BAC Information

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BAC

Clone NameB6Ng01-091K08
Chromosome8 (Build37)
Map Location 88,694,383 - 88,695,426
singlet/doubletsinglet
Overlap genenone
Upstream geneEG624855, Olfr371, Vps35, Orc6l, D830007F02Rik, 4921524J17Rik, Gpt2, Dnaja2, Neto2, Itfg1, LOC100040798, Phkb, LOC671665
Downstream geneLOC100040165, Abcc12, Lonp2, Siah1a, ENSMUSG00000074178, BC004022, LOC666960, EG625298, EG330819
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091K08.bB6Ng01-091K08.g
ACCDH903614DH903615
length1,0361,149
definitionDH903614|Mus musculus domesticus DNA, BAC clone: B6Ng01-091K08, 5' end.DH903615|Mus musculus domesticus DNA, BAC clone: B6Ng01-091K08, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatctgggtcatcttggcagtacacaggtgacagcccttagggaa
catatacttgtgcgttgtatgagcaggtcacacttgacgaaaccaccctg
gcactcttggccttatcttttctgtgaggtttttctccactgcaaagggc
atttcttgtgtttacaatatattctgtgcagattaccatctggtctggtt
ccactcagcaaataagcaaatagaacctccatgagtggaggtggaccact
gggtccagtgtctgaaagtataattgcatatgcagatatacctggaacca
aaagtgctcctgccttctgtgcctggcacctccagaatctatttcaaaca
cttccccagatcagtattaagaaattgcaaaccctgaagttgttaccatt
ttttattgtttcagcttcttcttgggggcttggctttgaatttggtctga
cgctgtacttgggagtccagcctgaaggtaaagggaggtttttaaagcag
agcacgagaattaatgtcccttgcaatgcaaaagcctcaggtaatgtaac
tatggacacctcggcaaaggcagagttacaatctctaggcagagcaggga
ggctgtctctgctgcatggcaatcagcaagccttagaggctcaaggtcct
cagaggtggccaactcctcaaaaatcaccaactgaatctacaaggtcaca
tttttccttattcatgcccacattttgacagaaaacattggaacactacc
aaacactatcacgccttatttttatctggcttttgcttgcatctacctta
taaatatacaaataatattttaaacaattatataaattaattttatgttt
aattaaattaattagtatatttaattagcatatatccatgcatatgtaca
cacacacacacacacactccagagaaagaaatcatttgggaagaagaaca
gataagggttttataagaaaatagctcatgtgattgcgaggctggcagtc
ccaggagctgcatatagtattaggaaagagataaag
gaattctgggaatttatcaaagggaatataaatgctggggccctgatagg
tggggtttttcattgttgttggtgtttgtagtttgttatcaaagaagtgg
gcaaagaagaaacaaaagaaataaaattagattcagtgagttctccctct
ctctcctccatccttctttctctcctatctagtgttagagagtgatatga
tactgaggggataaaaggtgggaaaaagaagaacctgaaaaatagcaaag
gccagttataggtggtgcctaatgtggggcaaagcagaataggaaatttt
atttcgattgctgtaaagaaaataacaaggaatgaagtggatatatatat
ttttaaggacaccagcaaaaatttattatggctgctactactgggatgtt
cccttctttgcccccagaagggattttcttggttttttttccttcataaa
ctttattttttaaaagggttgaaagacttgcagacagaagtggacgtgct
tgagaggcaaggggcaccggaaaagagagaacaaaaatgctgagccatag
tgagcaggagtttctcatgggagggaaaagagaaagcactctgccagagg
gcagtcaggtcagaggaaagctgaaaaggcaggaggaaaatgtgatgaaa
cagcctgtttcaaaagaaaagattaatctcaaacctacctcactgccaga
gttacaggaggggtgaccctgggttatgaggtcatcagctttcccagaag
tcatacaccatatgcctgctaaaagggtggaacaaggtcatggagggata
ggatggtatcctatagaaaggacagatgtaaggccttttaaagagtctat
tatctcatatgggatgcacttgctttatgtgtaacaaattctaaataatt
gggctactcaaatggcattattccacaagactagaaggaattggtctgca
gttgccatggtacatggtagagggaagatttgtgataatgactacaaaaa
gatgaggagatgattacagccaaagatgagtgctggttaaggctgatatt
ctgtaaaaagaacagatttcatttggtgacactactttggaacagtgtca
tttattggctttaagagcttggggataagttgtaagaagttgagaaaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_88694383_88695426
seq2: B6Ng01-091K08.b_48_1083

seq1  GAATTCATCTGGGTCATCTTGGCAGTACACAGGTGACAGCCCTTAGGGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATCTGGGTCATCTTGGCAGTACACAGGTGACAGCCCTTAGGGAA  50

seq1  CATATACTTGTGCGTTGTATGAGCAGGTCACACTTGACGAAACCACCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATACTTGTGCGTTGTATGAGCAGGTCACACTTGACGAAACCACCCTG  100

seq1  GCACTCTTGGCCTTATCTTTTCTGTGAGGTTTTTCTCCACTGCAAAGGGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTCTTGGCCTTATCTTTTCTGTGAGGTTTTTCTCCACTGCAAAGGGC  150

seq1  ATTTCTTGTGTTTACAATATATTCTGTGCAGATTACCATCTGGTCTGGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTGTGTTTACAATATATTCTGTGCAGATTACCATCTGGTCTGGTT  200

seq1  CCACTCAGCAAATAAGCAAATAGAACCTCCATGAGTGGAGGTGGACCACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTCAGCAAATAAGCAAATAGAACCTCCATGAGTGGAGGTGGACCACT  250

seq1  GGGTCCAGTGTCTGAAAGTATAATTGCATATGCAGATATACCTGGAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTCCAGTGTCTGAAAGTATAATTGCATATGCAGATATACCTGGAACCA  300

seq1  AAAGTGCTCCTGCCTTCTGTGCCTGGCACCTCCAGAATCTATTTCAAACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCTCCTGCCTTCTGTGCCTGGCACCTCCAGAATCTATTTCAAACA  350

seq1  CTTCCCCAGATCAGTATTAAGAAATTGCAAACCCTGAAGTTGTTACCATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCCAGATCAGTATTAAGAAATTGCAAACCCTGAAGTTGTTACCATT  400

seq1  TTTTATTGTTTCAGCTTCTTCTTGGGGGCTTGGCTTTGAATTTGGTCTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTGTTTCAGCTTCTTCTTGGGGGCTTGGCTTTGAATTTGGTCTGA  450

seq1  CGCTGTACTTGGGAGTCCAGCCTGAAGGTAAAGGGAGGTTTTTAAAGCAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGTACTTGGGAGTCCAGCCTGAAGGTAAAGGGAGGTTTTTAAAGCAG  500

seq1  AGCACGAGAATTAATGTCCCTTGCAATGCAAAAGCCTCAGGTAATGTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCACGAGAATTAATGTCCCTTGCAATGCAAAAGCCTCAGGTAATGTAAC  550

seq1  TATGGACACCTCGGCAAAGGCAGAGTTACAATCTCTAGGCAGAGCAGGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGACACCTCGGCAAAGGCAGAGTTACAATCTCTAGGCAGAGCAGGGA  600

seq1  GGCTGTCTCTGCTGCATGGCAATCAGCAAGCCTTAGAGGCTCAAGGTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTCTCTGCTGCATGGCAATCAGCAAGCCTTAGAGGCTCAAGGTCCT  650

seq1  CAGAGGTGGCCAACTCCTCAAAAATCACCAACTGAATCTACAAGGTCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGGTGGCCAACTCCTCAAAAATCACCAACTGAATCTACAAGGTCACA  700

seq1  TTTTTCCTTATTCATGCCCACATTTTGACAGAAAACATTGGAACACTACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCCTTATTCATGCCCACATTTTGACAGAAAACATTGGAACACTACC  750

seq1  AAACACTATCAGGCCTTATTTTTATCTGGCTTTTGCTTGCATCTACCTTA  800
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AAACACTATCACGCCTTATTTTTATCTGGCTTTTGCTTGCATCTACCTTA  800

seq1  TAAATATACAAATAATATTTTAAACAATTATATAAATTAATTTTATGTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATATACAAATAATATTTTAAACAATTATATAAATTAATTTTATGTTT  850

seq1  AATTAAATTAATTAGTATATTTAATTAGCATATATCCATGCATATGTACA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATTAATTAGTATATTTAATTAGCATATATCCATGCATATGTACA  900

seq1  CACACACACACACACACTCCAGAGAAAGAAAATCATTTGGGAAGAAGGAA  950
      |||||||||||||||||||||||||||| ||||||||||||||||| |||
seq2  CACACACACACACACACTCCAGAGAAAG-AAATCATTTGGGAAGAA-GAA  948

seq1  CAGATAAAGGGTTTTTATAAGAAAATAGCTCATGTGATTGTGGAGGCTTG  1000
      |||||||  || ||||||||||||||||||||||||||||  ||||| ||
seq2  CAGATAA--GGGTTTTATAAGAAAATAGCTCATGTGATTG-CGAGGC-TG  994

seq1  GCAAGTCCCAGGAGCTGCAGAGAGTAATTAGGAAAGAGACAAAG  1044
      || |||||||||||||||| | ||| ||||||||||||| ||||
seq2  GC-AGTCCCAGGAGCTGCATATAGT-ATTAGGAAAGAGATAAAG  1036