BAC Information

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BAC

Clone NameB6Ng01-087D16
Chromosome8 (Build37)
Map Location 50,806,095 - 50,807,283
singlet/doubletsinglet
Overlap genenone
Upstream gene2900073C17Rik, LOC100039866, 4930555F03Rik
Downstream geneLOC100039919, EG667495, LOC100039954, LOC100039966
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087D16.bB6Ng01-087D16.g
ACCDH900415DH900416
length1,181821
definitionDH900415|Mus musculus domesticus DNA, BAC clone: B6Ng01-087D16, 5' end.DH900416|Mus musculus domesticus DNA, BAC clone: B6Ng01-087D16, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgagcccaattaactctccccttatgccattgctttttggtatt
tggtcattgcatcagtcagtgtactttgagacaagcccttctgaaataag
aaatattatggactccaatcattcttctgtaaattttatacactgaaaag
tagaagattctaatagtatgtcaggaaccagcaaagtatgatgtgaatct
tgtgtatgtgacctgagaagaggcacagtcatttaacaaatgccttgttc
agtcacttcatacacacgagaacttagcatgtttgtggatgcttataaaa
catgaatcaaaaataataattcctccacaaaatcttcatagcatattcat
tacaaaaaaattgctttgatatgatcaaagtccctcacagggtatgagag
gaataagttgattccaacccaggatggtacctctaaatctatactacaag
tcttctttaagccattctgataatatagatgctactaacaaaaagaagtg
gctggatgattttaatataggtctcatccaggtgctactgagatgctgtt
tgccacaaggttggatgaattataatgcttgaatgtgaatttacttaatc
tgtatcacagaatataaaggccaataatcttaacttcctcctttctgctt
gatatttttctttctctcctccttggaggagcaattcctttaacatacaa
agaagttaattttcagtgggcgctactgaagcgatatgaaaagccattta
atagaagagagacagttgttcagtcaagttgaaagaagactggattcttg
caattgcataaaggactgtgtatggtgctatttgttaaagtaagttgaat
agatagtacttaaattacatataaatgtgtgttgttttgaactgtttatg
tcagtaaagtaaatctaatgacacaaacataataataccttaactgcttt
ttataaccagtttactatatttatcgctggtggaacacagctagtgttat
ctgcactcacagtaattttcaatcacaacctcaaatagttaaagctaaga
gaaatcaacatgtactgcattttattacataccacaaggcaatagctctc
tgttatgatcacaactgccagctactctatccaggattttttctctcaaa
ataatgcagagagtgtgagaataaacctcta

gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtgagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctgggc
atatatccagaagaagccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaaactggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagagcatcatcctgagtgaggtaatacaatcacaaa
ggaactcacacaatatgtactcactgataagtggatactagcccaaaacc
taggatacccacgatataagatacaatttcctaaacacatgaaactcaag
aaaatgaagactgaagtgtggacactatgcccctccttagaagtggggaa
caatacacccatgggaaggagttacataaacaaagttttggaagctgaga
tgaaaggatggaccatgtagagactgccatatccaggggatccaccccct
taatcggcttccaaacgcgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_50806095_50807283
seq2: B6Ng01-087D16.b_45_1225 (reverse)

seq1  TAGA-GTTTA-TCTCACACTTCTCTGCATTTAATTTATGAAGAGAAAAAT  48
      |||| ||||| |||||||| ||||||||||  |||| || ||||||||| 
seq2  TAGAGGTTTATTCTCACAC-TCTCTGCATT--ATTT-TG-AGAGAAAAAA  45

seq1  TCCTGGGATAGAGTAAGCTGGCAGTTGTGATCATTAACAGAGAGCTATTG  98
      |||| ||||||||| |||||||||||||||||| ||||||||||||||||
seq2  TCCT-GGATAGAGT-AGCTGGCAGTTGTGATCA-TAACAGAGAGCTATTG  92

seq1  CCTGTGGGTATGTAATAAAATGCAGTACATGTTGATTTCTCTTAGCTTTA  148
      |||   ||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGTGGTATGTAATAAAATGCAGTACATGTTGATTTCTCTTAGCTTTA  142

seq1  ACTATTTTGAGGTTGTGATTGAAAATTACTGTGGAGTTGCAGATAACACT  198
      |||| ||||||||||||||||||||||||||| ||| |||||||||||||
seq2  ACTA-TTTGAGGTTGTGATTGAAAATTACTGT-GAG-TGCAGATAACACT  189

seq1  AGCTGTGTTCCACCAGCGATAAATATAGTAAACTGGTTAT-AAAAGCAGT  247
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGCTGTGTTCCACCAGCGATAAATATAGTAAACTGGTTATAAAAAGCAGT  239

seq1  TAAGGTATTATTATGTTTGTGTCATTAGATTTACTTTACTGACATAAACA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGTATTATTATGTTTGTGTCATTAGATTTACTTTACTGACATAAACA  289

seq1  GTTCAAAACAACACACATTTATATGTAATTTAAGTACTATCTATTCAACT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAAACAACACACATTTATATGTAATTTAAGTACTATCTATTCAACT  339

seq1  TACTTTAACAAATAGCACCATACACAGTCCTTTATGCAATTGCAAGAATC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAACAAATAGCACCATACACAGTCCTTTATGCAATTGCAAGAATC  389

seq1  CAGTCTTCTTTCAACTTGACTGAACAACTGTCTCTCTTCTATTAAATGGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCTTCTTTCAACTTGACTGAACAACTGTCTCTCTTCTATTAAATGGC  439

seq1  TTTTCATATCGCTTCAGTAGCGCCCACTGAAAATTAACTTCTTTGTATGT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATATCGCTTCAGTAGCGCCCACTGAAAATTAACTTCTTTGTATGT  489

seq1  TAAAGGAATTGCTCCTCCAAGGAGGAGAGAAAGAAAAATATCAAGCAGAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGAATTGCTCCTCCAAGGAGGAGAGAAAGAAAAATATCAAGCAGAA  539

seq1  AGGAGGAAGTTAAGATTATTGGCCTTTATATTCTGTGATACAGATTAAGT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGAAGTTAAGATTATTGGCCTTTATATTCTGTGATACAGATTAAGT  589

seq1  AAATTCACATTCAAGCATTATAATTCATCCAACCTTGTGGCAAACAGCAT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTCACATTCAAGCATTATAATTCATCCAACCTTGTGGCAAACAGCAT  639

seq1  CTCAGTAGCACCTGGATGAGACCTATATTAAAATCATCCAGCCACTTCTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTAGCACCTGGATGAGACCTATATTAAAATCATCCAGCCACTTCTT  689

seq1  TTTGTTAGTAGCATCTATATTATCAGAATGGCTTAAAGAAGACTTGTAGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTAGTAGCATCTATATTATCAGAATGGCTTAAAGAAGACTTGTAGT  739

seq1  ATAGATTTAGAGGTACCATCCTGGGTTGGAATCAACTTATTCCTCTCATA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATTTAGAGGTACCATCCTGGGTTGGAATCAACTTATTCCTCTCATA  789

seq1  CCCTGTGAGGGACTTTGATCATATCAAAGCAATTTTTTTGTAATGAATAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGAGGGACTTTGATCATATCAAAGCAATTTTTTTGTAATGAATAT  839

seq1  GCTATGAAGATTTTGTGGAGGAATTATTATTTTTGATTCATGTTTTATAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATGAAGATTTTGTGGAGGAATTATTATTTTTGATTCATGTTTTATAA  889

seq1  GCATCCACAAACATGCTAAGTTCTCGTGTGTATGAAGTGACTGAACAAGG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCCACAAACATGCTAAGTTCTCGTGTGTATGAAGTGACTGAACAAGG  939

seq1  CATTTGTTAAATGACTGTGCCTCTTCTCAGGTCACATACACAAGATTCAC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGTTAAATGACTGTGCCTCTTCTCAGGTCACATACACAAGATTCAC  989

seq1  ATCATACTTTGCTGGTTCCTGACATACTATTAGAATCTTCTACTTTTCAG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATACTTTGCTGGTTCCTGACATACTATTAGAATCTTCTACTTTTCAG  1039

seq1  TGTATAAAATTTACAGAAGAATGATTGGAGTCCATAATATTTCTTATTTC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAAAATTTACAGAAGAATGATTGGAGTCCATAATATTTCTTATTTC  1089

seq1  AGAAGGGCTTGTCTCAAAGTACACTGACTGATGCAATGACCAAATACCAA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGGCTTGTCTCAAAGTACACTGACTGATGCAATGACCAAATACCAA  1139

seq1  AAAGCAATGGCATAAGGGGAGAGTTAATTGGGCTCAGAATTC  1189
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAATGGCATAAGGGGAGAGTTAATTGGGCTCAGAATTC  1181


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