BAC Information

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BAC

Clone NameB6Ng01-098F02
Chromosome8 (Build37)
Map Location 127,382,120 - 127,484,168
singlet/doubletdoublet
Overlap gene2810004N23Rik, Gnpat, Exoc8, Gm505, Egln1
Upstream gene1700054N08Rik, Acta1, Nup133, Abcb10, Taf5l, AK122209, LOC100042530, LOC100042535, Galnt2, Pgbd5, Cog2, Agt, Capn9, 2310022B05Rik, Ttc13, Arv1, 2310031A18Rik, LOC668444, Trim67
Downstream geneTsnax, Disc1, Sipa1l2, 4933403G14Rik, 2310079N02Rik, E330039K12Rik, BC021891
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098F02.bB6Ng01-098F02.g
ACCDH908444DH908445
length1,194114
definitionDH908444|Mus musculus domesticus DNA, BAC clone: B6Ng01-098F02, 5' end.DH908445|Mus musculus domesticus DNA, BAC clone: B6Ng01-098F02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(127,382,120 - 127,383,350)(127,484,055 - 127,484,168)
sequence
gaattctttttgattttatttgtaaccctggctgttctaggccttgctat
ataagtaaggctgaattcacttcacgatgatccttctgagttcagggaag
agaggtgtaagctatcgcacctggctgtcttcatgtactttaaagtacaa
agtcccatggctgcctctaagacctgggaagggagggcttcccagcttct
gtatgtcatctcaggtcactgtcccctctgtcctactcctgctggccttc
cagttctttgaatcagtcaggcaggcaacagggttgacaaggctgtttct
tcacctgcttatgtggcgcgcctctccctctaagcaccttcactaccgag
cattacctgcctgggcctcacttccctgaccacaatacccagagcaggct
ctgcctgctcccctcagcatcctacctgttttgtctttgttcaccactct
ttacctttataaccacaggagacaggatagcatccacacactctacagcc
tttgcttgtgtgtgtttctctccaggggtcacctcctgactccttcactg
cacacacacacacacacacacacacacacacacatacacacacacactca
cacgttctcaaaggacagagaatatttggacaagtgaaaaatataatcaa
gattaacaagttcaatgcacagaggttcctgagataatccaagtacaagg
aaaatactctcgaaggggttagagagacaaccttgcagcctgcaggcatt
ctgttcctgatggatgggaaaagccagactcacacaatgccggctattct
attaacattctattaacagacaaactttccacgctaggaaggaagcaaga
gtgagcacagaagatgctgggcctgagacacttgagggagtaaggaaggt
gccgagtcagatcgtgttagttttgaaacctgtttacaccaagatatttc
tttcgtactgccctaaactgggcacactagaaaggacaaatcttgtgagc
tctaaatagaggagatggccaagggccatcctagtgcagcttgacaggtc
actgacttaaaagtgttgcagtacgggtatgaccctggagctcctgatgc
aggcaagtgctgtatactgaagccttactcagtatgctgcttgaaacgta
gaaagtattaggccagactattcatatgccagaagaaactgctg
aaagaatgtaatagaaccccaacaggtatgaaagaaagagctgcatagac
tgtggaaagcccagtgagagtgtatgtgtgtgagtgttgtgagtttgtga
gtgtgtgtgtgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_127382120_127383350
seq2: B6Ng01-098F02.b_47_1240

seq1  GAATTCTTTTTGATTTTATTTGTAACCCTGGCTGTTCTAGGCCTTGCTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTTGATTTTATTTGTAACCCTGGCTGTTCTAGGCCTTGCTAT  50

seq1  ATAAGTAAGGCTGAATTCACTTCACGATGATCCTTCTGAGTTCAGGGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTAAGGCTGAATTCACTTCACGATGATCCTTCTGAGTTCAGGGAAG  100

seq1  AGAGGTGTAAGCTATCGCACCTGGCTGTCTTCATGTACTTTAAAGTACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGTGTAAGCTATCGCACCTGGCTGTCTTCATGTACTTTAAAGTACAA  150

seq1  AGTCCCATGGCTGCCTCTAAGACCTGGGAAGGGAGGGCTTCCCAGCTTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCCATGGCTGCCTCTAAGACCTGGGAAGGGAGGGCTTCCCAGCTTCT  200

seq1  GTATGTCATCTCAGGTCACTGTCCCCTCTGTCCTACTCCTGCTGGCCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTCATCTCAGGTCACTGTCCCCTCTGTCCTACTCCTGCTGGCCTTC  250

seq1  CAGTTCTTTGAATCAGTCAGGCAGGCAACAGGGTTGACAAGGCTGTTTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCTTTGAATCAGTCAGGCAGGCAACAGGGTTGACAAGGCTGTTTCT  300

seq1  TCACCTGCTTATGTGGCGCGCCTCTCCCTCTAAGCACCTTCACTACCGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCTGCTTATGTGGCGCGCCTCTCCCTCTAAGCACCTTCACTACCGAG  350

seq1  CATTACCTGCCTGGGCCTCACTTCCCTGACCACAATACCCAGAGCAGGCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTACCTGCCTGGGCCTCACTTCCCTGACCACAATACCCAGAGCAGGCT  400

seq1  CTGCCTGCTCCCCTCAGCATCCTACCTGTTTTGTCTTTGTTCACCACTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTGCTCCCCTCAGCATCCTACCTGTTTTGTCTTTGTTCACCACTCT  450

seq1  TTACCTTTATAACCACAGGAGACAGGATAGCATCCACACACTCTACAGCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACCTTTATAACCACAGGAGACAGGATAGCATCCACACACTCTACAGCC  500

seq1  TTTGCTTGTGTGTGTTTCTCTCCAGGGGTCACCTCCTGACTCCTTCACTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTGTGTGTGTTTCTCTCCAGGGGTCACCTCCTGACTCCTTCACTG  550

seq1  CACACACACACACACACACACACACACACACACATACACACACACACTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACATACACACACACACTCA  600

seq1  CACGTTCTCAAAGGACAGAGAATATTTGGACAAGTGAAAAATATAATCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTTCTCAAAGGACAGAGAATATTTGGACAAGTGAAAAATATAATCAA  650

seq1  GATTAACAAGTTCAATGCACAGAGGTTCCTGAGATAATCCAAGTACAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAACAAGTTCAATGCACAGAGGTTCCTGAGATAATCCAAGTACAAGG  700

seq1  AAAATACTCTCGAAGGGGTTAGAGAGACAACCTTGCAGCCTGCAGGCATT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACTCTCGAAGGGGTTAGAGAGACAACCTTGCAGCCTGCAGGCATT  750

seq1  CTGTTCCTGATGGATGGGAAAAGCCAGACTCACACAATGCCGGCTATTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCTGATGGATGGGAAAAGCCAGACTCACACAATGCCGGCTATTCT  800

seq1  ATTAACATTCTATTAACAGACAAACTTTCCACGCTAGGAAGGAAGCAAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAACATTCTATTAACAGACAAACTTTCCACGCTAGGAAGGAAGCAAGA  850

seq1  GTGAGCACAGAAGATGCTGGGCCTGAGACACTTGAGGGAGTAAGGAAGGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  GTGAGCACAGAAGATGCTGGGCCTGAGACACTTGAGGGAGTAAGGAA-GG  899

seq1  TGCCGAGTCAGATCGTGTTAGTTTTGAAACCTGTTTAACACCAAGAATAT  950
      |||||||||||||||||||||||||||||||||||| |||||||| ||||
seq2  TGCCGAGTCAGATCGTGTTAGTTTTGAAACCTGTTT-ACACCAAG-ATAT  947

seq1  TTCTTTCGTACTGCCCTAAACTGGGCACACTAGAAAGGACAAATTCTTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTCTTTCGTACTGCCCTAAACTGGGCACACTAGAAAGGACAAA-TCTTGT  996

seq1  GAGCTCCTAAAATAGGAGGAGATGGCCAAGGGCCATTCCTTAGTGCAGCT  1050
      ||||||   ||||| |||||||||||||||||||||  | ||||||||||
seq2  GAGCTC--TAAATA-GAGGAGATGGCCAAGGGCCAT--CCTAGTGCAGCT  1041

seq1  ATGACAGGTCACTGACTTAGAAGTGTTTTGCAGTACGGGGTATGGAACCC  1100
       |||||||||||||||||| |||||  ||||||||| |||||||  ||||
seq2  -TGACAGGTCACTGACTTAAAAGTG--TTGCAGTAC-GGGTATG--ACCC  1085

seq1  TGGAGCTCCCGAATGCCAGGCAAGTGCTGTATCACTGAAGCCCTCACTCC  1150
      ||||||||| | ||| |||||||||||||||| ||||||| ||| |||| 
seq2  TGGAGCTCCTG-ATG-CAGGCAAGTGCTGTAT-ACTGAAG-CCTTACTC-  1130

seq1  AAGTAATGCTGCTTAGAACAGTAAGAAAGTGGTAAATGAGGGCAAAAACA  1200
       ||| ||||||||| |||  || |||||||     || ||| || |    
seq2  -AGT-ATGCTGCTT-GAAACGT-AGAAAGT-----ATTAGGCCAGA----  1167

seq1  CCTATTCATATAGCCATGAAGAACACTGCTG  1231
       |||||||||| |||| |||||| |||||||
seq2  -CTATTCATAT-GCCA-GAAGAA-ACTGCTG  1194

seq1: chr8_127484055_127484168
seq2: B6Ng01-098F02.g_72_185 (reverse)

seq1  TCACACACACACACTCACAAACTCACAACACTCACACACATACACTCTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACACACACACTCACAAACTCACAACACTCACACACATACACTCTCA  50

seq1  CTGGGCTTTCCACAGTCTATGCAGCTCTTTCTTTCATACCTGTTGGGGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCTTTCCACAGTCTATGCAGCTCTTTCTTTCATACCTGTTGGGGTT  100

seq1  CTATTACATTCTTT  114
      ||||||||||||||
seq2  CTATTACATTCTTT  114