BAC Information

Click to search

BAC

Clone NameB6Ng01-095E07
Chromosome8 (Build37)
Map Location 52,557,655 - 52,558,825
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039966, LOC667517
Downstream geneLOC623872, LOC100040220, LOC623935, 1190028D05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095E07.bB6Ng01-095E07.g
ACCDH906255DH906256
length1,2681,149
definitionDH906255|Mus musculus domesticus DNA, BAC clone: B6Ng01-095E07, 5' end.DH906256|Mus musculus domesticus DNA, BAC clone: B6Ng01-095E07, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataaattagaaaggaagataacaatacaaaaattcaaggaatc
taagagctggttctttgaggaaatcaacaagatagacaaaccattagcca
aactaagtaaatggcagagaggcagaatccaaattaacaaaatcagaaat
gaaagggtacaaaacaaagatactgaggaaattcaaaaatcattagattt
tacttcaaaagcctgtgctataaaaattggaaagtttaaatgaaattgat
gattttttagatacatatcatttaccaatattaaatcagtatcaagtaaa
ctatttaaatagtcctataaaccctaatgaaatagaagcagtcatgaaag
tctcccagccaaaaaaatcccaggaccagttggttttagcggagaattct
accagattttcaaagacattcttacaccaataatctttaaactatttcac
aaactagaaacaaaaggggtattgccaaactcattctatcagagcacagt
aacaattatacctaaaccacacaaagagtaaacaaagaaaaaattcagga
caatttcccttaaaacattgatgaaaaacaaaaaacaaaaaaaaaattaa
aatcaagaactcatcaaaaatattatcctgtataatcaagtaggcttcat
gccttggatgcaggggtgattaagtaagtgaaaatgaatcaatatcatct
accatataaacaaacttaaaaaaatgatatgatcatcataatagctgctg
aaaagttctttgacaaaaccagcatacttccttttaaaattcttggatag
ttcagatattcaagaggccgacttattcacaataaaggcaatatacacag
caaataatagttgtcttagttagggcttgtatttctgcataaaacatcat
gaccaagaagcaagttagggaggaaagggtttattcagcttacacttgca
cattgctgttctttaccaaagaatcaggcagaattcacacaagcagaaac
ttgaagacagagatgatgcagagccctgaagggtgctgcttactggattg
ctttccaggctgctcagctgctttcttgtagaacccaggactacagccag
atgcaccactccagttgcatctcactcttgatcactaatgagaaagtctt
aagctgatccattgatctatttcctcagagtcttttcggtgctacctcag
ctgtcaagttgaacaaacagctagacacataccttgttacactcttgtgt
atcaccaaaacactacct
gaattctgggtatttttctcggtattgcattgatttttatggatttatta
tttgacaaatttgtatcagaacatagtccattctgtttacattcatgtcc
ctgtgacttcttccttcttgccttgggtctcttcccatcactcatgcctt
tatactttgttctgtgatgcactaatttaatcaggagttctgtaaatcca
tggatagaatttccatttagtaaacaagtaaaggcaatgactgtggattg
ctagactctttcatttgtcaactcttcttaagagagggttaggaccccat
ttatgccctgcaacccatgattagatactgataggccaattcatatgaag
gccagatattagtatggagatcagattttcagtggcattgttaatgccct
gaatataacatttcagtcattacctttggttttcacccttaaaatctttc
tgtttcctcttccccaatgtttcttgaaccttagagaggtacaacttttt
gcttagggcagagttttagtctgcagtttattctaagtatctcaaacaag
gataagtctctgtattcatcatgcttctttgcaatgtgtagtttctctta
ctaaaaattaaactaacacttgtccaggggtaaaaacataactacttaga
ggtcagctttctgccagtttagcttagccaaagtgcttagttctacctct
gaccagaaaggcaaggttttcaagtaatttatttatcagtcatttatttc
catgtggaatgggcctcaaatccagtcatggaaagatgggccacatgaat
ggatgtaaaaataaataaatgaagtcctggtcaagaaatcgagaacaaca
cagaaatgttattcggaaagacagagaaacacgggtgtaaaaagtaagga
cactaaacacattaggccaatttataacctcattatcattatcggagtag
aatgagagttcacagtcttcatttcatgagttcatccattgactactgat
atagtgccaaataaaattcatgttctaagtagctcttgaagcagatggat
ataatatacatatttttgtggagagagttacaaaatgtcatgttagaagg
aaaaataaaacagatttggcaaaggtgagtcttcaaaaatcgtttttag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_52557655_52558825
seq2: B6Ng01-095E07.g_67_1215 (reverse)

seq1  CTAAAAACGATTTTTGAAGACTCACTTTTGCCAAATACTGTTTTATCTCT  50
      ||||||||||||||||||||||||| |||||||||| ||||||||| | |
seq2  CTAAAAACGATTTTTGAAGACTCACCTTTGCCAAAT-CTGTTTTAT-TTT  48

seq1  TCCTTCTATATCATGACATTTTTGTACTCTCTCCAC-AAAATATGTATTA  99
      ||||||  || |||||||||||   ||||||||||| |||||||||| ||
seq2  TCCTTC--TAACATGACATTTTGTAACTCTCTCCACAAAAATATGTA-TA  95

seq1  TTATATCCATCCTGCTTTCAAAGAAGCTAACTTTAGAACAATGAAATTTT  149
      |||||||||| |||| |||||   |||||   ||||||| ||| ||||||
seq2  TTATATCCAT-CTGC-TTCAA--GAGCTA--CTTAGAAC-ATG-AATTTT  137

seq1  ATTTGGCACTATTAATTCAAGTAGTCAATGGATGAACTCATGAAATTGAA  199
      ||||||||||||  ||   |||||||||||||||||||||||||| ||||
seq2  ATTTGGCACTAT--AT--CAGTAGTCAATGGATGAACTCATGAAA-TGAA  182

seq1  GACTGTTGAACTCTCATTTCTACTCCGATAATGATAATGAGGTTATAAAT  249
      ||||| |||||||||| |||||||||||||||||||||||||||||||||
seq2  GACTG-TGAACTCTCA-TTCTACTCCGATAATGATAATGAGGTTATAAAT  230

seq1  TGGCCTAATGTTGTTTTAGTTGTCCTTACTTTTTACACCCGTGTTTCTCT  299
      |||||||||||   ||||| ||||||||||||||||||||||||||||||
seq2  TGGCCTAATGT--GTTTAG-TGTCCTTACTTTTTACACCCGTGTTTCTCT  277

seq1  GTCTTTCCGAATAACATTTCTGTGTTGTTCTCGATTTCTTGACCAGGACT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTTCCGAATAACATTTCTGTGTTGTTCTCGATTTCTTGACCAGGACT  327

seq1  TCATTTATTTATTTTTACATCCATTCATGTGGCCCATCTTTCCATGACTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTATTTATTTTTACATCCATTCATGTGGCCCATCTTTCCATGACTG  377

seq1  GATTTGAGGCCCATTCCACATGGAAATAAATGACTGATAAATAAATTACT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGAGGCCCATTCCACATGGAAATAAATGACTGATAAATAAATTACT  427

seq1  TGAAAACCTTGCCTTTCTGGTCAGAGGTAGAACTAAGCACTTTGGCTAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAACCTTGCCTTTCTGGTCAGAGGTAGAACTAAGCACTTTGGCTAAG  477

seq1  CTAAACTGGCAGAAAGCTGACCTCTAAGTAGTTATGTTTTTACCCCTGGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACTGGCAGAAAGCTGACCTCTAAGTAGTTATGTTTTTACCCCTGGA  527

seq1  CAAGTGTTAGTTTAATTTTTAGTAAGAGAAACTACACATTGCAAAGAAGC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGTTAGTTTAATTTTTAGTAAGAGAAACTACACATTGCAAAGAAGC  577

seq1  ATGATGAATACAGAGACTTATCCTTGTTTGAGATACTTAGAATAAACTGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGAATACAGAGACTTATCCTTGTTTGAGATACTTAGAATAAACTGC  627

seq1  AGACTAAAACTCTGCCCTAAGCAAAAAGTTGTACCTCTCTAAGGTTCAAG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAAAACTCTGCCCTAAGCAAAAAGTTGTACCTCTCTAAGGTTCAAG  677

seq1  AAACATTGGGGAAGAGGAAACAGAAAGATTTTAAGGGTGAAAACCAAAGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATTGGGGAAGAGGAAACAGAAAGATTTTAAGGGTGAAAACCAAAGG  727

seq1  TAATGACTGAAATGTTATATTCAGGGCATTAACAATGCCACTGAAAATCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGACTGAAATGTTATATTCAGGGCATTAACAATGCCACTGAAAATCT  777

seq1  GATCTCCATACTAATATCTGGCCTTCATATGAATTGGCCTATCAGTATCT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCCATACTAATATCTGGCCTTCATATGAATTGGCCTATCAGTATCT  827

seq1  AATCATGGGTTGCAGGGCATAAATGGGGTCCTAACCCTCTCTTAAGAAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCATGGGTTGCAGGGCATAAATGGGGTCCTAACCCTCTCTTAAGAAGA  877

seq1  GTTGACAAATGAAAGAGTCTAGCAATCCACAGTCATTGCCTTTACTTGTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACAAATGAAAGAGTCTAGCAATCCACAGTCATTGCCTTTACTTGTT  927

seq1  TACTAAATGGAAATTCTATCCATGGATTTACAGAACTCCTGATTAAATTA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAAATGGAAATTCTATCCATGGATTTACAGAACTCCTGATTAAATTA  977

seq1  GTGCATCACAGAACAAAGTATAAAGGCATGAGTGATGGGAAGAGACCCAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCATCACAGAACAAAGTATAAAGGCATGAGTGATGGGAAGAGACCCAA  1027

seq1  GGCAAGAAGGAAGAAGTCACAGGGACATGAATGTAAACAGAATGGACTAT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAAGAAGGAAGAAGTCACAGGGACATGAATGTAAACAGAATGGACTAT  1077

seq1  GTTCTGATACAAATTTGTCAAATAATAAATCCATAAAAATCAATGCAATA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTGATACAAATTTGTCAAATAATAAATCCATAAAAATCAATGCAATA  1127

seq1  CCGAGAAAAATACCCAGAATTC  1171
      ||||||||||||||||||||||
seq2  CCGAGAAAAATACCCAGAATTC  1149