MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-094J15
Chromosome	8 (Build37)
Map Location	91,673,601 - 91,674,285
singlet/doublet	singlet
Overlap gene	EG625801
Upstream gene	Heatr3, Papd5, Adcy7, Brd7, LOC100040369, Nkd1, 9130017C17Rik, Nod2, Cyld, LOC675985, Sall1, LOC100041089
Downstream gene	EG384862
Link	Open Mouse BAC browser

Click to get alignment info.

name	Heatr3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:234549 MGI:2444491
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Papd5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:214627 MGI:1917820
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 162 ESTs, 5 Proteins

name	Adcy7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11513 MGI:102891
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Brd7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:26992 MGI:1349766
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100040369 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100040369
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins

name	Nkd1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:93960 MGI:2135954
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	9130017C17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71607 MGI:1918857
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nod2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:257632 MGI:2429397
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyld (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74256 MGI:1921506
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC675985 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675985
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 993 ESTs, 7 Proteins

name	Sall1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:58198 MGI:1889585
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100041089 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100041089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	EG625801 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:625801 MGI:3647663
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 149 ESTs, 4 Proteins pseudo : _no_value

name	EG384862 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:384862 MGI:3643649
definition	note : predicted gene, EG384862 pseudo : _no_value

name	Heatr3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:40789300 GeneID:234549 MGI:2444491
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : HEAT repeat containing 3 transcript_id : NM_172757.3

name	Papd5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149258973 GeneID:214627 MGI:1917820
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 162 ESTs, 5 Proteins product : PAP associated domain containing 5, transcript variant 1 transcript_id : XM_134422.9

name	Adcy7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680645 GeneID:11513 MGI:102891
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adenylate cyclase 7 transcript_id : NM_007406.1

name	Adcy7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802403 GeneID:11513 MGI:102891
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adenylate cyclase 7 transcript_id : NM_001037723.2

name	Adcy7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142377895 GeneID:11513 MGI:102891
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adenylate cyclase 7 transcript_id : NM_001037724.2

name	Brd7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755233 GeneID:26992 MGI:1349766
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bromodomain containing 7 transcript_id : NM_012047.1

name	LOC100040369 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258975 GeneID:100040369
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 Proteins product : similar to retinitis pigmentosa GTPase regulator interacting protein 1 transcript_id : XM_001474559.1

name	Nkd1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31980621 GeneID:93960 MGI:2135954
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : naked cuticle 1 homolog (Drosophila) transcript_id : NM_027280.2

name	9130017C17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350367 GeneID:71607 MGI:1918857
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 9130017C17 gene transcript_id : NM_027840.2

name	Nod2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:83977453 GeneID:257632 MGI:2429397
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nucleotide-binding oligomerization domain containing 2 transcript_id : NM_145857.2

name	Cyld (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27734059 GeneID:74256 MGI:1921506
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cylindromatosis (turban tumor syndrome) transcript_id : NM_173369.1

name	LOC675985 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258985 GeneID:675985
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 993 ESTs, 7 Proteins product : similar to ribosomal protein S6 transcript_id : XM_001476577.1

name	Sall1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:45598370 GeneID:58198 MGI:1889585
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sal-like 1 (Drosophila) transcript_id : NM_021390.2

name	LOC100041089 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149258989 GeneID:100041089
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100041089 transcript_id : XM_001476646.1

name	Heatr3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:40789301 CCDS:CCDS22508.1 GeneID:234549 MGI:2444491
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 product : HEAT repeat containing 3 protein_id : NP_766345.3

name	Papd5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149258974 GeneID:214627 MGI:1917820
definition	codon_start : 1 product : similar to PAP-associated domain-containing protein 5 (Topoisomerase-related function protein 4-2) (TRF4-2) isoform 1 protein_id : XP_134422.8

name	Adcy7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83582786 CCDS:CCDS22509.1 GeneID:11513 MGI:102891
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0004016 - adenylate cyclase activity [Evidence TAS]; GO:0016829 - lyase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA] GO_process : GO:0007190 - adenylate cyclase activation [Evidence TAS]; GO:0006171 - cAMP biosynthesis [Evidence TAS]; GO:0009190 - cyclic nucleotide biosynthesis [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 exception : mismatches in translation note : adenylyl cyclase type VII product : adenylate cyclase 7 protein_id : NP_001032812.1

name	Adcy7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83582788 CCDS:CCDS22509.1 GeneID:11513 MGI:102891
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0004016 - adenylate cyclase activity [Evidence TAS]; GO:0016829 - lyase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA] GO_process : GO:0007190 - adenylate cyclase activation [Evidence TAS]; GO:0006171 - cAMP biosynthesis [Evidence TAS]; GO:0009190 - cyclic nucleotide biosynthesis [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 note : adenylyl cyclase type VII product : adenylate cyclase 7 protein_id : NP_001032813.1

name	Adcy7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680646 CCDS:CCDS22509.1 GeneID:11513 MGI:102891
definition	GO_component : GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence TAS] GO_function : GO:0004016 - adenylate cyclase activity [Evidence TAS]; GO:0016829 - lyase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA] GO_process : GO:0007190 - adenylate cyclase activation [Evidence TAS]; GO:0006171 - cAMP biosynthesis [Evidence TAS]; GO:0009190 - cyclic nucleotide biosynthesis [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 exception : mismatches in translation function : synthesizes cyclic AMP note : adenylyl cyclase type VII product : adenylate cyclase 7 protein_id : NP_031432.1

name	Brd7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755234 CCDS:CCDS22510.1 GeneID:26992 MGI:1349766
definition	GO_component : GO:0005634 - nucleus [Evidence ISS] [Evidence IPI] GO_function : GO:0042393 - histone binding [Evidence ISS]; GO:0005515 - protein binding [Evidence IPI]; GO:0008134 - transcription factor binding [Evidence ISS] GO_process : GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 note : bromodomain-containing protein; protein tyrosine phosphatase, non-receptor type 13 interacting protein; bromodomain protein 75 kDa; bromodomain-containing 7 product : bromodomain containing 7 protein_id : NP_036177.1

name	LOC100040369 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258976 GeneID:100040369
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001474609.1

name	Nkd1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980622 CCDS:CCDS22511.1 GeneID:93960 MGI:2135954
definition	codon_start : 1 exception : mismatches in translation product : naked cuticle 1 homolog protein_id : NP_081556.2

name	9130017C17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21313650 CCDS:CCDS22512.1 GeneID:71607 MGI:1918857
definition	GO_function : GO:0005488 - binding [Evidence IEA]; GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : selectin ligand interactor cytoplasmic-1 protein_id : NP_082116.1

name	Nod2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:83977454 GeneID:257632 MGI:2429397
definition	GO_component : GO:0005737 - cytoplasm [Evidence TAS]; GO:0005829 - cytosol [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA]; GO:0005886 - plasma membrane [Evidence ISS]; GO:0031982 - vesicle [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0050700 - CARD domain binding [Evidence ISS]; GO:0019899 - enzyme binding [Evidence ISS]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0042834 - peptidoglycan binding [Evidence ISS] [Evidence TAS]; GO:0005515 - protein binding [Evidence IEA]; GO:0019901 - protein kinase binding [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0051092 - activation of NF-kappaB transcription factor [Evidence ISS] [Evidence IDA]; GO:0001816 - cytokine production [Evidence IMP]; GO:0042742 - defense response to bacterium [Evidence ISS]; GO:0016045 - detection of bacterium [Evidence ISS]; GO:0006954 - inflammatory response [Evidence TAS]; GO:0043123 - positive regulation of I-kappaB kinase/NF-kappaB cascade [Evidence ISS]; GO:0051259 - protein oligomerization [Evidence TAS]; GO:0042981 - regulation of apoptosis [Evidence IEA]; GO:0007165 - signal transduction [Evidence TAS]; GO:0008063 - Toll signaling pathway [Evidence IMP] codon_start : 1 product : caspase recruitment domain family, member 15 protein_id : NP_665856.2

name	Cyld (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734060 CCDS:CCDS22513.1 GeneID:74256 MGI:1921506
definition	GO_function : GO:0004197 - cysteine-type endopeptidase activity [Evidence IEA]; GO:0008234 - cysteine-type peptidase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0008233 - peptidase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA] GO_process : GO:0006512 - ubiquitin cycle [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 product : ubiquitin carboxyl-terminal hydrolase CYLD protein_id : NP_775545.1

name	LOC675985 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258986 GeneID:675985
definition	codon_start : 1 product : similar to ribosomal protein S6 protein_id : XP_001476627.1

name	Sall1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:11496251 GeneID:58198 MGI:1889585
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003674 - molecular_function [Evidence ND]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0031129 - inductive cell-cell signaling [Evidence IMP]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0001657 - ureteric bud development [Evidence IMP] codon_start : 1 exception : unclassified translation discrepancy function : zinc finger transcription factor product : sal-like 1 protein_id : NP_067365.1

name	LOC100041089 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149258990 GeneID:100041089
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001476696.1

name	EG625801 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:149258977 GeneID:625801 MGI:3647663
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 149 ESTs, 4 Proteins product : predicted gene, EG625801 pseudo : _no_value transcript_id : XR_031896.1

clone name	MSMg01-321F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493F05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-209K04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-295D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-423I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269B07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389M24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-480J01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-513J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-484J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292J10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-049P06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388D13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-142A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333C03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-150N15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-178P23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125H07
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-538G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-135C02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-139L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147N08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-117C19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-464N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-512G01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-051J19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-217P11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-055K20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-457B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494K06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369G24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082L18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467D04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-067F19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052A21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-437G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199C19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-069E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-290O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-067E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-058A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-103A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271A15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271H19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264J04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531L06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-175L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-441K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-444F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-161B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-083K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087I18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-301K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-502K22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317D05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456O16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-066L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247M04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-122P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-176L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164K06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179P20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-289P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-006H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098K05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098G16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-162L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-134O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-101D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-178E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079E02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335K22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-022F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237A10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-146N19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-279F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-012B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198F17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042C22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-180M22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-327O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-126J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178F03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-229H02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-094J15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-315O07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061I24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-021E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059H17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-258K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153C06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-320P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265K04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-014D21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-254E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046C11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-185P22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228A09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073L23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-271I23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-233A04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281J06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156O04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-283I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048E08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034M15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-032P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-228F04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-240L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231O21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-236E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208H22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135I17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-146I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246C07
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name		B6Ng01-094J15.g
ACC		DH905777
length		688
definition		DH905777\|Mus musculus domesticus DNA, BAC clone: B6Ng01-094J15, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence		gaattcaaggggggtggggggggactgaggtctggagagagaattgtgct tcccaaagacacacagaaagccaagattcaatactgctatccagatgccc acactcagccaaaactgagtacccagtacctggcactttctagaagccag agatagaaggccatgaagacgtggtgcctgccttgacgaggtgttagtct ggacattgagaaagacactcaccaagtgttcgtggagagtagatcaccta acactgtcatgcacatcattgaattgttttgagactcccaaagagtagat ttccaaggaactccatatgcttctacttctgtaagccccacagtcgaagc aggtgtcctgtcttggatgtggattctctgaggcgaggctgcagtactct aagatgtagcattctcgagcttcttattggagatgttgaacccaggctcc cataattacatctgcttccccccactccagtcccagtgctagaacccagg gcctcctgcatgccccgcaaacactccacctgagctgtacccacttgttc tactaagaacccttttaagggaaagcagaataaattggtccctgcaatga agagtcttcctaaaaggagaatgaccagggacattccactgcatatgaat tcctgaagtctagcttaaggagacagttttcaaggcgg
quality values		Open. Hide. 47 61 18 38 55 16 17 11 11 21 14 20 23 22 22 61 55 55 55 55 61 55 55 47 27 55 61 49 49 49 61 59 59 61 61 61 59 61 59 61 59 61 59 49 61 61 61 38 38 31 26 26 21 19 19 21 32 41 61 59 59 61 59 61 59 52 61 61 59 59 59 61 52 59 52 59 59 59 59 59 59 59 59 59 59 61 61 61 59 61 61 61 59 59 61 61 61 61 61 59 59 61 52 59 59 61 59 45 59 61 59 61 59 61 59 59 59 59 39 59 59 59 61 61 59 59 59 61 61 59 59 61 59 59 59 61 61 61 61 55 61 59 52 59 59 52 59 59 59 52 61 52 59 59 59 59 61 61 59 61 59 61 59 59 59 59 59 49 61 61 45 59 59 52 52 59 59 59 59 61 59 59 61 61 61 59 59 52 61 52 59 59 61 61 61 61 59 61 59 61 61 61 59 59 59 59 59 59 59 49 59 59 59 59 61 59 59 61 61 61 59 59 59 49 59 59 59 61 59 59 59 38 45 59 52 59 37 59 59 52 59 45 61 59 59 59 59 59 59 61 61 61 59 61 61 61 59 59 59 59 59 59 52 59 52 61 59 59 61 59 59 59 59 28 30 32 15 27 24 59 59 61 59 61 61 61 61 61 59 59 59 59 59 61 59 59 59 41 61 49 55 55 52 43 33 36 25 49 52 61 61 55 36 32 13 27 30 36 52 43 43 52 52 52 52 55 55 55 55 52 55 52 43 52 39 55 55 61 55 52 39 36 32 28 41 28 52 52 24 52 43 49 61 52 61 61 61 61 61 61 61 55 55 41 55 49 55 55 55 43 35 47 61 43 55 20 22 12 15 19 23 15 30 7 14 50 35 61 43 55 55 50 36 49 49 55 38 47 55 47 43 50 32 55 49 55 29 37 35 43 41 47 47 47 43 47 43 61 50 53 53 24 32 35 35 25 29 35 53 50 50 29 37 23 53 39 31 24 50 27 39 39 33 24 33 33 38 43 43 53 39 32 53 43 37 50 43 39 50 33 47 42 33 47 38 40 39 31 42 42 27 23 31 24 27 45 23 31 24 24 31 34 34 42 42 31 34 38 27 45 33 25 39 22 25 31 37 30 17 45 53 32 47 47 29 46 34 42 30 43 50 40 36 45 47 28 24 21 25 30 30 47 27 39 50 20 16 12 9 14 27 30 38 20 32 38 27 52 33 52 50 36 19 27 19 19 50 10 15 33 40 28 23 27 27 16 19 53 28 16 17 9 10 14 30 29 13 46 13 30 12 11 14 17 8 10 26 25 52 16 14 10 6 10 14 38 41 10 17 30 42 40 42 46 15 12 15 9 23 22 36 20 25 10 23 37 16 30 34 19 39 16 34 20 16 19 32 36 13 21 18 28 20 20 10 8 11 33 52 10 27 23 29 34 14 7 6 10 21 14 17 16 16 15 14 23 9 20 9 13 12 20 19 17 33 22 24 14 8 11 17 29 15 18 14 17 17 24 19 15 7 20 22 13 25 16 18 53 17 19 17 5 15 21 22 5 10 11

Alignment Information

BAC End 1

BAC End 2

seq1: chr8_91673601_91674285
seq2: B6Ng01-094J15.g_68_755 (reverse)

seq1  CCGCCTTGAAAACTGTC-CCCTAAGCTAGACTTCAGG-ACTCATATGCAG  48
      ||||||||||||||||| || |||||||||||||||| | ||||||||||
seq2  CCGCCTTGAAAACTGTCTCCTTAAGCTAGACTTCAGGAATTCATATGCAG  50

seq1  TGGAAATGTCCCTGTTCATTCTCC-TTTAGGAAGACTCTTCATTGCAGGG  97
      ||| |||||||||| ||||||||| |||||||||||||||||||||||||
seq2  TGG-AATGTCCCTGGTCATTCTCCTTTTAGGAAGACTCTTCATTGCAGGG  99

seq1  ACCAATATATTCTGCTTTGCCTTAAAA-GGTTCTTAGTAGAACAAGTGGG  146
      |||||| ||||||||||| |||||||| ||||||||||||||||||||||
seq2  ACCAATTTATTCTGCTTTCCCTTAAAAGGGTTCTTAGTAGAACAAGTGGG  149

seq1  TACAGCTCAGGTGGAGTGTTTGCGGGGCATGCAGGAGGCCCTGGGTTCTA  196
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGCTCAGGTGGAGTGTTTGCGGGGCATGCAGGAGGCCCTGGGTTCTA  199

seq1  GCACTGGGACTGGAGTGGGGGGAAGCAGATGTAATTATGGGAGCCTGGGT  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGGGACTGGAGTGGGGGGAAGCAGATGTAATTATGGGAGCCTGGGT  249

seq1  TCAACATCTCCAATAAGAAGCTCGAGAATGCTACATCTTAGAGTACTGCA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACATCTCCAATAAGAAGCTCGAGAATGCTACATCTTAGAGTACTGCA  299

seq1  GCCTCGCCTCAGAGAATCCACATCCAAGACAGGACACCTGCTTCGACTGT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCGCCTCAGAGAATCCACATCCAAGACAGGACACCTGCTTCGACTGT  349

seq1  GGGGCTTACAGAAGTAGAAGCATATGGAGTTCCTTGGAAATCTACTCTTT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGCTTACAGAAGTAGAAGCATATGGAGTTCCTTGGAAATCTACTCTTT  399

seq1  GGGAGTCTCAAAACAATTCAATGATGTGCATGACAGTGTTAGGTGATCTA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGTCTCAAAACAATTCAATGATGTGCATGACAGTGTTAGGTGATCTA  449

seq1  CTCTCCACGAACACTTGGTGAGTGTCTTTCTCAATGTCCAGACTAACACC  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCACGAACACTTGGTGAGTGTCTTTCTCAATGTCCAGACTAACACC  499

seq1  TCGTCAAGGCAGGCACCACGTCTTCATGGCCTTCTATCTCTGGCTTCTAG  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTCAAGGCAGGCACCACGTCTTCATGGCCTTCTATCTCTGGCTTCTAG  549

seq1  AAAGTGCCAGGTACTGGGTACTCAGTTTTGGCTGAGTGTGGGCATCTGGA  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTGCCAGGTACTGGGTACTCAGTTTTGGCTGAGTGTGGGCATCTGGA  599

seq1  TAGCAGTATTGAATCTTGGCTTTCTGTGTGTCTTTGGGAAGCACAATTCT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGTATTGAATCTTGGCTTTCTGTGTGTCTTTGGGAAGCACAATTCT  649

seq1  CTCTCCAGACCTCAGTCCCCCCCCACCCCCCTTGAATTC  685
      |||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCAGACCTCAGTCCCCCCCCACCCCCCTTGAATTC  688

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information