BAC Information

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BAC

Clone NameB6Ng01-095A06
Chromosome15 (Build37)8 (Build37)
Map Location 18,895,529 - 18,896,31852,585,615 - 52,586,654
singlet/doubletsingletsinglet
Overlap geneCdh10
Upstream geneLOC666835, LOC666839
Downstream geneEG666857, EG666875, LOC621884, LOC100040265
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095A06.bB6Ng01-095A06.g
ACCDH906069DH906070
length1,0531,029
definitionDH906069|Mus musculus domesticus DNA, BAC clone: B6Ng01-095A06, 5' end.DH906070|Mus musculus domesticus DNA, BAC clone: B6Ng01-095A06, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(18,895,529 - 18,896,318)(52,585,615 - 52,586,654)
sequence
gaattccagccaactaggtctatacagcgaaaccctgtcttggaaaaaga
aaaaagaaaacaaaagaaacaaaggacaatgtcttatctaaaattttaga
aatctatttggtagattccaaaagccaaaagccatcaccccccttttaaa
tctaggtagcatacatgatgtaaaagttaagccatcttcagtagtccatg
attggctctatctctgatgttcaggttgggaagtataaagggaaagggga
aagagggggaagtggggatatgaatttcagattcctttgctccactgtat
gcctttatctatatctatcaccaaactgtatctaacatttccttaaattg
gtgatttttaaagtccaaagtccctcaattcttcaaggaaaaccaacact
tttgctcctccttctggtactgtgcagaactaagctgaatttggatactt
caggtacttctgtggtgcaagtcacagctacagatgccgatgacccttcc
tatggaaacagcgccagagtcatttacagcatccttcaagggcagcctta
tttctctgtggaaccagaaacaggtcaggagcagtggattgctgtttgcc
gaagttaccatgtttgtgatctttgcaagtataaggtggagaacaaaaat
aaatactaagcattggggagtgggacataaggtataattttcagtagata
tacgtgttgtttttacagaacatgaacctaaacgccaacaatttgtctaa
aacaacagtagatcccagaaacccttcttgctgtgcattcccaccccact
ccccagctgggttagcaggaccttgctgccattatttggtagctggagga
tggaggcctttgtgttcacatgaatcttgcccctactagatctatggtcc
acccggagtggtttattgttaaatcttaatatgtaagtgttgagctatta
gaattgatatgtttgaaattttataagtttagctattcagggcatggaac
tactaggagaatagcagcaaacaaacactgaggattgccatgaaattagt
tcc
gaattcattgtttgattaacattgtctccctccactgacacactttcttt
cattcactgagtctactagtgttactttccacagtgatttttttattatt
taatttattaatagtctaatgtgaggagtgtttttgtgtgttgaaatctc
aattacttggctccattattctcctgtgttgctgatccctgaacattgcc
cgtttttctatccattttgcattgactctgtttctgattttccttttcat
gttctggcttgcattcctttggttatttgccatctcttcaggatccccga
ttattctttactagtgaattgtactcattcatcactctgcattttggctc
tagttgaaatcactaattggagaattatgagatttggggagggggaagtc
atgttattccctcttctctcattcctatgtttttaattttgtttgtattc
cttgcttgtgttttcttccaagtcttttttgtgcatattcttactgagcc
ctcttctcttgaaggcgtgataccaaggaccataaggaagaaaataaact
gactttggaaggagcatccatttcttactggtatattgcttctgtttttt
ctatacattttaggatgttcctttgattcattgatggatatgtagcctta
atctcaacgttctctttagaacctagtcatagtcccccgtgttctgactt
tctcattcaccaaagaatcaacttctggttcatcatttcacactgaatca
gattttcttgatcatttttattttatatgttgatttaattaaattgtaca
tttcctccaacagttgccaccagtgtgatgcataattagtcaaaacatgg
gccttatctgaagaaaaaactcttattattcattaatcatttagatgaaa
taggggtgtatatgaattatgaccttgtcattataaaacagagggtatat
gggctcttcaataggtatattaaaggaagaaagcttcctattattaaagt
tttctagttacttattatcaaggtgtaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr15_18895529_18896318
seq2: B6Ng01-095A06.b_308_1090

seq1  TGAATTTCAGATTCCTTTGCAACACTGTATGCCTTTATCTATATCTATCA  50
      ||||||||||||||||||||  ||||||||||||||||||||||||||||
seq2  TGAATTTCAGATTCCTTTGCTCCACTGTATGCCTTTATCTATATCTATCA  50

seq1  CCAAACTGTATCTAACAGTTCCTTAAAGTGGTCATTTTTAAAGTCAAAAG  100
      ||||||||||||||||| ||||||||| |||| |||||||||||| ||||
seq2  CCAAACTGTATCTAACATTTCCTTAAATTGGTGATTTTTAAAGTCCAAAG  100

seq1  TCACTCAAGTCTTCAATGAAAACAAGCACTTTTGCTCCTCCTTCTGGTAC  150
      || ||||| ||||||| |||||| | ||||||||||||||||||||||||
seq2  TCCCTCAATTCTTCAAGGAAAACCAACACTTTTGCTCCTCCTTCTGGTAC  150

seq1  TGTGCAGAACTAAGCTGAATTTGGATACTTCAGGTACTTCTGTGGTGCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGCAGAACTAAGCTGAATTTGGATACTTCAGGTACTTCTGTGGTGCAA  200

seq1  GTCACAGCTACAGATGCCGATGACCCTTCCTATGGAAACAGCGCCAGAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAGCTACAGATGCCGATGACCCTTCCTATGGAAACAGCGCCAGAGT  250

seq1  CATTTACAGCATCCTTCAAGGGCAGCCTTATTTCTCTGTGGAACCAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTACAGCATCCTTCAAGGGCAGCCTTATTTCTCTGTGGAACCAGAAA  300

seq1  CAGGTCAGGAGCAGTGGATTGCTGTTTGCCGAAGTTACCATGTTTGTGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTCAGGAGCAGTGGATTGCTGTTTGCCGAAGTTACCATGTTTGTGAT  350

seq1  CTTTGCAAGTATAAGGTGGAGAACAAAAATAAATACTAAGCATT-GGGAG  399
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTTTGCAAGTATAAGGTGGAGAACAAAAATAAATACTAAGCATTGGGGAG  400

seq1  TGGGACATAAGGTATAATTTTCAGTAGATATACGTGTTGTTTTTACAGAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACATAAGGTATAATTTTCAGTAGATATACGTGTTGTTTTTACAGAA  450

seq1  CATGAACCTAAACGCCAACAATTTGTCT-AAACAACAGTAGATCCCAGAA  498
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CATGAACCTAAACGCCAACAATTTGTCTAAAACAACAGTAGATCCCAGAA  500

seq1  ACCCTTC-TGCTGTGCA-TCCCACCCCACTCCCCAGCTGGGTTAGCAGGA  546
      ||||||| ||||||||| ||||||||||||||||||||||||||||||||
seq2  ACCCTTCTTGCTGTGCATTCCCACCCCACTCCCCAGCTGGGTTAGCAGGA  550

seq1  CCTTGCTGCCATTATTTGGTAGCT-GAGGATGGAGGTCTTTGTGTTTCTA  595
      |||||||||||||||||||||||| ||||||||||| |||||||||   |
seq2  CCTTGCTGCCATTATTTGGTAGCTGGAGGATGGAGGCCTTTGTGTT--CA  598

seq1  CATGAATCTTGTCACTTACTAAGATCTAT-GTTCAACCTGAGTGTTATAT  644
      ||||||||||| | | |||| |||||||| || || || ||||| | |||
seq2  CATGAATCTTG-CCCCTACT-AGATCTATGGTCCACCCGGAGTGGTTTAT  646

seq1  AGTTAAAATCTTAAATATGTAAGTGATTGAGCTAATAGAAATAGATATGT  694
       ||| ||||||| |||||||||||| |||||||| ||| ||| |||||||
seq2  TGTT-AAATCTT-AATATGTAAGTG-TTGAGCTATTAG-AATTGATATGT  692

seq1  TTGAGATTTTATATGTTTAGCGTACTCTAGGGCATATGATACTACTAGGA  744
      |||| |||||||| ||||||| || || |||||  |||  ||||||||||
seq2  TTGAAATTTTATAAGTTTAGC-TATTC-AGGGC--ATGGAACTACTAGGA  738

seq1  G-ATAGCAAGCAAAACAAACACTGAGGATTGACATGAAATTAGTTTC  790
      | ||||| ||| ||||||||||||||||||| ||||||||||||| |
seq2  GAATAGC-AGC-AAACAAACACTGAGGATTGCCATGAAATTAGTTCC  783

seq1: chr8_52585615_52586654
seq2: B6Ng01-095A06.g_66_1093

seq1  GAATTCAGTGTTTGATTAACATTGTCTCCCTCCACTGACACACTTTCTTT  50
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGTTTGATTAACATTGTCTCCCTCCACTGACACACTTTCTTT  50

seq1  CATTCACTGAGTCTACTAGTGTTACTTTCCACAGTGATTTTTTTATTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCACTGAGTCTACTAGTGTTACTTTCCACAGTGATTTTTTTATTATT  100

seq1  TAATTTATTAATAGTCTAATGTGAGGAGTGTTTTTGTGTGTTGAAATCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTTATTAATAGTCTAATGTGAGGAGTGTTTTTGTGTGTTGAAATCTC  150

seq1  AATTACTTGGCTCCATTATTCTCCTGTGTTGCTGATCCCTGAACATTGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTTGGCTCCATTATTCTCCTGTGTTGCTGATCCCTGAACATTGCC  200

seq1  CGTTTTTCTATCCATTTTGCATTGACTCTGTTTCTGATTTTCCTTTTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTTTTCTATCCATTTTGCATTGACTCTGTTTCTGATTTTCCTTTTCAT  250

seq1  GTTCTGGCTTGCATTCCTTTGGTTATTTGCCATCTCTTCAGGATCCCCGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGGCTTGCATTCCTTTGGTTATTTGCCATCTCTTCAGGATCCCCGA  300

seq1  TTATTCTTTACTAGTGAATTGTAGTCATTCATCACTCTGCATTTTGGCTC  350
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTATTCTTTACTAGTGAATTGTACTCATTCATCACTCTGCATTTTGGCTC  350

seq1  TAGTTGAAATCACTAATTGGAGAATTATGAGATTTGGGGAGGGGGAAGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTGAAATCACTAATTGGAGAATTATGAGATTTGGGGAGGGGGAAGTC  400

seq1  ATGTTATTCCATCTTCTCTCATTCCTATGTTTTTAATTTTGTTTGTATTC  450
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATTCCCTCTTCTCTCATTCCTATGTTTTTAATTTTGTTTGTATTC  450

seq1  CTTGCTTGTGTTTTCTTCCAAGTCTTTTTTGTGCATATTCTTACTGAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCTTGTGTTTTCTTCCAAGTCTTTTTTGTGCATATTCTTACTGAGCC  500

seq1  CTCTTCTCTTGAAGGCGTGATACCAAGGACCATAAGGAAGAAAATAAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTCTTGAAGGCGTGATACCAAGGACCATAAGGAAGAAAATAAACT  550

seq1  GACTTTGGAAGGAGCATCCATTTCTTACTGGTATATTGCTTCTGTTTTTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTGGAAGGAGCATCCATTTCTTACTGGTATATTGCTTCTGTTTTTT  600

seq1  CTATACATTTTAGGATGTTCCTTTGATTCATTGATGGATATGTAGCCTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATACATTTTAGGATGTTCCTTTGATTCATTGATGGATATGTAGCCTTA  650

seq1  ATCTCAACGTTCTCTTTAGAACCTAGTCATAGTCCCCCGTGTTCTGACTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAACGTTCTCTTTAGAACCTAGTCATAGTCCCCCGTGTTCTGACTT  700

seq1  TCTCATTCACCAAAGAATCAACTTCTGGTTCATCATTTCACACTGAATCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATTCACCAAAGAATCAACTTCTGGTTCATCATTTCACACTGAATCA  750

seq1  GATTTTCTTGATCATTTTTATTTTATATGTTGATATTAATTAAATTGTAC  800
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GATTTTCTTGATCATTTTTATTTTATATGTTGAT-TTAATTAAATTGTAC  799

seq1  ATTTCCTCCAACAGTTGCCACCAGTGTGATGCATAATTAGTCAAAACAT-  849
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATTTCCTCCAACAGTTGCCACCAGTGTGATGCATAATTAGTCAAAACATG  849

seq1  GGCCTTATCTGAAGAAAAAAACTCTTATTTATTCAATTAATTCAATTTAG  899
      |||||||||||||| |||||||||||| |||||| ||||||   ||||||
seq2  GGCCTTATCTGAAG-AAAAAACTCTTA-TTATTC-ATTAAT--CATTTAG  894

seq1  ATGAAATTAGGGGTGTATATGAATTATGACCTTGTCATTTATAAAACAGA  949
      |||||| |||||||||||||||||||||||||||||| ||||||||||||
seq2  ATGAAA-TAGGGGTGTATATGAATTATGACCTTGTCA-TTATAAAACAGA  942

seq1  GGGTATATGGGCTCTTTCATATGGTATAATTTAAGGAAAGAAAAGCTTCC  999
      ||||||||||||||||  ||| ||||| ||| ||||||   |||||||||
seq2  GGGTATATGGGCTCTTCAATA-GGTAT-ATTAAAGGAA--GAAAGCTTCC  988

seq1  TATTATTAAAGTTTTCTAGTTTACTAATTATCAAAGTGTAA  1040
      ||||||||||||||||||| ||||| |||||||| ||||||
seq2  TATTATTAAAGTTTTCTAG-TTACTTATTATCAAGGTGTAA  1028