGAAAGGAAACAGCAGGAAGCCA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTAGATGTATATTAGTGAGCACTAGAAAGGAAACAGCAGGAAGCCA  245

seq1  AACCAGAAAGGATGCTAGCTTTGTGGACATGTACCGTGATATCTAGCACA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAGAAAGGATGCTAGCTTTGTGGACATGTACCGTGATATCTAGCACA  295

seq1  GAGTGTCTCCATTGAAAGCATGGAGACTGCTTATCGATTGTGTCCAACAC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTCTCCATTGAAAGCATGGAGACTGCTTATCGATTGTGTCCAACAC  345

seq1  AGGCAGACTCAAAGGCAGATTCATTGATCTTTTCATTCAAACTGGCTCTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCAGACTCAAAGGCAGATTCATTGATCTTTTCATTCAAACTGGCTCTT  395

seq1  GGTGGTGTTATAATGTTATAGATTCTTCCACCCTGGCTGTAAGCTCCACT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTGTTATAATGTTATAGATTCTTCCACCCTGGCTGTAAGCTCCACT  445

seq1  TATAGTCAAGGCAGCATGTTGCTGAATTGCACATGGCACTTTGAGGCTTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTCAAGGCAGCATGTTGCTGAATTGCACATGGCACTTTGAGGCTTA  495

seq1  CTCAGTAGGTGCTCAGTGTTTGGTTCATTGAGTGACACTGTCAGTTCACA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTAGGTGCTCAGTGTTTGGTTCATTGAGTGACACTGTCAGTTCACA  545

seq1  GTATCACAGAACAAATAAGTCCACTTATGCTATTCTTTGGGTTAAAAACC  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCACAGAACAAATAAGTCCACTTATGCTATTCTTTGGGTTAAAAACC  595

seq1  ATGCCTCACATAATGGCAGGAATTATCCGAGCTTCCAGTGAATGCTGCCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCTCACATAATGGCAGGAATTATCCGAGCTTCCAGTGAATGCTGCCA  645

seq1  TTAGATGAGATCACACCTATATGCTGCTTCCATTGTACCAGTCACTTTGC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATGAGATCACACCTATATGCTGCTTCCATTGTACCAGTCACTTTGC  695

seq1  TGACATTCATGGATAGTCCACATCCTTGGCCATTTGTCTTTGATTTCATT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTCATGGATAGTCCACATCCTTGGCCATTTGTCTTTGATTTCATT  745

seq1  TAGAATCCTCTCTTCCTACTGCCTTCCTTATTCTTTTTCTCTTTCCCTCT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAATCCTCTCTTCCTACTGCCTTCCTTATTCTTTTTCTCTTTCCCTCT  795

seq1  CACTCTTTCTCCCTTCCTCCTTTTATTTGTCTCCAAATTTTTTGACATAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCTTTCTCCCTTCCTCCTTTTATTTGTCTCCAAATTTTTTGACATAC  845

seq1  AAATCTTTTAAATTCCTATTAAACAGGAAATTCATGGAGCAGCGCTAGGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTTAAATTCCTATTAAACAGGAAATTCATGGAGCAGCGCTAGGT  895

seq1  GCCCCATGAGATTATTATTTCACTACTTTAATATTTGTTTAGTTTTCAGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCATGAGATTATTATTTCACTACTTTAATATTTGTTTAGTTTTCAGA  945

seq1  AAGTGTTCTGTGTTTGACATCAGTAGAAATTGAGCTCAACAGAGTCTATG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTTCTGTGTTTGACATCAGTAGAAATTGAGCTCAACAGAGTCTATG  995

seq1  AAAGCCAAGTGACATGCTCTCTTCCTTTTCTCTCTCTTCTGTATCATCTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCAAGTGACATGCTCTCTTCCTTTTCTCTCTCTTCTGTATCATCTT  1045

seq1  ATTTTTCCCTTCCATGAGAGTGAACCACGAGAAAACTCGTGATTTGCTCC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCCCTTCCATGAGAGTGAACCACGAGAAAACTCGTGATTTGCTCC  1095

seq1  CATCCTGACACCTGCATTACTGGAGTGAGGAATTC  1132
      |||||||||||||||||||||||||||||||||||
seq2  CATCCTGACACCTGCATTACTGGAGTGAGGAATTC  1130