BAC Information

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BAC

Clone NameB6Ng01-087N05
Chromosome8 (Build37)
Map Location 119,260,505 - 119,408,947
singlet/doubletdoublet
Overlap geneLOC100043053
Upstream geneLOC384868, LOC668233, Dynlrb2, Cdyl2
Downstream gene2310061C15Rik, 2610510J17Rik, BC060631, 1700030J22Rik, Gcsh, Pkd1l2, Bcmo1, Gan, 4933407C03Rik, Plcg2, 4632417N05Rik, Hsd17b2, Mphosph6
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-087N05.bB6Ng01-087N05.g
ACCDH900842DH900843
length1,134872
definitionDH900842|Mus musculus domesticus DNA, BAC clone: B6Ng01-087N05, 5' end.DH900843|Mus musculus domesticus DNA, BAC clone: B6Ng01-087N05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,260,505 - 119,261,672)(119,408,301 - 119,408,947)
sequence
gaattccacacccccaactctaatggctcaatacaagatgccaaaaggct
gctagttccctgttgaaaataagctttctgtttgtcacctggcagttttc
cctcccctcacagggcatttgtttggtgcattctggctcggggtctctgg
ggagattcaagtcaaaaagtttggtagatctgccattctggaggcttaaa
tgggtctggaagacctgactccaagatgaccttccacgtggatgctggca
ggaagctgttcaactgccctggcatcatccttatctttatccctgtaata
aatccgtgttaattgtcaacgtgacagaattcagaatcacctggaagatg
ggcctctgattacgcctacgggtaataatcttgactgtgttcactgatac
agagagacccgttttaattgtggacagttccattccctgggcaagggatg
ctggggtgtataaaatgtccaaagcaagctaagtaataacatgcacgcgt
tgctttgtctcttctgattagggatgcaatgtaagcatctgattcgagct
gttgttgtcttgactttgcccccatggtggactgtttcttgagcttggag
ctaaaataaacttttcctccccttaacttgatgttgtttttgtcatggca
accaaaaacaaacaaacaaatccagcacagcattcagagcatgggacagt
tgctcatgcgacgtccctgccactgctcggcggattacctgacgtcgcta
tggcatgcctggtgtggccagcctaagcaactggacatatctctggtgat
aggtccagttacctcaagatgaggaaactgagagctgctggacagtgatg
gagtgcagagagtaagatcccaggctttggagatcttgccatggtcacca
acgctgccctgtccatcagagcttgttctttggaacttggtcgccaagtc
agtcaaattcaagagaaagaaagagactctacttttaaagggggactata
aacacacacactccagataaaaaaaattatcccattgtaatgacgaaagt
cattgatatgttttgagataatgcctgcaattcacaagggcccgccacta
atagtgtgatggtgccattattactgtgaactac
gaattcaaggcgttgtgcttgctaccaccgagctaagtctccaatccctt
agtttagatttgccccagtgcttcctcaatccgtagcttgctactccctg
agagagttcactgaaggcactgaggacccgtgggaagagatgtgacaatg
ctgtgatggtttgaataagatagatctcataggaatttacattcttcgac
ttcagctgctgctggtggtggagagcgtcagaagttgtggccatgttgga
acaagttggacactggagatcggctttgggagtgtcaaggactcctgcca
tttcttatttgtgctctgcttcacgcttatgatgtaaaatgtgagccctt
ggctcgctgctccagctgccatgcctgctgcttgctccctctgctctgcc
aaagtggactttaatactcgaaaactataagcccaaataagccttcttct
ataagtggtgtttttatcacagtgctatgaaagaaactaatactgatgct
tggtcgtccccatcacctgtctcactgtattgaggatggagataaactgt
ggtctgctggccagggcttcttcttctgctggacagttggtacatgggga
gatgggagactaaacaggagggtgctagtagacaagagcgagggggtgag
tgggctagtcgtggaaattagctcagtgtgtctttcctttctgaatcagc
aagagaggaggaaatgctaccccttgcaatagacctttttatatgaatat
tgccctttaaagatgaaacgctttgtttttagggagatatgaattaatgg
atgaatgaatgaatgaatccatccatcaatccatctcatccttccatcta
atctaatctacttatatgtatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_119260505_119261672
seq2: B6Ng01-087N05.b_48_1181

seq1  GAATTCCACACCCCCAACTCTAATGGCTCAATACAAGATGCCAAAAGGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACACCCCCAACTCTAATGGCTCAATACAAGATGCCAAAAGGCT  50

seq1  GCTAGTTCCCTGTTGAAAATAAGCTTTCTGTTTGTCACCTGGCAGTTTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGTTCCCTGTTGAAAATAAGCTTTCTGTTTGTCACCTGGCAGTTTTC  100

seq1  CCTCCCCTCACAGGGCATTTGTTTGGTGCATTCTGGCTCGGGGTCTCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCTCACAGGGCATTTGTTTGGTGCATTCTGGCTCGGGGTCTCTGG  150

seq1  GGAGATTCAAGTCAAAAAGTTTGGTAGATCTGCCATTCTGGAGGCTTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATTCAAGTCAAAAAGTTTGGTAGATCTGCCATTCTGGAGGCTTAAA  200

seq1  TGGGTCTGGAAGACCTGACTCCAAGATGACCTTCCACGTGGATGCTGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCTGGAAGACCTGACTCCAAGATGACCTTCCACGTGGATGCTGGCA  250

seq1  GGAAGCTGTTCAACTGCCCTGGCATCATCCTTATCTTTATCCCTGTAATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCTGTTCAACTGCCCTGGCATCATCCTTATCTTTATCCCTGTAATA  300

seq1  AATCCGTGTTAATTGTCAACGTGACAGAATTCAGAATCACCTGGAAGATG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCGTGTTAATTGTCAACGTGACAGAATTCAGAATCACCTGGAAGATG  350

seq1  GGCCTCTGATTACGCCTACGGGTAATAATCTTGACTGTGTTCACTGATAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTCTGATTACGCCTACGGGTAATAATCTTGACTGTGTTCACTGATAC  400

seq1  AGAGAGACCCGTTTTAATTGTGGACAGTTCCATTCCCTGGGCAAGGGATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGACCCGTTTTAATTGTGGACAGTTCCATTCCCTGGGCAAGGGATG  450

seq1  CTGGGGTGTATAAAATGTCCAAAGCAAGCTAAGTAATAACATGCACGCGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGTGTATAAAATGTCCAAAGCAAGCTAAGTAATAACATGCACGCGT  500

seq1  TGCTTTGTCTCTTCTGATTAGGGATGCAATGTAAGCATCTGATTCGAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGTCTCTTCTGATTAGGGATGCAATGTAAGCATCTGATTCGAGCT  550

seq1  GTTGTTGTCTTGACTTTGCCCCCATGGTGGACTGTTTCTTGAGCTTGGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTTGTCTTGACTTTGCCCCCATGGTGGACTGTTTCTTGAGCTTGGAG  600

seq1  CTAAAATAAACTTTTCCTCCCCTTAACTTGATGTTGTTTTTGTCATGGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAATAAACTTTTCCTCCCCTTAACTTGATGTTGTTTTTGTCATGGCA  650

seq1  ACCAAAAACAAACAAACAAATCCAGCACAGCATTCAGAGCATGGGACAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAAAAACAAACAAACAAATCCAGCACAGCATTCAGAGCATGGGACAGT  700

seq1  TGCTCATGCGACGTCCCTGCCACTGCTCGGCGGATTACCTGACGTCGCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCATGCGACGTCCCTGCCACTGCTCGGCGGATTACCTGACGTCGCTA  750

seq1  TGGCATGCCTGGTGTGGCCAGCCTAAGCAACTGGACATATCTCTGGTGAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCATGCCTGGTGTGGCCAGCCTAAGCAACTGGACATATCTCTGGTGAT  800

seq1  AGGTCCAGTTACCTCAAAGATGAGGAAACTGAGAGCTGCTGGACAGTGAT  850
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  AGGTCCAGTTACCTC-AAGATGAGGAAACTGAGAGCTGCTGGACAGTGAT  849

seq1  GGAGTGCAGAGAGTAAGATCCCAGGCTTTGGAGATCTTGCCATGGTCACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTGCAGAGAGTAAGATCCCAGGCTTTGGAGATCTTGCCATGGTCACC  899

seq1  AACGCTGCCCTGTCCATCAGAGCTTGTTCTTTGGAACTTGGTCGCCAAGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGCTGCCCTGTCCATCAGAGCTTGTTCTTTGGAACTTGGTCGCCAAGT  949

seq1  CAAGTCAAATTCAAGAGAAAGAAAGGAGACTCTACCTTTTAAAGGGGGAC  1000
      | |||||||||||||||||||||| ||||||||| |||||||||||||||
seq2  C-AGTCAAATTCAAGAGAAAGAAA-GAGACTCTA-CTTTTAAAGGGGGAC  996

seq1  TATAAAAACAACAACAACAACCTCCAGATTAAAAAAAAAATTATCACATT  1050
      |||||| ||       |||  ||||||||   ||||||||||||| || |
seq2  TATAAACAC-------ACACACTCCAGAT---AAAAAAAATTATCCCA-T  1035

seq1  TGTAAAATTGACAGATAGTCCATTGATATGTTTTGAGAATTAAATGCGCT  1100
      |||||   |||| || ||| ||||||||||||||||||    ||||| ||
seq2  TGTAA---TGAC-GAAAGT-CATTGATATGTTTTGAGA---TAATGC-CT  1076

seq1  GCTATTCACAAAGTGCCCGCCACTAATAAGAGTTGGAATGGTGCCCATTA  1150
      || |||||| ||| ||||||||||||||     ||  |||||| ||||  
seq2  GCAATTCAC-AAGGGCCCGCCACTAATA----GTGTGATGGTG-CCAT--  1118

seq1  TATTACTGTGACAACTAC  1168
      ||||||||||  ||||||
seq2  TATTACTGTG--AACTAC  1134

seq1: chr8_119408301_119408947
seq2: B6Ng01-087N05.g_67_713 (reverse)

seq1  ACCCCCTCGCTCTTGTCTACTAGCACCCTCCTGTTTAGTCTCCCATCTCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCTCGCTCTTGTCTACTAGCACCCTCCTGTTTAGTCTCCCATCTCC  50

seq1  CCATGTACCAACTGTCCAGCAGAAGAAGAAGCCCTGGCCAGCAGACCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATGTACCAACTGTCCAGCAGAAGAAGAAGCCCTGGCCAGCAGACCACA  100

seq1  GTTTATCTCCATCCTCAATACAGTGAGACAGGTGATGGGGACGACCAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATCTCCATCCTCAATACAGTGAGACAGGTGATGGGGACGACCAAGC  150

seq1  ATCAGTATTAGTTTCTTTCATAGCACTGTGATAAAAACACCACTTATAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAGTATTAGTTTCTTTCATAGCACTGTGATAAAAACACCACTTATAGA  200

seq1  AGAAGGCTTATTTGGGCTTATAGTTTTCGAGTATTAAAGTCCACTTTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCTTATTTGGGCTTATAGTTTTCGAGTATTAAAGTCCACTTTGGC  250

seq1  AGAGCAGAGGGAGCAAGCAGCAGGCATGGCAGCTGGAGCAGCGAGCCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAGAGGGAGCAAGCAGCAGGCATGGCAGCTGGAGCAGCGAGCCAAG  300

seq1  GGCTCACATTTTACATCATAAGCGTGAAGCAGAGCACAAATAAGAAATGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCACATTTTACATCATAAGCGTGAAGCAGAGCACAAATAAGAAATGG  350

seq1  CAGGAGTCCTTGACACTCCCAAAGCCGATCTCCAGTGTCCAACTTGTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGTCCTTGACACTCCCAAAGCCGATCTCCAGTGTCCAACTTGTTCC  400

seq1  AACATGGCCACAACTTCTGACGCTCTCCACCACCAGCAGCAGCTGAAGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGGCCACAACTTCTGACGCTCTCCACCACCAGCAGCAGCTGAAGTC  450

seq1  GAAGAATGTAAATTCCTATGAGATCTATCTTATTCAAACCATCACAGCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAATGTAAATTCCTATGAGATCTATCTTATTCAAACCATCACAGCAT  500

seq1  TGTCACATCTCTTCCCACGGGTCCTCAGTGCCTTCAGTGAACTCTCTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACATCTCTTCCCACGGGTCCTCAGTGCCTTCAGTGAACTCTCTCAG  550

seq1  GGAGTAGCAAGCTACGGATTGAGGAAGCACTGGGGCAAATCTAAACTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGTAGCAAGCTACGGATTGAGGAAGCACTGGGGCAAATCTAAACTAAG  600

seq1  GGATTGGAGACTTAGCTCGGTGGTAGCAAGCACAACGCCTTGAATTC  647
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGGAGACTTAGCTCGGTGGTAGCAAGCACAACGCCTTGAATTC  647