BAC Information

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BAC

Clone NameB6Ng01-098K05
Chromosome8 (Build37)
Map Location 91,076,357 - 91,256,772
singlet/doubletdoublet
Overlap geneNkd1, 9130017C17Rik, Nod2, Cyld
Upstream gene4933402J07Rik, Zfp423, LOC100040328, 5033428A16Rik, Heatr3, Papd5, Adcy7, Brd7, LOC100040369
Downstream geneLOC675985, Sall1, LOC100041089, EG625801, EG384862
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098K05.bB6Ng01-098K05.g
ACCDH908672DH908673
length1,172965
definitionDH908672|Mus musculus domesticus DNA, BAC clone: B6Ng01-098K05, 5' end.DH908673|Mus musculus domesticus DNA, BAC clone: B6Ng01-098K05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(91,255,601 - 91,256,772)(91,076,357 - 91,077,325)
sequence
gaattcatgtgtcaagacagcagaggcctgtgttcagccattagtgtgcc
cacagaccctgaagttccagaccacaaacacagggtaaagacatgcaaga
gaatgttttgaaaaaagcttgcttacatagtcaagaagagcctggaaatc
agcccgccctctctgtccttccttcttccctccccccttcttcacttcct
ccctctctccctccccctcctctcattccccctctctctcacacacagac
aacatggggaaaaagttggaggccactagttaggacaaatacatcttgct
ctcctgagacatgtgcttctataaaataacttgtgagtgactagcagcag
aaacttactggtatcaaagaatataacatttggcttaaacagatttttat
caggaaatctaaagaatattatagcaatactacaaggtttgtttaatcaa
aagtattacaccaacaaaaagacccccagcctttattctgttctctgctt
ttgaaatcctaccatccctgctaaccacctcgctcttgtgcacagtttac
agagcagagctggcagagcctcttagtttaactgcagtgcacaatcctta
aggccacagattcatggttcaatctttcagagtttaatgttccctgtatt
attcactccactttaggaaagtcgacacaaaggatggcaacagtgatccc
atgggaaataatttttatataaagaatttccatgatcacattgatatact
aaagtatacacatacaatgccaacagtttactgccagtttacttggttca
ttcaagtgcagtctactacattggaagcagatgcctttcatcacatctgt
ttcacgaactagcttttaaaatctatataaattaagatataaaatttgtt
aactgtcaaggaccaaatcttatgaccttttcttaactcccagtcagttt
ctctactcaaaggcaccttctttcagatacacacacacacacacacacac
acactcacacacacgttccaataaggcatatctacagttactgcagaaat
gtttactttacagaataaagttggagtctagtaacaagaattgtaatgcc
ctgaaggcctttctcctttccaatcataacccctaaaccctcctttcatt
taagggggagaattttcttcta
gaattcattctggaggattctggcagctgtcctggctgaggccactgcct
tcatcttgggtcagatggaaacataccaattactcactaagttgaatttg
ctgtgggactcaatgcaagctttctgcctggtggggatgaggggacaaaa
ggtactggggctgtgccttaggaccccagctgtaaggacctggggctaga
ccacatgcaggaggtcagaagttgtggttgatgaacttgctgtccttgga
agaatgtttttttctcattttgaacttgggcagacctggaactattttaa
ccaataggaggaggccatggaaagggatgcccagggaggcttgggaatat
tctcctctgtggtcctgttgtccatattggccaatggagaagttgagtca
tcttgctagaagagctgtgtgtggggactccaaggctgaatggagcagag
agaagcccaattatctcggccttttagctgtcccagtagtgtgccagaaa
caaagtgaaccacttcagggtgccagtcaggccaagctcccagtgactca
actggaacctgcagcatttctcagtgaagccgagtagtccgaagcatcca
gagatggctacagggccagggtaagcctctagattcgaagtggttcttgt
acaacagatccaaaacctttggcttcatgtcagtagggtgtggaagaagt
gtgtcctgtcacttgtcctgcggaacattgcctcctgagtaactgagtaa
cccatgcttctagttccgggctgtgcacatgtgtggcagccaacagtcat
gtgctagagtgaagatcacctcttcttgtgacacgagtacagccaggaca
cacacaaagccctctgtggttaatgagtttattctccaagtagggaatgg
ctgcagcatcagtagtctggagatctgagatccaaatgcctcaaagtcta
aacctctgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_91255601_91256772
seq2: B6Ng01-098K05.b_44_1215 (reverse)

seq1  TAGAAGAAAATACTCCACCTAAAATGGAAAAGGAAGGTTTAGAGATAATG  50
      ||||||||||| |||| ||| |||||  |||||| ||||||| | | |||
seq2  TAGAAGAAAATTCTCCCCCTTAAATG--AAAGGAGGGTTTAGGGGTTATG  48

seq1  ATTGGAAAGAAGAAAGGCATCCAGGGCCATTACAATTCTTGTTACTTAGA  100
      ||||||||| |||||||| | ||||| |||||||||||||||||| ||||
seq2  ATTGGAAAGGAGAAAGGCCTTCAGGG-CATTACAATTCTTGTTAC-TAGA  96

seq1  CT-CAACTTTATTCTGGTAAGTACACATTTTCTGCAGTAACTGTAGATAG  149
      || |||||||||||||  ||||| ||| ||||||||||||||||||||| 
seq2  CTCCAACTTTATTCTGTAAAGTAAACA-TTTCTGCAGTAACTGTAGATA-  144

seq1  TGCCTTATTGGGACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  199
      ||||||||||| ||||||||||| ||||||||||||||||||||||||||
seq2  TGCCTTATTGGAACGTGTGTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGT  194

seq1  ATCTGAAAGGAGGTGCCTTTGAGTAGAGAAACTGACTGGGAGTTAAG-AA  248
      ||||||||| ||||||||||||||||||||||||||||||||||||| ||
seq2  ATCTGAAAGAAGGTGCCTTTGAGTAGAGAAACTGACTGGGAGTTAAGAAA  244

seq1  AGGTCATAAGATTTGGTCCTTGACAGTTAACAAATTTTATATCTT-ATTT  297
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  AGGTCATAAGATTTGGTCCTTGACAGTTAACAAATTTTATATCTTAATTT  294

seq1  ATATAGATTTTAAAAGCTAGTTCGTG-AACAGATGTGATG-AAGGCATCT  345
      |||||||||||||||||||||||||| ||||||||||||| |||||||||
seq2  ATATAGATTTTAAAAGCTAGTTCGTGAAACAGATGTGATGAAAGGCATCT  344

seq1  GCTTCCAATGTAGTAGACTGCACTTGAATGAACCAAGT-AACTGGCAGTA  394
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GCTTCCAATGTAGTAGACTGCACTTGAATGAACCAAGTAAACTGGCAGTA  394

seq1  AACTGTTGGCATTGTATGTGTATACTTTAGTATATCAATGTGATCATGGA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTTGGCATTGTATGTGTATACTTTAGTATATCAATGTGATCATGGA  444

seq1  AATTCTTTATATTAAAAATTATTTCCCATGGGATCACTGTTGCCATCCTT  494
      ||||||||||| ||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTTATA-TAAAAATTATTTCCCATGGGATCACTGTTGCCATCCTT  493

seq1  TGTGTCGACTTTCCTAAAGTGGAGTGAATAATACAGGGAACATTAAACTC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCGACTTTCCTAAAGTGGAGTGAATAATACAGGGAACATTAAACTC  543

seq1  TG-AAGATTGAACCATGAATCTGTGGCCTTAAGGATTGTGCACTGCAGTT  593
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGATTGAACCATGAATCTGTGGCCTTAAGGATTGTGCACTGCAGTT  593

seq1  AAACTAAGAGGCTCTGCCAGCTCTGCTCTGTAAACTGTGCACAAGAGCGA  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAGAGGCTCTGCCAGCTCTGCTCTGTAAACTGTGCACAAGAGCGA  643

seq1  GGTGGTTAGCAGGGATGGTAGGATTTCAAAAGCAGAGAACAGAATAAAGG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTTAGCAGGGATGGTAGGATTTCAAAAGCAGAGAACAGAATAAAGG  693

seq1  CTGGGGGTCTTTTTGTTGGTGTAATACTTTTGATTAAACAAACCTTGTAG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGGGTCTTTTTGTTGGTGTAATACTTTTGATTAAACAAACCTTGTAG  743

seq1  TATTGCTATAATATTCTTTAGATTTCCTGATAAAAATCTGTTTAAGCCAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGCTATAATATTCTTTAGATTTCCTGATAAAAATCTGTTTAAGCCAA  793

seq1  ATGTTATATTCTTTGATACCAGTAAGTTTCTGCTGCTAGTCACTCACAAG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTATATTCTTTGATACCAGTAAGTTTCTGCTGCTAGTCACTCACAAG  843

seq1  TTATTTTATAGAAGCACATGTCTCAGGAGAGCAAGATGTATTTGTCCTAA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTATAGAAGCACATGTCTCAGGAGAGCAAGATGTATTTGTCCTAA  893

seq1  CTAGTGGCCTCCAACTTTTTCCCCATGTTGTCTGTGTGTGAGAGAGAGGG  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTGGCCTCCAACTTTTTCCCCATGTTGTCTGTGTGTGAGAGAGAGGG  943

seq1  GGAATGAGAGGAGGGGGAGGGAGAGAGGGAGGAAGTGAAGAAGGGGGGAG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGAGAGGAGGGGGAGGGAGAGAGGGAGGAAGTGAAGAAGGGGGGAG  993

seq1  GGAAGAAGGAAGGACAGAGAGGGCGGGCTGATTTCCAGGCTCTTCTTGAC  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAGGAAGGACAGAGAGGGCGGGCTGATTTCCAGGCTCTTCTTGAC  1043

seq1  TATGTAAGCAAGCTTTTTTCAAAACATTCTCTTGCATGTCTTTACCCTGT  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTAAGCAAGCTTTTTTCAAAACATTCTCTTGCATGTCTTTACCCTGT  1093

seq1  GTTTGTGGTCTGGAACTTCAGGGTCTGTGGGCACACTAATGGCTGAACAC  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGTGGTCTGGAACTTCAGGGTCTGTGGGCACACTAATGGCTGAACAC  1143

seq1  AGGCCTCTGCTGTCTTGACACATGAATTC  1172
      |||||||||||||||||||||||||||||
seq2  AGGCCTCTGCTGTCTTGACACATGAATTC  1172

seq1: chr8_91076357_91077325
seq2: B6Ng01-098K05.g_66_1030

seq1  GAATTCATTCTGGAGGATTCTGGCAGCTGTCCTGGCTGAGGCCACTGCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTCTGGAGGATTCTGGCAGCTGTCCTGGCTGAGGCCACTGCCT  50

seq1  TCATCTTGGGTCAGATGGAAACATACCAATTACTCACTAAGTTGAATTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTTGGGTCAGATGGAAACATACCAATTACTCACTAAGTTGAATTTG  100

seq1  CTGTGGGACTCAATGCAAGCTTTCTGCCTGGTGGGGATGAGGGGACAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGGGACTCAATGCAAGCTTTCTGCCTGGTGGGGATGAGGGGACAAAA  150

seq1  GGTACTGGGGCTGTGCCTTAGGACCCCAGCTGTAAGGACCTGGGGCTAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTACTGGGGCTGTGCCTTAGGACCCCAGCTGTAAGGACCTGGGGCTAGA  200

seq1  CCACATGCAGGAGGTCAGAAGTTGTGGTTGATGAACTTGCTGTCCTTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACATGCAGGAGGTCAGAAGTTGTGGTTGATGAACTTGCTGTCCTTGGA  250

seq1  AGAATGTTTTTTTCTCATTTTGAACTTGGGCAGACCTGGAACTATTTTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATGTTTTTTTCTCATTTTGAACTTGGGCAGACCTGGAACTATTTTAA  300

seq1  CCAATAGGAGGAGGCCATGGAAAGGGATGCCCAGGGAGGCTTGGGAATAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATAGGAGGAGGCCATGGAAAGGGATGCCCAGGGAGGCTTGGGAATAT  350

seq1  TCTCCTCTGTGGTCCTGTTGTCCATATTGGCCAATGGAGAAGTTGAGTCA  400
      ||||||||||||||||                 |||||||||||||||||
seq2  TCTCCTCTGTGGTCCTNNNNNNNNNNNNNNNNNATGGAGAAGTTGAGTCA  400

seq1  TCTTGCTAGAAGAGCTGTGTGTGGGGACTCCAAGGCTGAATGGAGCAGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGCTAGAAGAGCTGTGTGTGGGGACTCCAAGGCTGAATGGAGCAGAG  450

seq1  AGAAGCCCAATTATCTCGGCCTTTTAGCTGTCCCAGTAGTGTGCCAGAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCCAATTATCTCGGCCTTTTAGCTGTCCCAGTAGTGTGCCAGAAA  500

seq1  CAAAGTGAACCACTTCAGGGTGCCAGTCAGGCCAAGCTCCCAGTGACTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTGAACCACTTCAGGGTGCCAGTCAGGCCAAGCTCCCAGTGACTCA  550

seq1  ACTGGAACCTGCAGCATTTCTCAGTGAAGCCGAGTAGTCCGAAGCATCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGAACCTGCAGCATTTCTCAGTGAAGCCGAGTAGTCCGAAGCATCCA  600

seq1  GAGATGGCTACAGGGCCAGGGTAAGCCTCTAGATTCGAAGTGGTTCTTGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGCTACAGGGCCAGGGTAAGCCTCTAGATTCGAAGTGGTTCTTGT  650

seq1  ACAACAGATCCAAAACCTTTGGCTTCATGTCAGTAGGGTGTGGAAGAAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACAGATCCAAAACCTTTGGCTTCATGTCAGTAGGGTGTGGAAGAAGT  700

seq1  GTGTCCTGTCACTTGTCCTGCGGAACATTGCCTCCTGAGTAACTGAGTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCTGTCACTTGTCCTGCGGAACATTGCCTCCTGAGTAACTGAGTAA  750

seq1  CCCATGCTTCTAGTTCCGGGCTGTGCACATGTGTGGCAGGCCAACAGTCA  800
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCCATGCTTCTAGTTCCGGGCTGTGCACATGTGTGGCA-GCCAACAGTCA  799

seq1  TGTGCTAGAGTTGAAGATCACCTCTTCTTGTGACACGAGTACAGCCAGGA  850
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TGTGCTAGAG-TGAAGATCACCTCTTCTTGTGACACGAGTACAGCCAGGA  848

seq1  CACACACAAAGCCCTCTGTGGTTTAATGAGTTTATTCTCCAAGTAGGGAA  900
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CACACACAAAGCCCTCTGTGG-TTAATGAGTTTATTCTCCAAGTAGGGAA  897

seq1  TGGCTGCAGCATCAGTAGTCTGGAGATCTGAGATCCAAAATGCCTCAAAG  950
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TGGCTGCAGCATCAGTAGTCTGGAGATCTGAGATCC-AAATGCCTCAAAG  946

seq1  TCTAAAACTCTGTGTGTGT  969
      |||||| ||||||||||||
seq2  TCTAAACCTCTGTGTGTGT  965