BAC Information

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BAC

Clone NameB6Ng01-095E08
Chromosome8 (Build37)
Map Location 52,557,717 - 52,558,825
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039966, LOC667517
Downstream geneLOC623872, LOC100040220, LOC623935, 1190028D05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095E08.bB6Ng01-095E08.g
ACCDH906257DH906258
length1,2431,100
definitionDH906257|Mus musculus domesticus DNA, BAC clone: B6Ng01-095E08, 5' end.DH906258|Mus musculus domesticus DNA, BAC clone: B6Ng01-095E08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaataaattagaaaggaagataacaatacaaaaattcaaggaatc
taagagctggttctttgaggaaatcaacaagatagacaaaccattagcca
aactaagtaaatggcagagaggcagaatccaaattaacaaaatcagaaat
gaaagggtacaaaacaaagatactgaggaaattcaaaaatcattagattt
tacttcaaaagcctgtgctataaaaattggaaagtttaaatgaaattgat
gattttttagatacatatcatttaccaatattaaatcagtatcaagtaaa
ctatttaaatagtcctataaaccctaatgaaatagaagcagtcatgaaag
tctcccagccaaaaaaatcccaggaccagttggttttagcggagaattct
accagattttcaaagacattcttacaccaataatctttaaactatttcac
aaactagaaacaaaaggggtattgccaaactcattctatcagagcacagt
aacaattatacctaaaccacacaaagagtaaacaaagaaaaaattcagga
caatttcccttaaaacattgatgaaaaacaaaaaacaaaaaaaaaattaa
aatcaagaactcatcaaaaatattatcctgtataatcaagtaggcttcat
gccttggatgcaggggtgattaagtaagtgaaaatgaatcaatatcatct
accatataaacaaacttaaaaaaatgatatgatcatcataatagctgctg
aaaagttctttgacaaaaccagcatacttccttttaaaattcttggatag
ttcagatattcaagaggccgacttattcacaataaaggcaatatacacag
caaataatagttgtcttagttagggcttgtatttctgcataaaacatcat
gaccaagaagcaagttagggaggaaagggtttattcagcttacacttgca
cattgctgttctttaccaaagaaatcaggcagaattcacacaagcagaaa
cttgaagacagagatgatgcagagccctgagggtgctgcttactgatgct
ttccagctgctcagctgcttcttgtagacccaggactacagccaggatgc
accactcacagttgcattctcatctgatcctaattgaagaaggtctttag
ctgatctcattgatctaattctctcagaaggtcttctgtgtcactcagct
ggtcagttaacaagacaagtgacaacataccttgactgtgtac
gaattctgggtatttttctcggtattgcattgatttttatggatttatta
tttgacaaatttgtatcagaacatagtccattctgtttacattcatgtcc
ctgtgacttcttccttcttgccttgggtctcttcccatcactcatgcctt
tatactttgttctgtgatgcactaatttaatcaggagttctgtaaatcca
tggatagaatttccatttagtaaacaagtaaaggcaatgactgtggattg
ctagactctttcatttgtcaactcttcttaagagagggttaggaccccat
ttatgccctgcaacccatgattagatactgataggccaattcatatgaag
gccagatattagtatggagatcagattttcagtggcattgttaatgccct
gaatataacatttcagtcattacctttggttttcacccttaaaatctttc
tgtttcctcttccccaatgtttcttgaaccttagagaggtacaacttttt
gcttagggcagagttttagtctgcagtttattctaagtatctcaaacaag
gataagtctctgtattcatcatgcttctttgcaatgtgtagtttctctta
ctaaaaattaaactaacacttgtccaggggtaaaaacataactacttaga
ggtcagctttctgccagtttagcttagccaaagtgcttagttctacctct
gaccagaaaggcaaggttttcaagtaatttatttatcagtcatttatttc
catgtggaatgggcctcaaatccagtcatggaaagatgggccacatgaat
ggatgtaaaataaataaatgaagtcctggtcaagaaatcgagaacaacac
agaaatgttattcggaaagacagagaaacacgggtgtaaaagtaaggaca
actaaaacaacattaggccatttataacctcattatcattatcggagtag
aatgagagttcaacagtctcaatttcatgagttcatccattgactactga
ataatagtgccaaataaaatttcatgtctaaagtagcttcttgaaagcag
gatggaaataaataataaatatttttgtggagagagatcaaaaatttcat

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_52557717_52558825
seq2: B6Ng01-095E08.g_68_1167 (reverse)

seq1  ATGACATTTTTGTACTCTCTCCAC-AAAATATGTATTA-TTATATCCATC  48
      |||| |||||||  |||||||||| ||||||| ||||| |||| ||||||
seq2  ATGAAATTTTTGATCTCTCTCCACAAAAATATTTATTATTTATTTCCATC  50

seq1  CTGCTTTCAAAGAAGCTAACTTTAGAACAATGAAATTTTATTTGGCACTA  98
      |||||||| |||||||| ||||||||   |||||||||||||||||||||
seq2  CTGCTTTC-AAGAAGCT-ACTTTAGA--CATGAAATTTTATTTGGCACTA  96

seq1  TTAATTCAAGTAGTCAATGGATGAACTCATGAAATTGAAGACTGTTGAAC  148
      || |||| ||||||||||||||||||||||||||||| ||||||||||||
seq2  TT-ATTC-AGTAGTCAATGGATGAACTCATGAAATTG-AGACTGTTGAAC  143

seq1  TCTCATTTCTACTCCGATAATGATAATGAGGTTATAAATTGGCCTAATGT  198
      ||||| |||||||||||||||||||||||||||||||| |||||||||||
seq2  TCTCA-TTCTACTCCGATAATGATAATGAGGTTATAAA-TGGCCTAATGT  191

seq1  TGTTTTAGTTGTCCTTACTTTTTACACCCGTGTTTCTCTGTCTTTCCGAA  248
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGTTTTAGTTGTCCTTAC-TTTTACACCCGTGTTTCTCTGTCTTTCCGAA  240

seq1  TAACATTTCTGTGTTGTTCTCGATTTCTTGACCAGGACTTCATTTATTTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTTCTGTGTTGTTCTCGATTTCTTGACCAGGACTTCATTTATTTA  290

seq1  TTTTTACATCCATTCATGTGGCCCATCTTTCCATGACTGGATTTGAGGCC  348
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTTTACATCCATTCATGTGGCCCATCTTTCCATGACTGGATTTGAGGCC  339

seq1  CATTCCACATGGAAATAAATGACTGATAAATAAATTACTTGAAAACCTTG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCACATGGAAATAAATGACTGATAAATAAATTACTTGAAAACCTTG  389

seq1  CCTTTCTGGTCAGAGGTAGAACTAAGCACTTTGGCTAAGCTAAACTGGCA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCTGGTCAGAGGTAGAACTAAGCACTTTGGCTAAGCTAAACTGGCA  439

seq1  GAAAGCTGACCTCTAAGTAGTTATGTTTTTACCCCTGGACAAGTGTTAGT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGCTGACCTCTAAGTAGTTATGTTTTTACCCCTGGACAAGTGTTAGT  489

seq1  TTAATTTTTAGTAAGAGAAACTACACATTGCAAAGAAGCATGATGAATAC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATTTTTAGTAAGAGAAACTACACATTGCAAAGAAGCATGATGAATAC  539

seq1  AGAGACTTATCCTTGTTTGAGATACTTAGAATAAACTGCAGACTAAAACT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGACTTATCCTTGTTTGAGATACTTAGAATAAACTGCAGACTAAAACT  589

seq1  CTGCCCTAAGCAAAAAGTTGTACCTCTCTAAGGTTCAAGAAACATTGGGG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCCTAAGCAAAAAGTTGTACCTCTCTAAGGTTCAAGAAACATTGGGG  639

seq1  AAGAGGAAACAGAAAGATTTTAAGGGTGAAAACCAAAGGTAATGACTGAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAAACAGAAAGATTTTAAGGGTGAAAACCAAAGGTAATGACTGAA  689

seq1  ATGTTATATTCAGGGCATTAACAATGCCACTGAAAATCTGATCTCCATAC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATATTCAGGGCATTAACAATGCCACTGAAAATCTGATCTCCATAC  739

seq1  TAATATCTGGCCTTCATATGAATTGGCCTATCAGTATCTAATCATGGGTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATCTGGCCTTCATATGAATTGGCCTATCAGTATCTAATCATGGGTT  789

seq1  GCAGGGCATAAATGGGGTCCTAACCCTCTCTTAAGAAGAGTTGACAAATG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGGGCATAAATGGGGTCCTAACCCTCTCTTAAGAAGAGTTGACAAATG  839

seq1  AAAGAGTCTAGCAATCCACAGTCATTGCCTTTACTTGTTTACTAAATGGA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTCTAGCAATCCACAGTCATTGCCTTTACTTGTTTACTAAATGGA  889

seq1  AATTCTATCCATGGATTTACAGAACTCCTGATTAAATTAGTGCATCACAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTATCCATGGATTTACAGAACTCCTGATTAAATTAGTGCATCACAG  939

seq1  AACAAAGTATAAAGGCATGAGTGATGGGAAGAGACCCAAGGCAAGAAGGA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGTATAAAGGCATGAGTGATGGGAAGAGACCCAAGGCAAGAAGGA  989

seq1  AGAAGTCACAGGGACATGAATGTAAACAGAATGGACTATGTTCTGATACA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTCACAGGGACATGAATGTAAACAGAATGGACTATGTTCTGATACA  1039

seq1  AATTTGTCAAATAATAAATCCATAAAAATCAATGCAATACCGAGAAAAAT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTCAAATAATAAATCCATAAAAATCAATGCAATACCGAGAAAAAT  1089

seq1  ACCCAGAATTC  1109
      |||||||||||
seq2  ACCCAGAATTC  1100