BAC Information

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BAC

Clone NameB6Ng01-095M22
Chromosome8 (Build37)
Map Location 102,367,710 - 102,505,546
singlet/doubletdoublet
Overlap genenone
Upstream geneCdh8, A330008L17Rik, LOC667531
Downstream geneLOC100042069, LOC436054, LOC100042078, LOC100042086, LOC100042092, LOC384895
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095M22.bB6Ng01-095M22.g
ACCDH906645DH906646
length1,014897
definitionDH906645|Mus musculus domesticus DNA, BAC clone: B6Ng01-095M22, 5' end.DH906646|Mus musculus domesticus DNA, BAC clone: B6Ng01-095M22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(102,367,710 - 102,368,601)(102,504,551 - 102,505,546)
sequence
gaattctagatagggaaggggatacaggaggaattggaattgttaagagg
tgtattggagtaatagatatccagtgttcatgtatgaagtcttcaaacct
taaactataaaatacaaatctactaaaaatgaaaaacaatttaaaaaatt
aaaacataactttgaagggtttgaaaaaaaatctcagtcctgttaggctt
ttaaaatatatactaggttttgaaataccagcagaccaagtagtgtccac
acagtaacttagcaaggctagaatgtctttcctggagtacctgattcttt
ctttgacattggattcattcaactctgtacattggaatggtatcagaaac
tccagctactatgtgagggattaaaaccccaaggtctgaccttcaaggaa
ctccacataaaaccagagacagtgaaacttatagaggagaaaatggggaa
aagcctcgaagagatgggcacaggggaaaaattcctgaatagaacagcaa
tggcttgtgctgtaagatcaattattgacaagtgggacctcataaaattg
caaagcttctgtaaggcaaaggacaccgtcaataagacaaaaaggccacc
aacagactgggaaaggatctttacctatcctaaatcagataggggactaa
tatctaatatatataaagaactcatgaagatggactccagaaaatcagat
aaccccattaaaaatggggctcagagctaaacaaagaattctcacctgag
gaataccaaatagctgagaagcacttgaaaaaatgttcagcattcttaat
catcagggaactgcaaatcaaaaaaccctgagattccatctcacaccagt
cagaatggctaagataaaaattcacgtgacagcagatgctggcgaggatg
tggagaaaaggaacactcctccattgctggtgggattgcaagcttgtaca
acccctctggaaatcagtctggtggttcctcagaaaattggacatagtac
tacccgaggatccc
gaattccaaagacagtttagataacttatttgcaaggtttgtttcctact
aaatatgaggataagggtcatacttgattctttctttctctctctcttcc
tttctttctttctttctttctttctttctttctttctttctttcttcctt
ccttccttccttcctttctttctttctttctttctttctttctttctttc
tttctttctttttttctttctttcatattcaaatatcaggttattgccta
ggagaaaattctcatttaagtataatgtttttaatgaatagattagggag
tgaatacgtgattagatgcatgaatgacattgaagacaggaaggaaagga
cattcagtgagagagggtgagacatatcacaagaataaactaatttcata
taccgatatgtatgaggccataattgaaaagttaaggtgctggattatga
gctggcatgggaattgcatttggaatcatatagtatgagtgtatcagtct
gaataaaagagttagccagttgacataacactcagagattaatttggaga
attcttttgttcttaacaagccttcacctgtagaagaagttgacttctta
ataatctgaacagacatagaatgatggtctgctgtcacatgaactcactc
acctgctgcttgcagatggtgactcctgcttgagtgtaattatagtgtca
cttcctgactgtagcatgtctgtgtagcattgatacacatctgatctcat
ctcattaggacaatgacagagcagaagagccagtgcatcgactgactatg
tcaagtccagcagagtgctactacttgcatttcatgcatcattgcatgtg
cttatatcatctagcatactgcaatgcacatcacgatgcatctgcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_102367710_102368601
seq2: B6Ng01-095M22.b_50_940

seq1  GAATTCTAGATAGGGAAGGGGATACAGGAGGAATTGGAATTGTTAAGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGATAGGGAAGGGGATACAGGAGGAATTGGAATTGTTAAGAGG  50

seq1  TGTATTGGAGTAATAGATATCCAGTGTTCATGTATGAAGTCTTCAAACCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTGGAGTAATAGATATCCAGTGTTCATGTATGAAGTCTTCAAACCT  100

seq1  TAAACTATAAAATACAAATCTACTAAAAATGAAAAACAATTTAAAAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACTATAAAATACAAATCTACTAAAAATGAAAAACAATTTAAAAAATT  150

seq1  AAAACATAACTTTGAAGGGTTTGAAAAAAAATCTCAGTCCTGTTAGGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACATAACTTTGAAGGGTTTGAAAAAAAATCTCAGTCCTGTTAGGCTT  200

seq1  TTAAAATATATACTAGGTTTTGAAATACCAGCAGACCAAGTAGTGTCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATATATACTAGGTTTTGAAATACCAGCAGACCAAGTAGTGTCCAC  250

seq1  ACAGTAACTTAGCAAGGCTAGAATGTCTTTCCTGGAGTACCTGATTCTTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTAACTTAGCAAGGCTAGAATGTCTTTCCTGGAGTACCTGATTCTTT  300

seq1  CTTTGACATTGGATTCATTCAACTCTGTACATTGGAATGGTATCAGAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACATTGGATTCATTCAACTCTGTACATTGGAATGGTATCAGAAAC  350

seq1  TCCAGCTACTATGTGAGGGATTAAAACCCCAAGGTCTGACCTTCAAGGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGCTACTATGTGAGGGATTAAAACCCCAAGGTCTGACCTTCAAGGAA  400

seq1  CTCCACATAAAACCAGAGACAGTGAAACTTATAGAGGAGAAAATGGGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACATAAAACCAGAGACAGTGAAACTTATAGAGGAGAAAATGGGGAA  450

seq1  AAGCCTCGAAGAGATGGGCACAGGGGAAAAATTCCTGAATAGAACAGCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTCGAAGAGATGGGCACAGGGGAAAAATTCCTGAATAGAACAGCAA  500

seq1  TGGCTTGTGCTGTAAGATCAATTATTGACAAGTGGGACCTCATAAAATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGTGCTGTAAGATCAATTATTGACAAGTGGGACCTCATAAAATTG  550

seq1  CAAAGCTTCTGTAAGGCAAAGGACACCGTCAATAAGACAAAAAGGCCACC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTTCTGTAAGGCAAAGGACACCGTCAATAAGACAAAAAGGCCACC  600

seq1  AACAGACTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGACTGGGAAAGGATCTTTACCTATCCTAAATCAGATAGGGGACTAA  650

seq1  TATCTAATATATATAAAGAACTCATGAAGATGGACTCCAGAAAATCAGAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTAATATATATAAAGAACTCATGAAGATGGACTCCAGAAAATCAGAT  700

seq1  AACCCCATTAAAAATGGGGCTCAGAGCTAAACAAAGAATTCTCACCTGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCATTAAAAATGGGGCTCAGAGCTAAACAAAGAATTCTCACCTGAG  750

seq1  GAATACCAAATAGCTGAGAAGCACTTGAAAAAATGTTCAGCATTCTTAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATACCAAATAGCTGAGAAGCACTTGAAAAAATGTTCAGCATTCTTAAT  800

seq1  CATCAGGGAACTGCAAATCAAAAAACCCTGAGATTCCATCTCACACCAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGGGAACTGCAAATCAAAAAACCCTGAGATTCCATCTCACACCAGT  850

seq1  CAGAATGGCTAAGATAAAAAATTCAGGTGACAGCAGATGCTG  892
      ||||||||||||||| ||||||||| ||||||||||||||||
seq2  CAGAATGGCTAAGAT-AAAAATTCACGTGACAGCAGATGCTG  891

seq1: chr8_102504551_102505546
seq2: B6Ng01-095M22.g_67_963 (reverse)

seq1  TTGCAGATGCAAATCGTGAATTGTGCATGTGCGAAGGTAAATAGCTAAGA  50
      ||||||||||  |||||||  ||||||| |||    |||    ||| |||
seq2  TTGCAGATGC--ATCGTGA--TGTGCAT-TGC---AGTA---TGCT-AGA  38

seq1  TGATTATTAAAGCACAGTGGGAAAAATAGAATGCTATGTAAAATGCAAAT  100
      ||| |||  ||||||| ||     |||   |||| |||  ||||||||  
seq2  TGA-TAT--AAGCACA-TG----CAAT--GATGC-ATG--AAATGCAA--  73

seq1  GTATGGTAGCACTCTGCTTGTGAACTTTGACCTTAGTCAGTCGAATGCCA  150
      |||  ||||||||||||   || || |||| | |||||||||| ||| ||
seq2  GTA--GTAGCACTCTGC---TGGAC-TTGA-CATAGTCAGTCG-ATG-CA  114

seq1  CTGGGCTTCTTTCCTTGCTCTGTCATTTGTCCTAATGAGATTGAGATTCA  200
      ||||   ||||    |||||||||| |||||||||||||| ||||| |||
seq2  CTGG--CTCTT---CTGCTCTGTCA-TTGTCCTAATGAGA-TGAGA-TCA  156

seq1  GAATGTGGTATCAATGCCTTACACAAGACATTTGCTTACCCAGTTCAGGA  250
      | |||| ||||||||||  ||||| |||||  ||||    ||| ||||||
seq2  G-ATGT-GTATCAATGC--TACAC-AGACA--TGCT---ACAG-TCAGGA  195

seq1  AGTGAACACTTTATAAATTACCACTTCAAAGCAGGAGTCACCATCTGCAA  300
      |||| ||||| |   ||||| ||||   ||||||||||||||||||||||
seq2  AGTG-ACACTAT---AATTA-CACT--CAAGCAGGAGTCACCATCTGCAA  238

seq1  GCAGCAGGGTGAGGTGAGTTTCATGTGACAGCAGAACCATCATTTTCTTA  350
      |||||| ||||| ||||| ||||||||||||||| |||||||||    ||
seq2  GCAGCA-GGTGA-GTGAG-TTCATGTGACAGCAG-ACCATCATT---CTA  281

seq1  TGGTCCTGTTTCAGATTTTATTAAAGAAAGTCAACCTTTCTTTCTACAGG  400
      ||   ||| ||||||  |||||||   ||||||||  ||| |||||||||
seq2  TG--TCTG-TTCAGA--TTATTAA--GAAGTCAAC--TTC-TTCTACAGG  321

seq1  TGAAGGGCTTTGTTAAAGAAACAAAAAGAATTCTCCAAAATTAATCTCTT  450
      ||||||   ||||| |||||   ||||||||||||| ||||||||||| |
seq2  TGAAGG--CTTGTT-AAGAA--CAAAAGAATTCTCC-AAATTAATCTC-T  364

seq1  GAGTGTTTATTGTCAACTGGCCTAAACTCTTTTTTATTTCAGACCTGATA  500
      |||||||   |||||||||||   |||||||||    |||||| ||||||
seq2  GAGTGTT--ATGTCAACTGGC--TAACTCTTTT---ATTCAGA-CTGATA  406

seq1  CACTCATACTATATGATTTCCCAAAATGCAAATTCCCATGCCAGCTCATA  550
      ||||||||||||||||||   | |||||| ||||||||||||||||||||
seq2  CACTCATACTATATGATT---CCAAATGC-AATTCCCATGCCAGCTCATA  452

seq1  ATCCAGCACCTTAACTTTTTCAATTATGGCCTCATACATATCGGTATATG  600
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATCCAGCACCTTAAC-TTTTCAATTATGGCCTCATACATATCGGTATATG  501

seq1  AAATTAGTTTATTCTTGTGATATGTCTCACCCTCTCTCACTGAATGTCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAGTTTATTCTTGTGATATGTCTCACCCTCTCTCACTGAATGTCCT  551

seq1  TTCCTTCCTGTCTTCAATGTCATTCATGCATCTAATCACGTATTCACTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCTGTCTTCAATGTCATTCATGCATCTAATCACGTATTCACTCC  601

seq1  CTAATCTATTCATTAAAAACATTATACTTAAATGAGAATTTTCTCCTAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCTATTCATTAAAAACATTATACTTAAATGAGAATTTTCTCCTAGG  651

seq1  CAATAACCTGATATTTGAATATGAAAGAAAGAAAAAAAGAAAGAAAGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATAACCTGATATTTGAATATGAAAGAAAGAAAAAAAGAAAGAAAGAAA  701

seq1  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAAGGAAGGAAGGAAGG  751

seq1  AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAGGAA  801

seq1  GAGAGAGAGAAAGAAAGAATCAAGTATGACCCTTATCCTCATATTTAGTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAAAGAAAGAATCAAGTATGACCCTTATCCTCATATTTAGTA  851

seq1  GGAAACAAACCTTGCAAATAAGTTATCTAAACTGTCTTTGGAATTC  996
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAACAAACCTTGCAAATAAGTTATCTAAACTGTCTTTGGAATTC  897