BAC Information

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BAC

Clone NameB6Ng01-098N10
Chromosome8 (Build37)
Map Location 96,695,805 - 96,881,928
singlet/doubletdoublet
Overlap geneMt2, Mt1, Nup93, LOC100041555, Slc12a3
Upstream geneCes3, Es22, AU018778, Ces1, 2310039D24Rik, Ces7, Gnao1, Amfr, Nudt21, Ogfod1, Bbs2, Mt4, Mt3
Downstream geneHerpud1, EG434339, AI451557, Cpne2, 2310065K24Rik, Rspry1, Arl2bp, Pllp, Ccl22, Cx3cl1, 1700121C10Rik, Ccl17, Ciapin1, LOC664947, Coq9, Polr2c, Dok4, LOC100040942, Ccdc102a, Gpr114, Gpr56, Gpr97, Gm770, Katnb1, Kifc3, BC016201, Map1lc3-ps6, 1700055M20Rik, Zfp319, AA960436, Mmp15
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098N10.bB6Ng01-098N10.g
ACCDH908805DH908806
length662976
definitionDH908805|Mus musculus domesticus DNA, BAC clone: B6Ng01-098N10, 5' end.DH908806|Mus musculus domesticus DNA, BAC clone: B6Ng01-098N10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(96,695,805 - 96,696,466)(96,880,951 - 96,881,928)
sequence
gaattccacctccagcaaagacccccaccattttttcctgtcactcgctg
ccctccccccgccccccaagagtaagtcttagcacaaggcttgtgtctat
ggtctctagtctcttgacaactggctggtgccttagtggattcgaaccct
acactcatcttgggcaagtgactatgtgactgcgtctccgtttccacttt
tctacggtgagaataatgaacactccaaccagcgtttgtaaggaaaaacg
acagctcttacggtgcccgcagcacgtgacacgcaggggggcaggagtac
atcaccaacagcagttaagccaggggtagggctggtttttgtaaccggtt
cacactgccagctaagttttcctgtacgcagggtctccaagccccgcttt
cacccaggttagcacacaagacatgcgcggaaactgtgtccccgtggcgt
gatctgggcggccagaggtctcgtcgctcagcatcgcctctgcacccggc
ccctcgggccccggggcaccgcaaagggcgcgcgcgggagcaagcaggtg
tcctggaaccggttcccaccggatcgcagaccctttgcgctcagctcctt
tgctctcagtccctgagcccagagaaagggggtgtgactcagcgcggggg
gtggggggaggg
gaattcaaatgagctaactcacagctcagtgccaggcaacgggcctggct
catggaagatcctctgtataaaagactgggggactcagcttcctcagggg
cagaacttgggctgtctttagataccctgcttatttaggagtttctacag
agccagctggtgccaggctgggaaaacattccagatcccagggtgcttgg
tgctggctgggagacacaccttaaggctgccccgtgcccctcagaaatga
ggtgaactccccagacctgagagtggatagatactttctgttgagaaagg
aatccgaggaaagagggttaacccagtctgggactctcactgtctcaccg
tggacatcttggatgcccaattctttgctgtgagggctgccctgtgtctt
gtaggacatttagcagcgcccacggtctctgtaatacataacagctgtag
cgtacatcccttgatgtgacctccaaaaatatctctagacagttgacaga
tgtccctgctggaggagggtggcaagtggcccctagctcaggaccactga
gaggagaactgagacctgccccagagtgtttggctgacactgactcttta
tctactccaactaaaaatatcactgcaatgtcaaaagagcctcgtgcctg
ccgtacacacagctctggaagatcaccaccaatggccagaaccacttaca
ttataggagggtcagtctccccaccggggacagcatgagactctgccctc
tcatgtggcccaagaacatctcagacattgctagggtgaatagggtggag
tcaagtagggattccagaagcccagggatggggagacatgctggaacccc
agaccctggcaagccccttccctctcttgaaccttaattctgttcctgtt
atctcttcatctgagatcttccagggacagtccctcctcatcctcagtga
cggtgcctcgtccttgaagccatcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr8_96695805_96696466
seq2: B6Ng01-098N10.b_46_707

seq1  GAATTCCACCTCCAGCAAAGACCCCCACCATTTTTTCCTGTCACTCGCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACCTCCAGCAAAGACCCCCACCATTTTTTCCTGTCACTCGCTG  50

seq1  CCCTCCCCCCGCCCCCCAAGAGTAAGTCTTAGCACAAGGCTTGTGTCTAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCCCCCCGCCCCCCAAGAGTAAGTCTTAGCACAAGGCTTGTGTCTAT  100

seq1  GGTCTCTAGTCTCTTGACAACTGGCTGGTGCCTTAGTGGATTCGAACCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTCTAGTCTCTTGACAACTGGCTGGTGCCTTAGTGGATTCGAACCCT  150

seq1  ACACTCATCTTGGGCAAGTGACTATGTGACTGCGTCTCCGTTTCCACTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCATCTTGGGCAAGTGACTATGTGACTGCGTCTCCGTTTCCACTTT  200

seq1  TCTACGGTGAGAATAATGAACACTCCAACCAGCGTTTGTAAGGAAAAACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACGGTGAGAATAATGAACACTCCAACCAGCGTTTGTAAGGAAAAACG  250

seq1  ACAGCTCTTACGGTGCCCGCAGCACGTGACACGCAGGGGGGCAGGAGTAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTCTTACGGTGCCCGCAGCACGTGACACGCAGGGGGGCAGGAGTAC  300

seq1  ATCACCAACAGCAGTTAAGCCAGGGGTAGGGCTGGTTTTTGTAACCGGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACCAACAGCAGTTAAGCCAGGGGTAGGGCTGGTTTTTGTAACCGGTT  350

seq1  CACACTGCCAGCTAAGTTTTCCTGTACGCAGGGTCTCCAAGCCCCGCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTGCCAGCTAAGTTTTCCTGTACGCAGGGTCTCCAAGCCCCGCTTT  400

seq1  CACCCAGGTTAGCACACAAGACATGCGCGGAAACTGTGTCCCCGTGGCGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCAGGTTAGCACACAAGACATGCGCGGAAACTGTGTCCCCGTGGCGT  450

seq1  GATCTGGGCGGCCAGAGGTCTCGTCGCTCAGCATCGCCTCTGCACCCGGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGGGCGGCCAGAGGTCTCGTCGCTCAGCATCGCCTCTGCACCCGGC  500

seq1  CCCTCGGGCCCCGGGGCACCGCAAAGGGCGCGCGCGGGAGCAAGCAGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCGGGCCCCGGGGCACCGCAAAGGGCGCGCGCGGGAGCAAGCAGGTG  550

seq1  TCCTGGAACCGGTTCCCACCGGATCGCAGACCCTTTGCGCTCAGCTCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGAACCGGTTCCCACCGGATCGCAGACCCTTTGCGCTCAGCTCCTT  600

seq1  TGCTCTCAGTCCCTGAGCCCAGAGAAAGGGGGTGTGACTCAGCGCGGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTCAGTCCCTGAGCCCAGAGAAAGGGGGTGTGACTCAGCGCGGGGG  650

seq1  GTGGGGGGAGGG  662
      ||||||||||||
seq2  GTGGGGGGAGGG  662

seq1: chr8_96880951_96881928
seq2: B6Ng01-098N10.g_68_1043 (reverse)

seq1  ATGATGGCTTCAAGGACGAGGCCACCGTCACTGA-GATGAGGAGGGACTG  49
      ||||||||||||||||||||| |||||||||||| |||||||||||||||
seq2  ATGATGGCTTCAAGGACGAGG-CACCGTCACTGAGGATGAGGAGGGACTG  49

seq1  TCCCTGGAAGATCTCAGATGAAGAGATTAACAAGAACAGAATTAAGGTTC  99
      |||||||||||||||||||||||||| ||||| |||||||||||||||||
seq2  TCCCTGGAAGATCTCAGATGAAGAGA-TAACAGGAACAGAATTAAGGTTC  98

seq1  AAGAGAGGGAAGGGGCTTGCCAGGGTCTGGGGTTCCAGCATGTCTCCCCA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGAGGGAAGGGGCTTGCCAGGGTCTGGGGTTCCAGCATGTCTCCCCA  148

seq1  TCCCTGGGCTTCTGGAATCCCTACTTGACTCCACCCTATTCACCCTTAGC  199
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TCCCTGGGCTTCTGGAATCCCTACTTGACTCCACCCTATTCACCC-TAGC  197

seq1  AATGTCTGAGATGTTCTTGGGCCACATGAGAGGGCAGAGTCTCATGCTGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCTGAGATGTTCTTGGGCCACATGAGAGGGCAGAGTCTCATGCTGT  247

seq1  CCCCGGTGGGGAGACTGACCCTCCTATAATGTAAGTGGTTCTGGCCATTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCGGTGGGGAGACTGACCCTCCTATAATGTAAGTGGTTCTGGCCATTG  297

seq1  GTGGTGATCTTCCAGAGCTGTGTGTACGGCAGGCACGAGGCTCTTTTGAC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTGATCTTCCAGAGCTGTGTGTACGGCAGGCACGAGGCTCTTTTGAC  347

seq1  ATTGCAGTGATATTTTTAGTTGGAGTAGATAAAGAGTCAGTGTCAGCCAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAGTGATATTTTTAGTTGGAGTAGATAAAGAGTCAGTGTCAGCCAA  397

seq1  ACACTCTGGGGCAGGTCTCAGTTCTCCTCTCAGTGGTCCTGAGCTAGGGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTCTGGGGCAGGTCTCAGTTCTCCTCTCAGTGGTCCTGAGCTAGGGG  447

seq1  CCACTTGCCACCCTCCTCCAGCAGGGACATCTGTCAACTGTCTAGAGATA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTTGCCACCCTCCTCCAGCAGGGACATCTGTCAACTGTCTAGAGATA  497

seq1  TTTTTGGAGGTCACATCAAGGGATGTACGCTACAGCTGTTATGTATTACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTGGAGGTCACATCAAGGGATGTACGCTACAGCTGTTATGTATTACA  547

seq1  GAGACCGTGGGCGCTGCTAAATGTCCTACAAGACACAGGGCAGCCCTCAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCGTGGGCGCTGCTAAATGTCCTACAAGACACAGGGCAGCCCTCAC  597

seq1  AGCAAAGAATTGGGCATCCAAGATGTCCACGGTGAGACAGTGAGAGTCCC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAGAATTGGGCATCCAAGATGTCCACGGTGAGACAGTGAGAGTCCC  647

seq1  AGACTGGGTTAACCCTCTTTCCTCGGATTCCTTTCTCAACAGAAAGTATC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGGGTTAACCCTCTTTCCTCGGATTCCTTTCTCAACAGAAAGTATC  697

seq1  TATCCACTCTCAGGTCTGGGGAGTTCACCTCATTTCTGAGGGGCACGGGG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCACTCTCAGGTCTGGGGAGTTCACCTCATTTCTGAGGGGCACGGGG  747

seq1  CAGCCTTAAGGTGTGTCTCCCAGCCAGCACCAAGCACCCTGGGATCTGGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTTAAGGTGTGTCTCCCAGCCAGCACCAAGCACCCTGGGATCTGGA  797

seq1  ATGTTTTCCCAGCCTGGCACCAGCTGGCTCTGTAGAAACTCCTAAATAAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTTCCCAGCCTGGCACCAGCTGGCTCTGTAGAAACTCCTAAATAAG  847

seq1  CAGGGTATCTAAAGACAGCCCAAGTTCTGCCCCTGAGGAAGCTGAGTCCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGTATCTAAAGACAGCCCAAGTTCTGCCCCTGAGGAAGCTGAGTCCC  897

seq1  CCAGTCTTTTATACAGAGGATCTTCCATGAGCCAGGCCCGTTGCCTGGCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTTTTATACAGAGGATCTTCCATGAGCCAGGCCCGTTGCCTGGCA  947

seq1  CTGAGCTGTGAGTTAGCTCATTTGAATTC  978
      |||||||||||||||||||||||||||||
seq2  CTGAGCTGTGAGTTAGCTCATTTGAATTC  976