BAC Information

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BAC

Clone NameB6Ng01-093L21
Chromosome8 (Build37)
Map Location 111,709,223 - 111,826,401
singlet/doubletdoublet
Overlap gene4922502B01Rik
Upstream geneAtbf1
Downstream geneGm1943, LOC100042829, Pmfbp1, Dhx38, Txnl4b, Hp, Dhodh, Pkd1l3, 2400003C14Rik, 4930566A11Rik, D8Ertd587e, LOC668089, LOC672735, Ap1g1, Phlppl, Marveld3, LOC100041884, Tat, Chst4, Zfp612, Gm1467, Calb2, BC025546, Hydin
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093L21.bB6Ng01-093L21.g
ACCDH905142DH905143
length1,134877
definitionDH905142|Mus musculus domesticus DNA, BAC clone: B6Ng01-093L21, 5' end.DH905143|Mus musculus domesticus DNA, BAC clone: B6Ng01-093L21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(111,825,347 - 111,826,401)(111,709,223 - 111,710,100)
sequence
gaattcatcgtgactattaagaaaacgagaagtctaaagcaagcaatata
accatacacagaaaagtgcaagtgatgctcagtgtgtatgtactaatgag
aggctcccaaactacatgacaggaagtgctaaaactgaagagatgtttat
tttttttaaagatttatttatttatcacgtatacagaattctgcctggat
atatgcctgcaggtcagaaaatggcgccaaatatcattatagatggctat
aagctaccatgtggttgctgggaattgaactcaggacctccggaagaaca
gccactgctcttaacctctgagccagctctccagccccagatgttttaaa
tatatccatagttttcaggctcacatgaaacattcacttcaatataattt
tatggccagccacataatgtctcaataaaagtcagaagattaaaattaca
cagaacattctaagatcaaaataaaattaaattaaaagtcaacagcaaaa
cccttctatcggacatctggaagttaaacaagtgactcacagctgacatc
tggatcacagaagatactgctatggaaatcagggggcaagtcccagtagt
ggtggatacagaaagctcacgtcaggaagaaaaagagacacctgtactgg
ttcttagcaagaaaaggcatagatttaatgattactttagaaaaaaatca
gtgatttaaatttcttccataagaagtgaagaaaaactcagtaaggaaaa
cagaaggaaattatgaagagtagaaaatcagtgagagaaaacggggacct
gataggagcctccctcagcaaagccagcaaaggaactcacacaatatgta
ctcactgataagtggatattagcccagaaacttaggatacccaagatata
agatacaatttgctaaacgcatgaaattcagagaacgaagaccaaagtgt
agacactttgccccttcttagatatgggaacaaaacacccatggaaggag
ttacagagacaaaatttggagctgtgacgaaaggatggaccatctagtga
ttgcaatatgcaaggatccattcccataatcagcttccaacgctgaccca
ttgcataccactagcagatttgttgaaaggaccc
gaattcctctcatgttctgagaacgagaatgtcttaagctttgatagaac
agggcaattttatattttccgtctgactactttaaaaggttcattgtctt
ttaattaaactacggtggggggggggctgctgggggagagagcagagatt
aaaagctgtcgtgctgtaaacggggtggcttttagcaactagtagatgag
tgaagccaccacctcaagcaagatgaactacagcaacaagttctgtgcct
cgaagcttctccttgtctgactgtagcagtaatttggagttaatttgtgt
ggcttccgcagtaaaaaaaaaaaaaaaagactgtgttctatgtcgtctga
ctcttcctagcatggcttcgcagctgttaggtcccctttgtatggtccag
caccgaaccaccaccacaggtgaaagccaggtgagcaggttagatgggca
tcttggaccaggcttagtgttcaccacgtgttgtttactctccacaaaat
gcctgcgtggatcagcctctgcctccattctcccacttcctgccttcacc
aacaaacggagggccactctcctctgggcaagtcacactgttaggttggg
cgaatgtctgggtttctctgggagttttattgcctggcacattgtcttgt
tttcctttgtctgcgtgaacactttttttccccttctttgtgtctgtttt
tctccctttgcctcctactccccacttgtcccaaatccttgaagcccaat
gaggctgtggtgacaccttcggggcagtgctgggagtgaattacagccag
gagtgagcttctggtggtggtagcctcacccacatacagtgaataatagg
atgtatggtttgcttcatcaaaaaact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_111825347_111826401
seq2: B6Ng01-093L21.b_128_1178 (reverse)

seq1  GGGTCCTTTCAACAAAATCTTGCTAGT-GTATGCAATGGTGTCAGCGTTT  49
      ||||||||||||| ||||| ||||||| ||||||||||| ||||||| ||
seq2  GGGTCCTTTCAAC-AAATC-TGCTAGTGGTATGCAATGG-GTCAGCG-TT  46

seq1  GGAAGCTGATTATGGG-ATGGATCCCTGCATATGGCAATCACTAGATGGT  98
      |||||||||||||||| |||||||| ||||||| ||||||||||||||||
seq2  GGAAGCTGATTATGGGAATGGATCCTTGCATATTGCAATCACTAGATGGT  96

seq1  CCATCCTTTCGTCACAGCTCCAAATTTTGTCTCTGTAACTCCTTCCATGG  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATCCTTTCGTCACAGCTCCAAATTTTGTCTCTGTAACTCCTTCCATGG  146

seq1  GTGTTTTGTTCCCATATCTAAGAAGGGGCAAAGTGTCTACACTTTGGTCT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTTGTTCCCATATCTAAGAAGGGGCAAAGTGTCTACACTTTGGTCT  196

seq1  TCGTTCTTCTTGAATTTCATGCGTTTAGCAAATTGTATCTTATATCTTGG  248
      |||||||   ||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTCT--CTGAATTTCATGCGTTTAGCAAATTGTATCTTATATCTTGG  244

seq1  GTATCCTAAGTTTCTGGGCTAATATCCACTTATCAGTGAGTACATATTGT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCTAAGTTTCTGGGCTAATATCCACTTATCAGTGAGTACATATTGT  294

seq1  GTGAGTTCCTTTGCTGGCTTTGCTGAGGGAGGCTCCTATCAGGTCCCCGT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTTCCTTTGCTGGCTTTGCTGAGGGAGGCTCCTATCAGGTCCCCGT  344

seq1  TTTCTCTCACTGATTTTCTACTCTTCATAATTTCCTTCTGTTTTCCTTAC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTCACTGATTTTCTACTCTTCATAATTTCCTTCTGTTTTCCTTAC  394

seq1  TGAGTTTTTCTTCACTTCTTATGGAAGAAATTTAAATCACTGATTTTTTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTTTCTTCACTTCTTATGGAAGAAATTTAAATCACTGATTTTTTT  444

seq1  CTAAAGTAATCATTAAATCTATGCCTTTTCTTGCTAAGAACCAGTACAGG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAGTAATCATTAAATCTATGCCTTTTCTTGCTAAGAACCAGTACAGG  494

seq1  TGTCTCTTTTTCTTCCTGACGTGAGCTTTCTGTATCCACCACTACTGGGA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTTTTTCTTCCTGACGTGAGCTTTCTGTATCCACCACTACTGGGA  544

seq1  CTTGCCCCCTGATTTCCATAGCAGTATCTTCTGTGATCCAGATGTCAGCT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCCCCTGATTTCCATAGCAGTATCTTCTGTGATCCAGATGTCAGCT  594

seq1  GTGAGTCACTTGTTTAACTTCCAGATGTCCGATAGAAGGGTTTTGCTGTT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGTCACTTGTTTAACTTCCAGATGTCCGATAGAAGGGTTTTGCTGTT  644

seq1  GACTTTTAATTTAATTTTATTTTGATCTTAGAATGTTCTGTGTAATTTTA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTAATTTAATTTTATTTTGATCTTAGAATGTTCTGTGTAATTTTA  694

seq1  ATCTTCTGACTTTTATTGAGACATTATGTGGCTGGCCATAAAATTATATT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTCTGACTTTTATTGAGACATTATGTGGCTGGCCATAAAATTATATT  744

seq1  GAAGTGAATGTTTCATGTGAGCCTGAAAACTATGGATATATTTAAAACAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTGAATGTTTCATGTGAGCCTGAAAACTATGGATATATTTAAAACAT  794

seq1  CTGGGGCTGGAGAGCTGGCTCAGAGGTTAAGAGCAGTGGCTGTTCTTCCG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGCTGGAGAGCTGGCTCAGAGGTTAAGAGCAGTGGCTGTTCTTCCG  844

seq1  GAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTAGCTTATAGCCATCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTCCTGAGTTCAATTCCCAGCAACCACATGGTAGCTTATAGCCATCT  894

seq1  ATAATGATATTTGGCGCCATTTTCTGACCTGCAGGCATATATCCAGGCAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATGATATTTGGCGCCATTTTCTGACCTGCAGGCATATATCCAGGCAG  944

seq1  AATTCTGTATACGTGATAAATAAATAAATCTTTAAAAAAAATAAACATCT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTGTATACGTGATAAATAAATAAATCTTTAAAAAAAATAAACATCT  994

seq1  CTTCAGTTTTAGCACTTCCTGTCATGTAGTTTGGGAGCCTCTCATTAGTA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAGTTTTAGCACTTCCTGTCATGTAGTTTGGGAGCCTCTCATTAGTA  1044

seq1  CATACAC  1055
      |||||||
seq2  CATACAC  1051

seq1: chr8_111709223_111710100
seq2: B6Ng01-093L21.g_69_945

seq1  GAATTCCTCTCATGTTCTGAGAACGAGAATGTCTTAAGCTTTGATAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCTCATGTTCTGAGAACGAGAATGTCTTAAGCTTTGATAGAAC  50

seq1  AGGGCAATTTTATATTTTCCGTCTGACTACTTTAAAAGGTTCATTGTCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAATTTTATATTTTCCGTCTGACTACTTTAAAAGGTTCATTGTCTT  100

seq1  TTAATTAAACTACGGTGGGGGGGGGGCTGCTGGGGGAGAGAGCAGAGATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTAAACTACGGTGGGGGGGGGGCTGCTGGGGGAGAGAGCAGAGATT  150

seq1  AAAAGCTGTCGTGCTGTAAACGGGGTGGCTTTTAGCAACTAGTAGATGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCTGTCGTGCTGTAAACGGGGTGGCTTTTAGCAACTAGTAGATGAG  200

seq1  TGAAGCCACCACCTCAAGCAAGATGAACTACAGCAACAAGTTCTGTGCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCCACCACCTCAAGCAAGATGAACTACAGCAACAAGTTCTGTGCCT  250

seq1  CGAAGCTTCTCCTTGTCTGACTGTAGCAGTAATTTGGAGTTAATTTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAAGCTTCTCCTTGTCTGACTGTAGCAGTAATTTGGAGTTAATTTGTGT  300

seq1  GGCTTCCGCAGTAAAAAAAAAAAAAAAAGACTGTGTTCTATGTCGTCTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCCGCAGTAAAAAAAAAAAAAAAAGACTGTGTTCTATGTCGTCTGA  350

seq1  CTCTTCCTAGCATGGCTTCGCAGCTGTTAGGTCCCCTTTGTATGGTCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCCTAGCATGGCTTCGCAGCTGTTAGGTCCCCTTTGTATGGTCCAG  400

seq1  CACCGAACCACCACCACAGGTGAAAGCCAGGTGAGCAGGTTAGATGGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGAACCACCACCACAGGTGAAAGCCAGGTGAGCAGGTTAGATGGGCA  450

seq1  TCTTGGACCAGGCTTAGTGTTCACCACGTGTTGTTTACTCTCCACAAAAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGACCAGGCTTAGTGTTCACCACGTGTTGTTTACTCTCCACAAAAT  500

seq1  GCCTGCGTGGATCAGCCTCTGCCTCCATTCTCCCACTTCCTGCCTTCACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCGTGGATCAGCCTCTGCCTCCATTCTCCCACTTCCTGCCTTCACC  550

seq1  AACAAACGGAGGGCCACTCTCCTCTGGGCAAGTCACACTGTTAGGTTGGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACGGAGGGCCACTCTCCTCTGGGCAAGTCACACTGTTAGGTTGGG  600

seq1  CGAATGTCTGGGTTTCTCTGGGAGTTTTATTGCCTGGCACATTGTCTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATGTCTGGGTTTCTCTGGGAGTTTTATTGCCTGGCACATTGTCTTGT  650

seq1  TTTCCTTTGTCTGCGTGAACACTTTTTTTCCCCTTCTTTGTGTCTGTTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTTTGTCTGCGTGAACACTTTTTTTCCCCTTCTTTGTGTCTGTTTT  700

seq1  TCTCCCTTTGCCTCCTACTCCCCACTTGTCCCCAAATCCTTGAAG-CCAA  749
      ||||||||||||||||||||||||||||| ||||||||||||||| ||||
seq2  TCTCCCTTTGCCTCCTACTCCCCACTTGT-CCCAAATCCTTGAAGCCCAA  749

seq1  TGAGGCTGTGGTGACACCTTCTGGGCAGTGCTGGGAGTGAATTACAGCCA  799
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  TGAGGCTGTGGTGACACCTTCGGGGCAGTGCTGGGAGTGAATTACAGCCA  799

seq1  GGAGTGAGCTTCCTGGTGGTGGTAG-CTCACCCACATACAGTGAATAATA  848
      ||||||||||| ||||||||||||| ||||||||||||||||||||||||
seq2  GGAGTGAGCTT-CTGGTGGTGGTAGCCTCACCCACATACAGTGAATAATA  848

seq1  GGATGTATGGTTTGCTTCATCAAAGAAACT  878
      |||||||||||||||||||||||| |||||
seq2  GGATGTATGGTTTGCTTCATCAAA-AAACT  877