BAC Information

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BAC

Clone NameB6Ng01-094M13
Chromosome8 (Build37)
Map Location 53,429,416 - 53,429,926
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC623872, LOC100040220, LOC623935
Downstream gene1190028D05Rik, LOC676688
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-094M13.g
ACCDH905910
length1,068
definitionDH905910|Mus musculus domesticus DNA, BAC clone: B6Ng01-094M13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacatatgatgttgggtactccggtggtttactgcttaggcacac
tgggctccgacactgtgtgtgggactcaatcgctgtctggacattttggg
atactatgagaatactgtgttagggaaagtcaccggtccagccctggaga
agattgccggaagtctccaggtgcttggacacccttatggaagaatacaa
ggaaggattgcagttcatacagggataggaattttgtaggaagattaata
gaatgatgaacgtggacacttggggctctccgagcatgaaccactcacca
acgaatatactgggctggagctaggcttgtctgcacatgtgtagcatatg
tagagcttggacttcatgtgggtattggagagcacttgcatgaactatcc
caacagctgttgcttgtatgtaggatatgttcttctaactggagtttatt
ggctggcctctgagggagaggaaatgcctagcctcccggagacttgaaat
gctgggtgggggataccttggggcccccacctgctcaaaagataaggtga
ggtcgaattggggacgcttcaaagacatgtttcaacaggcactgtacata
tgctcaaaaattgattcagataccaaactattactattgtaaaatcttag
ttaaactatgcttttgtttgtttgtttttttgttttgttttgttttgttt
tgtttattcgagagaagggtttctctgtgtagccctggctgtcctggaac
tcactttgtagaccaggctggcctcgaactcagaaatccgcctgcctctg
cctcccgagtgctgggattaaaggcatgcgccaccatgcccggcctaact
atgcttttttatgtttaatcaatcctcaaatttgaaacatcgaatgtgct
aaatacctatatgtatccgctaatgaaggttatttccttcaagtattaag
tcaatctatagaaaagtgtacgtgatcttcctcatccacttgaatcatcg
ttagattcacttatagctaatttcctcctttgcaaaaaaaatttgacctt
aatgggagaaacctatta
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_53429416_53429926
seq2: B6Ng01-094M13.g_634_1135

seq1  CTTCAAAGACATGTTTCAACAGGCACTGTACATATGCTCAAAAATTGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCAAAGACATGTTTCAACAGGCACTGTACATATGCTCAAAAATTGATT  50

seq1  CAGATACCAAACTATTACTATTGTAAAATCTTAGTTAAACTATGCTTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATACCAAACTATTACTATTGTAAAATCTTAGTTAAACTATGCTTTTG  100

seq1  TTTGTTTGTTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTATTCGAGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTGTTTTTTTGTTTTGTTTTGTTTTGTTTTGTTTATTCGAGAGAA  150

seq1  -GGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAG  199
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTCTCTGTGTAGCCCTGGCTGTCCTGGAACTCACTTTGTAGACCAG  200

seq1  GCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGCCTCGAACTCAGAAATCCGCCTGCCTCTGCCTCCCGAGTGCTGGG  250

seq1  ATTAAAGGCATGCGCCACCATGCCCGGCCTAACTATGCTTTTTTATGTTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAAGGCATGCGCCACCATGCCCGGCCTAACTATGCTTTTTTATGTTT  300

seq1  AATCAATCCTCAAAGTTTGAAACATCGAATGTGCTAAATACCTATATGTA  349
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  AATCAATCCTCAAA-TTTGAAACATCGAATGTGCTAAATACCTATATGTA  349

seq1  TCCGCTAATGAAGGTTATTTTCCTTCAAGTATTAAGTCAATCTATAGAAA  399
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCCGCTAATGAAGGTTA-TTTCCTTCAAGTATTAAGTCAATCTATAGAAA  398

seq1  AGTTGTAACGGTGGATCTT-CTCATTCACTTGTAAATCATCGTTAGTTTC  448
      || ||| |||   |||||| ||||| ||||||  |||||||||||| |||
seq2  AG-TGT-ACG--TGATCTTCCTCATCCACTTG--AATCATCGTTAGATTC  442

seq1  ACTTATAGTTAATTT-CTCTTTTGCATAAATAAAAATTTGAAACTTAAT-  496
      |||||||| |||||| ||| |||||   || ||||||||| | |||||| 
seq2  ACTTATAGCTAATTTCCTCCTTTGC---AAAAAAAATTTG-ACCTTAATG  488

seq1  GGAGAACACCTATTA  511
      |||||| ||||||||
seq2  GGAGAA-ACCTATTA  502