BAC Information

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BAC

Clone NameB6Ng01-089O21
Chromosome8 (Build37)
Map Location 131,174,141 - 131,175,183
singlet/doubletsinglet
Overlap genenone
Upstream geneNrp1, LOC668494
Downstream geneItgb1, LOC100042659, LOC100042667, Ccdc7, 1700008F21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-089O21.bB6Ng01-089O21.g
ACCDH902375DH902376
length1,0381,199
definitionDH902375|Mus musculus domesticus DNA, BAC clone: B6Ng01-089O21, 5' end.DH902376|Mus musculus domesticus DNA, BAC clone: B6Ng01-089O21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctagaccattctgggctacaaaagacaatgttacaatagatgaca
gacagacagacagacagacagacagacagctgtttttcatagtctcttac
atgctgagcctagttccccaggacacctatggcagactgaaaagcagagc
aggcatctgcaccctttgcaatctgaaggagtaaacaaagcagctcagtc
tttaattagaggcctgtgtagaagaatgtcatatcttccagaatatcagt
tagtggttttcaaaagggacaaatgggtgtgggctagatatgtggcataa
ccacccagaaagaactgaaattgccagcgcacaaccacacaccctgatta
aaaatgtgctgccaggccactccctcaagcactggttttagttgtcctca
gtagcttgtgtctacatgtccagctaaaaataaatgattctgcgcagcac
tctctctgtgccagtctgatgacagtgagccaggaaagagcactgggcaa
ggaagggctaagctcctggacctatcactgtgatggatgctccaggcctc
agtatcctcagttagagagcaggaataacaacaggtgctagtgatttagc
ttggtacagtgcttacttaaagggcagggttctgttcctggcagtggata
aatgtggtgtggtgggtacacagctgaaatcccagcatttgggaggtgga
agcaggaggatcagaagttcaaagtcattctcggatacaccaagaatttg
aaatctgtgctcgcttcggcagcacatatactaaaaatggaatgacacag
agaagattagcatggcccctgtgcaaggatgacacgcaaattcgtgaagc
gttccatatttttttaatggatgctcacaatcagttaatggatggatcac
agggcccccaatggaggagctagagaaaatacccaaggagctaaagggac
tgcaaccctataggtggaacacatatgaactaaccagtacctcggagctc
tgactctagctgcatatgtattcaaagatgactagtcg
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggagtgcaggcttgtagaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactaccggaggatccagcaatacctctcctcggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacctagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
gaaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatataatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagatttgggaa
caaaacacccatggaaggagttacaaagtttggagctgagatgaaaggat
ggaccatgtagagactgccatatctggggatccatcccataatcagcatc
caaacgctgacaccattgcatacactagcaagattttgctgaaaggaccc
agatagagctgtctcttgtgagactatgccgggggcctagccaaacacag
aaagtggatgctcacagttcagctaatcgatggatcatagggctcccaat
ggaaggagctagaaaaaagtagcccaaggagctaaaggggattctgcaac
ctctataggtggaaaaacattatgaactaaccaggtaccccggagctttt
gactcttagctgcatatataattcaaaagatgactagtcgtccattactt
gtaaagagaggctcattggacttgcaatctttaatgctccagtcatgtaa
ctcctaggctcaaatggggaaagtggtgtggcagaggtagaagtggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_131174141_131175183
seq2: B6Ng01-089O21.b_49_1086

seq1  GAATTCTAGACCATTCTGGGCTACAAAAGACAATGTTACAATAGATGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGACCATTCTGGGCTACAAAAGACAATGTTACAATAGATGACA  50

seq1  GACAGACAGACAGACAGACAGACAGACAGCTGTTTTTCATAGTCTCTTAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGACAGACAGACAGACAGACAGACAGCTGTTTTTCATAGTCTCTTAC  100

seq1  ATGCTGAGCCTAGTTCCCCAGGACACCTATGGCAGACTGAAAAGCAGAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTGAGCCTAGTTCCCCAGGACACCTATGGCAGACTGAAAAGCAGAGC  150

seq1  AGGCATCTGCACCCTTTGCAATCTGAAGGAGTAAACAAAGCAGCTCAGTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCATCTGCACCCTTTGCAATCTGAAGGAGTAAACAAAGCAGCTCAGTC  200

seq1  TTTAATTAGAGGCCTGTGTAGAAGAATGTCATATCTTCCAGAATATCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTAGAGGCCTGTGTAGAAGAATGTCATATCTTCCAGAATATCAGT  250

seq1  TAGTGGTTTTCAAAAGGGACAAATGGGTGTGGGCTAGATATGTGGCATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGGTTTTCAAAAGGGACAAATGGGTGTGGGCTAGATATGTGGCATAA  300

seq1  CCACCCAGAAAGAACTGAAATTGCCAGCGCACAACCACACACCCTGATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCAGAAAGAACTGAAATTGCCAGCGCACAACCACACACCCTGATTA  350

seq1  AAAATGTGCTGCCAGGCCACTCCCTCAAGCACTGGTTTTAGTTGTCCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTGCTGCCAGGCCACTCCCTCAAGCACTGGTTTTAGTTGTCCTCA  400

seq1  GTAGCTTGTGTCTACATGTCCAGCTAAAAATAAATGATTCTGCGCAGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTTGTGTCTACATGTCCAGCTAAAAATAAATGATTCTGCGCAGCAC  450

seq1  TCTCTCTGTGCCAGTCTGATGACAGTGAGCCAGGAAAGAGCACTGGGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTGTGCCAGTCTGATGACAGTGAGCCAGGAAAGAGCACTGGGCAA  500

seq1  GGAAGGGCTAAGCTCCTGGACCTATCACTGTGATGGATGCTCCAGGCCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGGGCTAAGCTCCTGGACCTATCACTGTGATGGATGCTCCAGGCCTC  550

seq1  AGTATCCTCAGTTAGAGAGCAGGAATAACAACAGGTGCTAGTGATTTAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATCCTCAGTTAGAGAGCAGGAATAACAACAGGTGCTAGTGATTTAGC  600

seq1  TTGGTACAGTGCTTACTTAAAGGGCAGGGTTCTGTTCCTGGCAGTGGATA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTACAGTGCTTACTTAAAGGGCAGGGTTCTGTTCCTGGCAGTGGATA  650

seq1  AATGTGGTGTGGTGGGTACACAGCTGAAATCCCAGCATTTGGGAGGTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTGGTGTGGTGGGTACACAGCTGAAATCCCAGCATTTGGGAGGTGGA  700

seq1  AGCAGGAGGATCAGAAGTTCAAAGTCATTCTCGGATACACCAAGAATTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGAGGATCAGAAGTTCAAAGTCATTCTCGGATACACCAAGAATTTG  750

seq1  AAATCTGTGCTCGCTTCGGCAGCACATATACTAAAAATGGAATGACACAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTGTGCTCGCTTCGGCAGCACATATACTAAAAATGGAATGACACAG  800

seq1  AGAAGATTAGCATGGCCCCTGTGCAAGGATGACACGCAAATTCGTGAAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGATTAGCATGGCCCCTGTGCAAGGATGACACGCAAATTCGTGAAGC  850

seq1  GTTCCATATTTTTTAAATGGATGCTCACAATCAGTTAATGGATGGATCAC  900
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  GTTCCATATTTTTTTAATGGATGCTCACAATCAGTTAATGGATGGATCAC  900

seq1  AGGGCCCCCAATGGAGGAGCTAGAGAAAATACCCAAGGAGCTAAAGGGAA  950
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  AGGGCCCCCAATGGAGGAGCTAGAGAAAATACCCAAGGAGCTAAAGGG-A  949

seq1  CTGCAACCCTATAGGTGGAACAACATTATGAACTAACCAGTACCCCGGAG  1000
      ||||||||||||||||||||| ||| |||||||||||||||||| |||||
seq2  CTGCAACCCTATAGGTGGAAC-ACA-TATGAACTAACCAGTACCTCGGAG  997

seq1  CTCTTGACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCG  1043
      ||| |||||||||||||||||||||  |||||| | |||||||
seq2  CTC-TGACTCTAGCTGCATATGTATTCAAAGAT-GACTAGTCG  1038